Details from NCBI annotation

Gene Symbol Lhx3
Gene Name LIM homeobox 3, transcript variant X1
Entrez Gene ID 101723708

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LHX3 ENSCPOG00000007109 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006408, Guinea pig)

Protein Percentage 93.28%
CDS Percentage 90.96%
Ka/Ks Ratio 0.03758 (Ka = 0.0274, Ks = 0.728)

LHX3 ENSG00000107187 (Human)

Gene Details

LIM homeobox 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000360811, Human)

Protein Percentage 93.28%
CDS Percentage 90.55%
Ka/Ks Ratio 0.03941 (Ka = 0.0292, Ks = 0.7405)

Lhx3 ENSMUSG00000026934 (Mouse)

Gene Details

LIM homeobox protein 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028302, Mouse)

Protein Percentage 90.05%
CDS Percentage 85.99%
Ka/Ks Ratio 0.04351 (Ka = 0.0468, Ks = 1.0745)

Lhx3 ENSRNOG00000018427 (Rat)

Gene Details

Protein Lhx3; RCG45383, isoform CRA_a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000044069, Rat)

Protein Percentage 90.55%
CDS Percentage 85.82%
Ka/Ks Ratio 0.03823 (Ka = 0.0434, Ks = 1.1351)

Genome Location

Sequence Coding sequence

Length: 1209 bp    Location: 1434238..1429384   Strand: -
>XM_004848890.1
ATGGAGGCGCACTCGGAGCTGGAGCCGGCGCGGGAGTCCGCGGGGGGCGACCTGCTCCTGGCGCTGCTGGCGCGGGGGGCGGACCTGCGCCGAGAGATCCCGCTGTGTGCCGGCTGTGACCAGCACATCCTGGACCGCTTCGTCCTGAAGGCTCTGGACCGGCACTGGCACAGCAAGTGCCTCAAGTGCAGCGACTGCCACACGCCGCTGGCCGAGCGCTGCTTCAGCCGGGGCGAGAGCGTGTATTGCAAGGACGACTTCTTCAAGCGCTTCGGGACCAAGTGCGCTGCGTGCCAGCTGGGCATCCCGCCCACGCAGGTGGTGCGCCGGGCCCAGGACTTCGTGTACCACCTGCACTGCTTCGCCTGCGTGGTGTGCAAGCGGCAGCTGGCCACGGGCGACGAGTTCTACCTCATGGAGGACAGCCGGCTGGTGTGCAAGGCCGACTACGAGACAGCCAAGCAGCGAGAGGCCGAGGCCACCGCCAAGAGGCCGCGCACGACCATCACGGCCAAGCAGCTGGAGACGCTGAAGAGCGCGTACAACGCCTCTCCCAAGCCCGCGCGCCACGTGCGCGAGCAGCTGTCCTCGGAGACCGGGCTGGACATGCGCGTCGTGCAGGTCTGGTTCCAGAACCGCCGGGCCAAGGAGAAAAGGCTGAAGAAGGACGCCGGCCGGCAGCGCTGGGGACAGTACTTCCGCAACATGAAGCGCTCCCGGGGCAGCTCCAAGTCAGACAAGGACAGCGTCCAGGAGGGGCAGGACAGCGACGCCGAGGTCTCCTTCAATGAGGAGCCGACCCTGGCGGAAATGGGCCCAGCCAGCAGCCTGTACGGAGGCCTGAGGGAGCCTACCCCCACCCTGGGCCGGCCCTCGGGTGCCCTGGGCAGCTTCGCGCTGGAGCACGGAGGTCTGGCAGGCCCAGAACCGTACGGAGAGCTGCGCCCTGGCAGCCCCTACGGCATCGCCCCGTCCCCTGCCGCCCCGCAGAGCCTCCCTGGCCCCCAGCCCCTGCTCTCCAGCCTGCTGTACCCTGACACCAGCCTGGGCCTCGTGCCCTCGGGAGCCCCAGGGGGCACCCCGGCCATGAGGGGGCTGGCGGGGAACGGACCCAGCTCCGACCTGTCCACGGGGAGCAGCGGGGGTTACCCCGACTTCCCTGCCAGCCCGGCCTCCTGGCTGGACGAGGTGGATCACGGCCAGTTCTGA

Related Sequences

XP_004848947.1 Protein

Lhx3 PREDICTED: LIM/homeobox protein Lhx3 isoform X1 [Heterocephalus glaber]

Length: 402 aa      View alignments
>XP_004848947.1
MEAHSELEPARESAGGDLLLALLARGADLRREIPLCAGCDQHILDRFVLKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQREAEATAKRPRTTITAKQLETLKSAYNASPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGSSKSDKDSVQEGQDSDAEVSFNEEPTLAEMGPASSLYGGLREPTPTLGRPSGALGSFALEHGGLAGPEPYGELRPGSPYGIAPSPAAPQSLPGPQPLLSSLLYPDTSLGLVPSGAPGGTPAMRGLAGNGPSSDLSTGSSGGYPDFPASPASWLDEVDHGQF