Details from NCBI annotation

Gene Symbol Lcn9
Gene Name lipocalin 9, transcript variant X8
Entrez Gene ID 101716840

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LCN9 ENSCPOG00000025528 (Guinea pig)

Gene Details

lipocalin 9

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014939, Guinea pig)

Protein Percentage 63.22%
CDS Percentage 77.97%
Ka/Ks Ratio 0.40331 (Ka = 0.2434, Ks = 0.6036)

LCN9 ENSG00000148386 (Human)

Gene Details

lipocalin 9

External Links

Gene Match (Ensembl Protein ID: ENSP00000277526, Human)

Protein Percentage 50.31%
CDS Percentage 67.69%
Ka/Ks Ratio 0.42113 (Ka = 0.4021, Ks = 0.9549)

Lcn9 ENSMUSG00000023210 (Mouse)

Gene Details

lipocalin 9

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023978, Mouse)

Protein Percentage 54.24%
CDS Percentage 67.04%
Ka/Ks Ratio 0.34998 (Ka = 0.3965, Ks = 1.1328)

Lcn9 ENSRNOG00000027821 (Rat)

Gene Details

lipocalin 9 (Lcn9), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000047057, Rat)

Protein Percentage 48.88%
CDS Percentage 67.6%
Ka/Ks Ratio 0.48519 (Ka = 0.4127, Ks = 0.8506)

Genome Location

Sequence Coding sequence

Length: 537 bp    Location: 1143473..1145292   Strand: +
>XM_004848871.1
ATGCTGCTGCTCCTGCTGGGTCTGGTGCTGAGCCTGGCCTTGGCCCAGAAGCTCTACCCCGAGGAGATTGTGGAGCAAGACTTCAACATGACCAGGGCCGCAGGGTCCTGGTCCTCCATCTCCTTGGCCTCTGACAACGTGATGTGGATCGGAGTCAATGGGGACCTGCACCTCTTCATTCGGACCATCGAGCTGCTACTGAACAGCAGCCTCCTGTTTCATTTCCGCTTCTGGATGCAGGGGGAATGTGTGTTCGTGACTGTGGTCTGCGAGAAGACACCAAAGAACGCAGAGTTCTCCACTGTCTACCGGGGGGAAAACAAGGTGCTCATCTTGGAGACTGACTACTGGATGTACATCATCTTCTACCTGAAGAACGTCCGGTTCGGCATCGAGACCCAAGTGCTGGCGCTCTACGGGCGCATCCCAGTGCTCAGCGACCCCTTGCTGGACAGATTTGAAAAGGCCTACAGGAAGTACGGGATGGGTCCAAGAAACACCATCAATCTGGCCGAGAAAGATCTCTGCCAGTACTAG

Related Sequences

XP_004848928.1 Protein

Lcn9 PREDICTED: epididymal-specific lipocalin-9 isoform X8 [Heterocephalus glaber]

Length: 178 aa      View alignments
>XP_004848928.1
MLLLLLGLVLSLALAQKLYPEEIVEQDFNMTRAAGSWSSISLASDNVMWIGVNGDLHLFIRTIELLLNSSLLFHFRFWMQGECVFVTVVCEKTPKNAEFSTVYRGENKVLILETDYWMYIIFYLKNVRFGIETQVLALYGRIPVLSDPLLDRFEKAYRKYGMGPRNTINLAEKDLCQY