Details from NCBI annotation

Gene Symbol Ptgds
Gene Name prostaglandin D2 synthase 21kDa (brain), transcript variant X3
Entrez Gene ID 101699559

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTGDS ENSCPOG00000007551 (Guinea pig)

Gene Details

prostaglandin D2 synthase 21kDa (brain)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006811, Guinea pig)

Protein Percentage 84.82%
CDS Percentage 85.51%
Ka/Ks Ratio 0.12796 (Ka = 0.0844, Ks = 0.6596)

PTGDS ENSG00000107317 (Human)

Gene Details

prostaglandin D2 synthase 21kDa (brain)

External Links

Gene Match (Ensembl Protein ID: ENSP00000360687, Human)

Protein Percentage 71.66%
CDS Percentage 81.11%
Ka/Ks Ratio 0.26838 (Ka = 0.1674, Ks = 0.6237)

Ptgds ENSMUSG00000015090 (Mouse)

Gene Details

prostaglandin D2 synthase (brain)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000015234, Mouse)

Protein Percentage 65.59%
CDS Percentage 74.55%
Ka/Ks Ratio 0.21179 (Ka = 0.2267, Ks = 1.0702)

Ptgds ENSRNOG00000015550 (Rat)

Gene Details

prostaglandin D2 synthase (brain) (Ptgds), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020926, Rat)

Protein Percentage 62.9%
CDS Percentage 72.4%
Ka/Ks Ratio 0.21904 (Ka = 0.2576, Ks = 1.1761)

Genome Location

Sequence Coding sequence

Length: 780 bp    Location: 923283..921260   Strand: -
>XM_004848807.1
ATGCAGCTGCAGCTGGCCTGGCCACCCTGCCCCCCCCACGTCACGAGCCTGAGTGGGCTGTCCTTGGGCCTGGGCGCAGGCCAAGCCTGGCCAATAAATAGGGGTCTCTCTGGTGCCCTCGGCTGCTCCTGCCGCCCCCTGCTCTGTGCGCACTGCTGGCACCAGGCCCCGACACCTGCCGGCACCACAATGGCCTCTCTGGGCTCACTGTGGACCGGGCTGGTCCTGCTGGGAGTGCTAGGGGTCCTGGGGGTCCTGCAGACTGCAGCCCAGGCCCAGACCTCCTTGCAGTCCGACTTCCAACAGGACAAGTTCTTGGGGCACTGGTTCAGCGCGGGCCTCGCCTCCAACTCGAGCTGGTTCCGGGAAAAGAAGGCGTCAATGTCCATGTGCTCGACCGTGGTGACCCCCCGCGAGGACGGTGGCCTCAACCTCACTTCTACCTTCCTCAGGAAGGACCAGTGTGAGACCCGGACCATGCAGCTGTGGCCCGCGGAGACCCCCGGCTCCTACAGCTACCACAGTCCACGCTGGGGCCGCACCTCCCTGATCTCTGTGGTGGAGATCAACTACAATGAGTATGCACTGCTGGACACCAAGGGCATTGACCATGACTTCCGCATGGCCACGCTCTACAGCCGCACCCAGACCCCGAGGGCTGAGCTGAAGGAGAAATTCTCTGCCTTCTGCAAGGCCCAGGGCTTCACAGAGGACACCATTGTCTTCCCACCCCAAACAGGTTGGGGGCTGCTCTGCCCAGAGGGATTAGGGTTGGATTAG

Related Sequences

XP_004848864.1 Protein

Ptgds PREDICTED: prostaglandin-H2 D-isomerase isoform X3 [Heterocephalus glaber]

Length: 259 aa      View alignments
>XP_004848864.1
MQLQLAWPPCPPHVTSLSGLSLGLGAGQAWPINRGLSGALGCSCRPLLCAHCWHQAPTPAGTTMASLGSLWTGLVLLGVLGVLGVLQTAAQAQTSLQSDFQQDKFLGHWFSAGLASNSSWFREKKASMSMCSTVVTPREDGGLNLTSTFLRKDQCETRTMQLWPAETPGSYSYHSPRWGRTSLISVVEINYNEYALLDTKGIDHDFRMATLYSRTQTPRAELKEKFSAFCKAQGFTEDTIVFPPQTGWGLLCPEGLGLD