Sequence details NCBI ID: XM_004848779.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Grin1
Gene Name glutamate receptor, ionotropic, N-methyl D-aspartate 1, transcript variant X9
Entrez Gene ID 101720185

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NR1 ENSCPOG00000012581 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011318, Guinea pig)

Protein Percentage 94.47%
CDS Percentage 90.21%
Ka/Ks Ratio 0.07376 (Ka = 0.0399, Ks = 0.5411)

GRIN1 ENSG00000176884 (Human)

Gene Details

glutamate receptor, ionotropic, N-methyl D-aspartate 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000360608, Human)

Protein Percentage 94.97%
CDS Percentage 89.45%
Ka/Ks Ratio 0.03713 (Ka = 0.0322, Ks = 0.8673)

Grin1 ENSMUSG00000026959 (Mouse)

Gene Details

glutamate receptor, ionotropic, NMDA1 (zeta 1)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028335, Mouse)

Protein Percentage 93.8%
CDS Percentage 86.47%
Ka/Ks Ratio 0.04591 (Ka = 0.0437, Ks = 0.9521)

Grin1 ENSRNOG00000011726 (Rat)

Gene Details

glutamate receptor, ionotropic, N-methyl D-aspartate 1 (Grin1), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029227, Rat)

Protein Percentage 94.15%
CDS Percentage 86.38%
Ka/Ks Ratio 0.04333 (Ka = 0.0419, Ks = 0.9659)

Genome Location

Sequence Coding sequence

Length: 2904 bp    Location: 800502..780208   Strand: -
Raw sequence   
>XM_004848779.1
ATGAGCACCATGCGCCTGCTGACCCTCGCCCTGCTCTTCTCCTGCTCCTTCGCCCGCGCCGCCTGCGACCCCAAGATCGTCAACATCGGCGCGGTGCTGAGCACGCGCAAGCACGAACAGATGTTCCGTGAGGCCGTGAACCAGGCCAACAAGCGACACGGCTCCTGGAAGATCCAGCTCAACGCCACCTCTGTCACCCACAAGCCCAATGCCATCCAGATGGCCCTGTCGGTGTGCGAGGACCTCATCTCTAGCCAGGTCTACGCCATCCTAGTTAGCCACCCACCTACCCCCAACGACCACTTCACACCCACCCCGGTCTCCTACACAGCTGGCTTCTACCGCATTCCCGTCTTGGGGCTGACCACCCGCATGTCCATCTACTCCGACAAGAGCATCCACCTGAGCTTCCTGCGCACCGTGCCGCCCTACTCGCATCAGGCGAGCGTCTGGTTCGAGATGATGCGCGTGTACAGCTGGAACCACATCATCCTGCTGGTCAGCGACGACCACGAGGGCCGGGCGGCGCAGAAGCGCCTGGAGACGCTGCTGGAGGAGCGCGAGTCCAAGAGTAAAAAAAGGAACTATGAAAACCTCGACCAACTGTCCTATGACAACAAGCGCGGACCCAAGGCCGAGAAGGTGCTACAGTTCGACCCGGGGACCAAGAACGTGACGGCCCTGCTGATGGAGGCACGGGAGCTGGAGGCCCGGGTCATCATCCTCTCTGCCAGCGAGGACGATGCCGCCACCGTGTACCGCGCGGCGGCGATGCTGAACATGACGGGCTCGGGGTACGTGTGGCTGGTGGGCGAGCGCGAGATCTCGGGGAACGCGCTGCGCTACGCACCCGACGGCATCATTGGGCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGTGGGTGTGGTGGCGCAGGCTGTGCACGAGCTGCTGGAGAAGGAGAACATCACCGACCCGCCCCGCGGCTGCGTGGGCAACACCAACATCTGGAAGACCGGGCCGCTGTTCAAGAGGGTGCTGATGTCTTCCAAGTATTCGGATGGAGTGACCGGCCGAGTGGAGTTCAATGAGGATGGAGACCGGAAGTTTGCCAACTACAGCATCATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGGCATCTATAATGGCAGCCACGTCATCCCGAACGACAGGAAGATCATCTGGCCAGGGGGGGAGACAGAGAAGCCTCGAGGGTACCAGATGTCCACGAGACTAAAGATCGTGACGATCCACCAGGAGCCCTTCGTGTATGTCAAGCCCACGCTGAGCGACGGCACGTGCAAGGAGGAGGTCACTGTCAACGGTGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAATGACACGTCGCCAGGCAGCCCACGCCACACGGTGCCTCAGTGCTGCTACGGCTTCTGCATTGACCTGCTCATCAAGCTGGCGCGGACCATGAACTTCACCTACGAGGTGCACCTGGTTGCGGATGGCAAGTTCGGCACACAGGAGCGGGTGAACAACAGTAACAAGAAGGAGTGGAACGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCGGACATGATCGTGGCCCCGCTGACCATCAACAACGAGCGCGCGCAGTACATTGAGTTCTCCAAACCCTTCAAGTACCAGGGCTTGACCATTCTGGTCAAGAAGGAGATCCCGAGGAGCACACTGGACTCATTCATGCAGCCGTTTCAGAGCACACTGTGGTTGCTGGTGGGGCTGTCGGTGCATGTGGTGGCTGTGATGCTGTACCTGCTGGACCGCTTCAGCCCCTTTGGCCGGTTCAAAGTGAACAGTGAGGAAGAGGAGGAGGATGCCCTGACCCTGTCCTCCGCCATGTGGTTCTCCTGGGGTGTCCTGCTCAACTCCGGCATCGGGGAAGGTGCCCCCCGGAGCTTCTCTGCACGCATCCTGGGCATGGTATGGGCTGGCTTTGCCATGATCATTGTGGCCTCCTACACTGCCAACCTGGCGGCCTTCCTGGTGCTGGATCGGCCTGAGGAGCGAATCACAGGCATCAATGACCCACGGCTGAGGAACCCCTCAGACAAGTTCATCTACGCGACAGTGAAACAGAGCTCGGTGGACATCTACTTCCGGCGGCAGGTGGAGCTGAGCACTATGTACCGGCACATGGAGAAGCACAACTATGAGAGCGCAGCCGAGGCCATCCAGGCCGTGCGGGACAACAAACTCCATGCCTTCATCTGGGACTCAGCCGTGCTGGAGTTCGAGGCTTCGCAGAAGTGTGACCTGGTGACCACGGGTGAGCTCTTCTTCCGCTCTGGCTTTGGGATCGGCATGCGCAAGGACAGCCCCTGGAAGCAGAATGTCTCCCTGTCCATCCTCAAGTCGCATGAGAACGGCTTCATGGAAGACCTGGACAAGACATGGGTTCGGTACCAGGAATGTGACTCACGCAGCAACGCCCCTGCAACCCTCACTTTCGAGAACATGGCAGGTGGGGCTCCCATCCCCCTCAGGCCCGTGCTGGCGCTGCTGAGGCTTCTCGGCCACAGCTGCAGCTCCGCCCTGCACACAGGGGTCTTCATGCTGGTGGCCGGGGGCATCGTGGCCGGCATCTTCCTGATTTTCATCGAGATTGCCTACAAGCGCCACAAGGATGCGCGCCGAAAGCAGATGCAGTTGGCCTTCGCGGCAGTGAACGTGTGGAGGAAGAACCTGCAGGTCCTTTGGGGACCTGGCCACTGCTCCCACTGGAGGGCACAAGGCCACGCTGACCATCAGACTCCAAGGCCAGTGTCCAGGAGCTGCCTCTATTGCTCCAGTTCCATCTTGACACCCGCCTCGGGCCCCTCGGCCTCCTCCTCAATCTTGATGTGTGCCCCTCGAGGATAG

Related Sequences

XP_004848836.1 Protein

Grin1 PREDICTED: glutamate receptor ionotropic, NMDA 1 isoform X9 [Heterocephalus glaber]

Length: 967 aa      View alignments
>XP_004848836.1
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQASVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSDGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGSHVIPNDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEVTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGGAPIPLRPVLALLRLLGHSCSSALHTGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQVLWGPGHCSHWRAQGHADHQTPRPVSRSCLYCSSSILTPASGPSASSSILMCAPRG