Sequence details NCBI ID: XM_004848650.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol C1qtnf3
Gene Name C1q and tumor necrosis factor related protein 3, transcript variant X1
Entrez Gene ID 101719490

Database interlinks

Part of NW_004624759.1 (Scaffold)

For more information consult the page for NW_004624759.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000022160 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017877, Guinea pig)

Protein Percentage 92.31%
CDS Percentage 90.55%
Ka/Ks Ratio 0.18123 (Ka = 0.0526, Ks = 0.2905)

C1qtnf3 ENSMUSG00000058914 (Mouse)

Gene Details

C1q and tumor necrosis factor related protein 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000106152, Mouse)

Protein Percentage 94.36%
CDS Percentage 90.91%
Ka/Ks Ratio 0.08803 (Ka = 0.0286, Ks = 0.3254)

C1qtnf3 ENSRNOG00000018570 (Rat)

Gene Details

C1q and tumor necrosis factor related protein 3 (C1qtnf3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025170, Rat)

Protein Percentage 94.67%
CDS Percentage 91.01%
Ka/Ks Ratio 0.07776 (Ka = 0.0256, Ks = 0.3292)

Genome Location

Sequence Coding sequence

Length: 960 bp    Location: 20456098..20480670   Strand: +
Raw sequence   
>XM_004848650.1
ATGCTTGGGAGGCAGATCATCTGTTGGCACCTGTTGGCTTTGTTTTTTCTCCCCTTTTGCCTGTGTCAAGATGAATACATGGAGGTGAGCGGAAGAGCTAATAAAGTGGTGGCGAGAATAGTGCAGAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGGAGGGAAAAAGTGAGAGAGCGGAGCCTTTCTAAAACGGGGACTGTGGATAATAACACTTCTACAGACCTAAAAACTCTGAGACCAGATGAGCTACCGCACCCAGAGGTGGATGATCTAGCCCAGATCACCCCGTTCTGGGGCCAGTCCCCACAAACTGGAGGACTGCCTCCAGATTGCAGCAAGTGTTGTCATGGAGACTACAGCTTCCGAGGCTATCAAGGACCCCCTGGACCTCCAGGCCCTCCAGGCATTCCAGGAAACCATGGAAACAATGGAAATAATGGAGCCACTGGCCATGAAGGGGCCAAAGGTGAGAAAGGAGACAAAGGTGACCTGGGTCCTCGAGGGGAGCGGGGGCAGCATGGCCCCAAAGGAGAGAAGGGCTACCCAGGGATTCCACCAGAACTGCAGATTGCATTTATGGCTTCTCTGGCAACTCATTTCAGCAATCAGAACAGCGGGATTATTTTCAGCAGTGTTGAGACCAACATTGGAAACTTTTTTGATGTCATGACTGGCAGATTTGGGGCCCCTGTATCAGGTGTGTATTTCTTCACCTTCAGCATGATGAAGCATGAAGATGTGGAGGAAGTACATGTGTACCTTATGCACAATGGAAATACAGTTTTCAGCATGTACAGCTATGAAACAAAGGGAAAATCAGATACATCCAGCAACCATGCAGTGCTGAAGCTTGCCAAAGGGGATGAAGTTTGGCTAAGAATGGGCAATGGTGCTCTTCACGGGGACCACCAGCGCTTCTCTACTTTTGCAGGCTTCCTGCTCTTTGAAACTAAGTAA

Related Sequences

XP_004848707.1 Protein

C1qtnf3 PREDICTED: complement C1q tumor necrosis factor-related protein 3 isoform X1 [Heterocephalus glaber]

Length: 319 aa      
>XP_004848707.1
MLGRQIICWHLLALFFLPFCLCQDEYMEVSGRANKVVARIVQSHQQTGRSGSRREKVRERSLSKTGTVDNNTSTDLKTLRPDELPHPEVDDLAQITPFWGQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVHVYLMHNGNTVFSMYSYETKGKSDTSSNHAVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGFLLFETK