Details from NCBI annotation

Gene Symbol Snx18
Gene Name sorting nexin 18
Entrez Gene ID 101698223

Database interlinks

Part of NW_004624759.1 (Scaffold)

For more information consult the page for NW_004624759.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNX18 ENSCPOG00000004242 (Guinea pig)

Gene Details

sorting nexin 18

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018276, Guinea pig)

Protein Percentage 97.64%
CDS Percentage 93.28%
Ka/Ks Ratio 0.03865 (Ka = 0.014, Ks = 0.3614)

SNX18 ENSG00000178996 (Human)

Gene Details

sorting nexin 18

External Links

Gene Match (Ensembl Protein ID: ENSP00000317332, Human)

Protein Percentage 85.15%
CDS Percentage 83.66%
Ka/Ks Ratio 0.08655 (Ka = 0.0983, Ks = 1.1354)

Snx18 ENSMUSG00000042364 (Mouse)

Gene Details

sorting nexin 18

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104864, Mouse)

Protein Percentage 96.05%
CDS Percentage 90.28%
Ka/Ks Ratio 0.02738 (Ka = 0.0187, Ks = 0.6827)

Snx18 ENSRNOG00000010971 (Rat)

Gene Details

sorting nexin 18 (Snx18), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063122, Rat)

Protein Percentage 96.2%
CDS Percentage 90.1%
Ka/Ks Ratio 0.02346 (Ka = 0.0161, Ks = 0.6864)

Genome Location

Sequence Coding sequence

Length: 1827 bp    Location: 4879363..4850555   Strand: -
>XM_004848524.1
ATGGCGCTGCGCGCCCGGGCGCTGTACGACTTCAGGTCGGAGAACCCGGGCGAGATCTCCCTGCGGGAGCACGAGGTGCTGAGTCTGTGCAGCGAGCAGGACATCGAGGGCTGGCTTGAAGGGGTCAACAGCCGCGGCGACCGCGGCCTCTTCCCGGCCTCGTACGTGCAGGTGATCCGCGCCCCCGAGCCCGGCCCCCCGGGCGACGGCGCCCCTGCCCGCTACGCTAACGTGCCGCCCGGGGGCTTCGAGCCGCTGCCCGCCGCGCCGCCCGCCTCCGCCTTCCAGCCGCCGCCGAGCACCTTCCAGCCGCCGGCCGCGGGCTTCCCATACGGCGGGGCCGCCCTGCAGCCGGCGCCCCAGCAACTCTACGGCGGCTACCAGGCCAGCCAGGGCAGCGACGACGACTGGGACGACGAGTGGGACGACAGCTCCACGGTGGCCGACGAGCCAGGCGCGCTGGGCAGCGGCGCGTACCCCGACCTCGAAGGCTCGGCGGCGGCGGCGGCGGGCGTCGCGGCGGGGCGCTACCGCCTCTCTACACGCTCCGACCTGTCGCTGGGCTCCAGAGGTGTCGCGGCGGCCCCGCAGCACCCCCCGTCGGGGGCCAAGAGCTCGGCCACCGTGAGCCGCAACCTCAACCGATTCTCCACCTTCGTCAAGTCTGGTGGGGAGGCCTTCGTTCTGGGTGAGGCGTCAGGCTTCGTGAAGGATGGGGACAAGCTGTGCGTGGTCCTGGGGCCCTATGGCCCCGAGTGGCAGGAGAACCCTTACCCGTTCCAGTGCACCATCGACGACCCCACCAAACAGACCAAGTTCAAGGGCATGAAGAGCTATATCTCCTACAAGCTGGTGCCCACGCACACCCAGGTGCCGGTGCACCGGCGCTACAAGCACTTCGACTGGCTGTACGCGCGCCTGGCTGAGAAGTTCCCGGTCATTTCGGTGCCCCATCTGCCCGAAAAGCAGGCCACAGGCCGCTTTGAGGAGGACTTCATCTCCAAGCGCAGGAAGGGCCTGATCTGGTGGATGAACCACATGGCCAGCCATCCGGTGCTGGCCCAGTGCGACGTTTTCCAGCATTTCTTGACGTGCCCCAGCAGCACTGATGAGAAGGCCTGGAAACAGGGCAAGAGGAAGGCTGAGAAGGATGAGATGGTGGGTGCCAACTTCTTCCTGACCCTGAGCACGCCCCCTGCTGCCGCCCTGGATTTGCAGGAGGTGGAGAGCAAGATCGACGGCTTCAAGTGCTTCACCAAGAAGATGGACGATAGCGCACTGCAACTCAACCACACGGCCAACGAGTTCGCGCGCAAGCAAGTGACAGGCTTTAAGAAGGAGTATCAGAAGGTGGGCCAGTCCTTCCGCGGCCTTAGCCAGGCCTTTGAGCTGGACCAGCAGGCCTTCTCCGTGGGCCTGAACCAGGCCATCGCCTTCACCGGAGATGCCTACGATGCCATTGGCGAGCTCTTCGCAGAGCAGCCCAGGCAGGACCTGGACCCCGTCATGGACCTGTTAGCGCTGTATCAGGGGCACCTGGCCAACTTCCCGGACATCATCCATGTTCAGAAAGGAGCTCTTACGAAAGTAAAGGAGAGTAGGCGACATGTGGAAGAAGGGAAGATGGAGGTCCAAAAGGCTGATGGCATTCAAGATCGCTGTAACACTATTTCTTTTGCCACTTTGGCTGAAATTCACCATTTCCATCAAATTCGAGTAAGAGACTTTAAATCACAGATGCAGCATTTCTTACAACAACAAATAATATTTTTCCAAAAAGTAACCCAGAAGTTGGAGGAAGCTCTTCACAAATATGATAGTGTTTAA

Related Sequences

XP_004848581.1 Protein

Snx18 PREDICTED: sorting nexin-18 [Heterocephalus glaber]

Length: 608 aa      View alignments
>XP_004848581.1
MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIRAPEPGPPGDGAPARYANVPPGGFEPLPAAPPASAFQPPPSTFQPPAAGFPYGGAALQPAPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLEGSAAAAAGVAAGRYRLSTRSDLSLGSRGVAAAPQHPPSGAKSSATVSRNLNRFSTFVKSGGEAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKLVPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQKGALTKVKESRRHVEEGKMEVQKADGIQDRCNTISFATLAEIHHFHQIRVRDFKSQMQHFLQQQIIFFQKVTQKLEEALHKYDSV