Details from NCBI annotation

Gene Symbol Fdft1
Gene Name farnesyl-diphosphate farnesyltransferase 1, transcript variant X2
Entrez Gene ID 101709374

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FDFT1 ENSCPOG00000007700 (Guinea pig)

Gene Details

farnesyl-diphosphate farnesyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006939, Guinea pig)

Protein Percentage 89.69%
CDS Percentage 86.81%
Ka/Ks Ratio 0.04786 (Ka = 0.0455, Ks = 0.9508)

FDFT1 ENSG00000079459 (Human)

Gene Details

farnesyl-diphosphate farnesyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000220584, Human)

Protein Percentage 91.13%
CDS Percentage 85.85%
Ka/Ks Ratio 0.05393 (Ka = 0.0431, Ks = 0.7995)

Fdft1 ENSMUSG00000021273 (Mouse)

Gene Details

farnesyl diphosphate farnesyl transferase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000055313, Mouse)

Protein Percentage 88.46%
CDS Percentage 84.94%
Ka/Ks Ratio 0.05869 (Ka = 0.0539, Ks = 0.9189)

Fdft1 ENSRNOG00000021314 (Rat)

Gene Details

farnesyl diphosphate farnesyl transferase 1 (Fdft1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029808, Rat)

Protein Percentage 86.54%
CDS Percentage 84.38%
Ka/Ks Ratio 0.07766 (Ka = 0.0654, Ks = 0.8415)

Genome Location

Sequence Coding sequence

Length: 1254 bp    Location: 25340159..25363669   Strand: +
>XM_004848461.1
ATGGAGTTCGTGAAGTGCCTGGGCCATCCCGAGGAGTTCTACAATCTGCTGCGCTTCCGGATCGGGGGCCGGTGGAAAGTGATGCCCAGGATGGACCAGGACTCGCTCAGCAGCAGCTTGAAAACTTGCTACAAGTATCTGAATCAGACCAGCCGCAGTTTTGCAGCGGTCATCCAGGCGCTGGACGGGGACATTCGCCATGCCGTGTGCGTGTTTTACCTGGTCCTCCGAGCTCTGGACACACTGGAAGATGACATGACCATCAGTGTGGAAAAGAAGGTCCCCCTGCTGCGTAGCTTCCACACCTTCCTTTATGAGCCGGACTGGCGGTACATGGAGAGCAAGGAGAAGCACCGACAAGTGCTGGAGGACTTCCCCACGATCTCCCTGGAATTCCGAAGTTTGGCTGAGAAATACCGAATTGTGATCGCTGACATTTGTCAGAAAATGGGAAGTGGGATGGCAGAGTTTCTGGATAAGCACGTGACCTCCAAGCAGGAGTGGGACAAGTACTGCCACTATGTCGCCGGGCTGGTGGGAATTGGCCTTTCTCGGCTGTTCTCGGCCTCGGAGTTTGAAGACCCCGTGGTTGGTGAAGACACCGAGCGGGCCAACTCCATGGGCCTGTTTCTGCAGAAAACGAACATCATCCGCGATTATCTGGAAGACCAGCAAGAAGGCAGAGAGTTCTGGCCTCAGGAGGTCTGGGGCAGGTACGTCAAGAAGCTGGGGGACTTTGCTCAGCCGGAGAACATGGACGTGGCCGTGCAGTGCCTCAACGAGCTGATAACCAACACGCTGCACCACATCCCCGACGTAATCACCTACCTGTCCCGGCTCCGGAACCAGAGCGTGTTCAACTTCTGTGCAATCCCACAGGTCATGGCCATTGCCACCTTGGCTGCCTGTTACAATAATCAACAGGTGTTCAAAGGGGTGGTGAAGATACGCAAGGGCCAGGCAGTGACCCTAATGATGGACGCCACCAACATGCCGGCTGTCAAAGCAATCATATCCCAGTATATGGAGGAGATTTACCACAGGATCCCCAGTTCAGACCCATCCTCCCATAAAACGAGGCAGATCATCTCCACGATCAGGACGCAGAATCTCCCCAACTGCCAGCTGCTCTCCCGGAGCCACTACTCCCCCATCTACCTATCCTTCATCATGATCTTGGCCGCCCTGAGCTGGCAGTACCTGAGTGCACTGTCCCAGGTCACAGAGGACTATGTGCAGACCGGGGAGCACTGA

Related Sequences

XP_004848518.1 Protein

Fdft1 PREDICTED: squalene synthase isoform X2 [Heterocephalus glaber]

Length: 417 aa      View alignments
>XP_004848518.1
MEFVKCLGHPEEFYNLLRFRIGGRWKVMPRMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIRHAVCVFYLVLRALDTLEDDMTISVEKKVPLLRSFHTFLYEPDWRYMESKEKHRQVLEDFPTISLEFRSLAEKYRIVIADICQKMGSGMAEFLDKHVTSKQEWDKYCHYVAGLVGIGLSRLFSASEFEDPVVGEDTERANSMGLFLQKTNIIRDYLEDQQEGREFWPQEVWGRYVKKLGDFAQPENMDVAVQCLNELITNTLHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIISQYMEEIYHRIPSSDPSSHKTRQIISTIRTQNLPNCQLLSRSHYSPIYLSFIMILAALSWQYLSALSQVTEDYVQTGEH