Sequence details NCBI ID: XM_004848442.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Prss55
Gene Name protease, serine, 55, transcript variant X2
Entrez Gene ID 101702750

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRSS55 ENSCPOG00000012970 (Guinea pig)

Gene Details

protease, serine, 55

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011677, Guinea pig)

Protein Percentage 79.78%
CDS Percentage 87.36%
Ka/Ks Ratio 0.36369 (Ka = 0.1081, Ks = 0.2972)

PRSS55 ENSG00000184647 (Human)

Gene Details

protease, serine, 55

External Links

Gene Match (Ensembl Protein ID: ENSP00000333003, Human)

Protein Percentage 64.89%
CDS Percentage 76.18%
Ka/Ks Ratio 0.33827 (Ka = 0.2227, Ks = 0.6584)

Prss55 ENSMUSG00000034623 (Mouse)

Gene Details

protease, serine, 55

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000086752, Mouse)

Protein Percentage 60.19%
CDS Percentage 68.76%
Ka/Ks Ratio 0.2714 (Ka = 0.2969, Ks = 1.0941)

Prss55 ENSRNOG00000047258 (Rat)

Gene Details

Protein LOC683415

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067083, Rat)

Protein Percentage 59.75%
CDS Percentage 69.29%
Ka/Ks Ratio 0.27042 (Ka = 0.2918, Ks = 1.079)

Genome Location

Sequence Coding sequence

Length: 966 bp    Location: 24373667..24448596   Strand: +
Raw sequence   
>XM_004848442.1
ATGCTCCTGCTCCCACTTCTGCTGCTCATGCCCCACGCCAAGGCAGCAGATGTTGGATGTGGTGAAAGACCCATTTTCAATGACAGAACTCAATATTCCCGGATCGTCGGGGGGAGAGAGGCGGGGGAGGGTGAGTTCCCATGGCAGGTGAGCATTCAGGTCGCCAATGAGCACCTTTGTGGTGGCACCATCCTCAGCGCATGGTGGATCCTCACAGCTGCTCACTGCTTAACTTCCGAGGAAATATCCCCCAAAGAACTGCGTGTGGTGGTGGGGACCAACGACTTAACCAACCCACGCTTGGAAATTAAGCAGGTCACCAGCATCATCTGCCACAGGGGCTACGTGAGAGCCACCATGGACAACGATATCGGCTTGCTGCTGCTGGCCTCACCCATCAAGTTCAACGGCCTGAAAGTGCCCATCTGCCTGCCCCCGCAGCCCAGCCCCATCAGCTGGCTCGAGTGCTGGGTGGCAGGATGGGGACAGACCAGTTCAACTGAAAAAAACTCCATGAAAAGCGATCTGATGAAAGTGCCAATGGTCATCATGGACTGGAAGGAATGTTCCAAGCTGTTCTCAAAACTCACCAAAAACATGCTGTGTGCCGGGTACCAGAACAAGAACTACGACGCCTGCCAGGGCGACAGCGGGGGGCCCCTCGTCTGCACCACAGATGAGTCGAGCAGTAAGTGGTACCAGGTGGGCATTATCAGCTGGGGCAGGAGCTGTGGGCAGAAGAACACCCCAGGAATATACACCCTCTTGGCCAAATACAACCGCTGGATCAAGAACGTGACACAGCTGGAGGGAAGGCCCTATAGCGTTGAGGAAATGTGGGATTCTCCGGAACAACCACGACAAAACTCTGGGACCTCAGCAAGCCCCGTGCCAGGCAGCCGAACAGCCTGGCTCCTGGCCCGCCTTCTGCCCTGCCTGTTGCTCAGAGCTCTTTTCAACTGGTAA

Related Sequences

XP_004848499.1 Protein

Prss55 PREDICTED: serine protease 55 isoform X2 [Heterocephalus glaber]

Length: 321 aa      View alignments
>XP_004848499.1
MLLLPLLLLMPHAKAADVGCGERPIFNDRTQYSRIVGGREAGEGEFPWQVSIQVANEHLCGGTILSAWWILTAAHCLTSEEISPKELRVVVGTNDLTNPRLEIKQVTSIICHRGYVRATMDNDIGLLLLASPIKFNGLKVPICLPPQPSPISWLECWVAGWGQTSSTEKNSMKSDLMKVPMVIMDWKECSKLFSKLTKNMLCAGYQNKNYDACQGDSGGPLVCTTDESSSKWYQVGIISWGRSCGQKNTPGIYTLLAKYNRWIKNVTQLEGRPYSVEEMWDSPEQPRQNSGTSASPVPGSRTAWLLARLLPCLLLRALFNW