Details from NCBI annotation

Gene Symbol Hmbox1
Gene Name homeobox containing 1, transcript variant X5
Entrez Gene ID 101699696

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HMBOX1 ENSCPOG00000011124 (Guinea pig)

Gene Details

homeobox containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010003, Guinea pig)

Protein Percentage 97.61%
CDS Percentage 96.74%
Ka/Ks Ratio 0.10653 (Ka = 0.0109, Ks = 0.1026)

HMBOX1 ENSG00000147421 (Human)

Gene Details

homeobox containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000380516, Human)

Protein Percentage 99.05%
CDS Percentage 94.91%
Ka/Ks Ratio 0.01924 (Ka = 0.0043, Ks = 0.2228)

Hmbox1 ENSMUSG00000021972 (Mouse)

Gene Details

homeobox containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000066905, Mouse)

Protein Percentage 98.57%
CDS Percentage 92.28%
Ka/Ks Ratio 0.01945 (Ka = 0.0067, Ks = 0.3421)

Hmbox1 ENSRNOG00000013326 (Rat)

Gene Details

Protein Hmbox1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017962, Rat)

Protein Percentage 98.09%
CDS Percentage 91.89%
Ka/Ks Ratio 0.02459 (Ka = 0.0088, Ks = 0.3594)

Genome Location

Sequence Coding sequence

Length: 1260 bp    Location: 23472825..23649872   Strand: +
>XM_004848436.1
ATGCTCAGTTCCTTTCCAGTGGTTTTGCTGGAAACAATGTCTCACTATACAGATGAACCCAGATTTACTATAGAACAGATAGATCTACTTCAGCGCCTTCGGCGTACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTTTGGACCGTCTTGATCAAGAGCATAGTGACAAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGTTCATATGGGAATAGTACCCACAATGTTCCAGCATCTTCCTCCACAGCTACAGCTTCCACACAGACCCAGCATTCGGGAATGTCCCCATCACCGAGCAACAGTTATGATACTTCCCCTCAGCCTTGCACTACCAATCAAAATGGAAGGGAGAACAATGAGCGATTGTCCACATCCAATGGGAAGATGTCACCAACTCGCTACCACGCAAATAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCTGAAGAGGACCTAGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTTGCAGCAGGGATCAGACCTCAGTGAACAGAAGAAGAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACCCTGGGGCTACACTAAGTATGAGACCAGCTCCCATTCCAATAGAGGACCCTGAGTGGAGACAAACGCCTCCCCCTGTGTCTGCCACACCTGGGACCTTCCGACTACGGCGAGGAAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCTGTCATGGAAAGTTACTTCAATGAGAATCAGTACCCAGATGAAGCAAAGCGAGAAGAAATTGCAAATGCTTGCAATGCAGTTATACAGAAGCCAGGCAAAAAACTGTCTGATCTGGAACGAGTTACCTCCCTGAAAGTATATAATTGGTTTGCTAATAGACGGAAGGAGATCAAGAGGAGAGCCAATATCGCAGCAATCCTGGAGAGCCATGGGATAGACGTACAGAGTCCAGGCGGCCATTCCAACAGTGATGATGTCGATGGGAACGACTACTCGGAGCAGGATGACAGCATGAGCCATAGTGACCACCAAGACCCCATCTCGCTAGCTGTGGAGATGGCAGCAGTCAACCATACTATCTTGGCCTTGGCCCGACAAGGAACCAACGAAATCAAGACAGAGGCCCTGGATGATGACTGA

Related Sequences

XP_004848493.1 Protein

Hmbox1 PREDICTED: homeobox-containing protein 1 isoform X5 [Heterocephalus glaber]

Length: 419 aa      View alignments
>XP_004848493.1
MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHSDKFGRRSSYGGSSYGNSTHNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRENNERLSTSNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPIEDPEWRQTPPPVSATPGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAAILESHGIDVQSPGGHSNSDDVDGNDYSEQDDSMSHSDHQDPISLAVEMAAVNHTILALARQGTNEIKTEALDDD