Sequence details NCBI ID: XM_004848406.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nuggc
Gene Name nuclear GTPase, germinal center associated
Entrez Gene ID 101721947

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NUGGC ENSCPOG00000003741 (Guinea pig)

Gene Details

nuclear GTPase, germinal center associated

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003378, Guinea pig)

Protein Percentage 87.53%
CDS Percentage 89.0%
Ka/Ks Ratio 0.20287 (Ka = 0.0657, Ks = 0.3239)

NUGGC ENSG00000189233 (Human)

Gene Details

nuclear GTPase, germinal center associated

External Links

Gene Match (Ensembl Protein ID: ENSP00000408697, Human)

Protein Percentage 81.91%
CDS Percentage 83.96%
Ka/Ks Ratio 0.19319 (Ka = 0.1022, Ks = 0.5288)

Nuggc ENSMUSG00000061356 (Mouse)

Gene Details

nuclear GTPase, germinal center associated

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000078434, Mouse)

Protein Percentage 77.16%
CDS Percentage 80.89%
Ka/Ks Ratio 0.21751 (Ka = 0.1346, Ks = 0.6189)

Nuggc ENSRNOG00000018238 (Rat)

Gene Details

Protein RGD1562099

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000042169, Rat)

Protein Percentage 78.17%
CDS Percentage 79.88%
Ka/Ks Ratio 0.19471 (Ka = 0.1372, Ks = 0.7047)

Genome Location

Sequence Coding sequence

Length: 2412 bp    Location: 22838061..22777612   Strand: -
Raw sequence   
>XM_004848406.1
ATGGCAGAAGTAGAGGATTTGGGAGGTCCAGAGCATTCCCCAGTTGATGATGATGATCCTTTTGAAGAACCAATGAAGAAAAGACGACGATCGGATCGAGAGCAGCGCTTCCGAGCTTTTCCCTCGGTGGAACAAAGTGCTCTCAAGGAATATGAAAAATTGGAGTCCCGGACCAGAAGGGTTTTGAGCAACACTTACCAGAAACTAATTCAGTCTGTCTTCCTGGATGACAGCATTCCTAACGGGGTCAAGTATCTCATAAACAGACTTCTTGCCATGATTGAAAAGCCGTCATTGGACCCAATCTACATTGGATTATTTGGAAGCACTGGGGCTGGAAAGAGCTCCCTGATCAACGCCATCATCCAGCAGGCAATGTTTCTCCCGGTCTCTGGAGACAACATATGCACTTCATGTGTTGTGCTAGTGAGCTCGGGCTGCTGTGAGCAGTACAAGGCCAAAATCCACCTTCTCTCTGACCAGGAATGGAAGGAGGAGCTGAAGAACTTGACCAAACTCCTGCACAGGACGGAGGAGGCTGGTGGAGAAGATGTGGATGCGGATGTGTGGGTTGGGGATGAAGCTTTGGAGGAGGCCATCTGGAAGCTGCAAGTGGTCTATGGAACTGGGGCAGAAAGGAAGAAGTATGAGGACTTACTAAGGGCAAAGCCCAAGGGGAAGATTCCCACCTCGAGAATCATCACCCTCAAGGCAGAAGAGGCCGGAGAGCTGTCTGTCAAACTGGATCCCTACATCCGTACTCAGAAGAGAGATTGGGATGGAGCGTCGGCGGAGACACGAATCTGGCCTTTGATCAAACATGTAGAAGTGACTCTTCCCAGGTCTGCGTTGATTCCAGAAGGGGTGGTGCTGGTGGACATTCCAGGGACAGGCGACTTCAACAGCAAGAGAGATGAGATGTGGAAAAAGACCATTGATAAGTGCTCGGTGATCTGGGTGGTCAGCGACATAGAGAGGGTTTCTGGAGGAAGAGCCCATGAAGACCTTCTCAACGAGAGCATCAAAGCCTGCCAGCGCGGCTTCTACAGGGACATTGCCTTGGTGGTCACCAAGACTGACAAACTCAACCTGCTGGAGTATCTCAGGGAAAGAAAAGTGGTAAATCGAGCTATTCAAAATCAGCGAGAGGCAGTTTTGGAAAGGAACCAAACAATAAAACTTCAAAGGAGTAGAATTCTCAAGGAAAAGCTTAAGAGAAAACTGCCGGCTAACTCCAAGGTTCTGGAGGCCTCGGACCTGGTGTACACCGTCAGCGCCCACGAGTACTGGCAGCGGGCTCTCCTCACCGAGGAGGAAACCGAAATCCCAAAGTTAAGAGAGTACATCAGGAAAAGCCTGCTGGACAAGAAGAGGAAGATGGTGAGCAAGTATGTCACTGAAGCCTTCGGCCTGTTGCTCCTCATGGACAGTTTCAGCTCCATGGAGAACCTGGCGAATGAACACTTGTACTCGAGCGGCCTGCGGAGATTTGTGGAGGAGAAGGTGGAGCTGCTGGAGGGGGCCATCGAGCAGTGCTTTGCGCACTTGGAACGGCCTCTGCAGGAAGGGGTCCTGGCGGCCAGGGTTTCCTACCGACGCCTCCTTGGGGCGCGCCTTGTGAGAAGTAGAGGAAACCAAGGTTTTCACCAGACTCTGAAAGCTGTTTGCTTGAAAAATGGCATCTATGCCTCCAGGACTCTGGCCAGAATCGACCTGAATGAAGCCATCACCCAGCCCATCTACGACCAGATTGACCCTGTTTTTGGAGCCATTTTTAGGGTGGGGAACCCCCTGGGGTTGGCCTTGATGCCTCACATCGAAGCTTTCAAGCACTCCCTGGAGGAGAAAATGACAGAAATCGGGATGAGAAACGGCTGGAACTATGATGGCTACAAGAAATCTTTCATGATCCAGGAGATAAGCGCCATCCTAGGAGACTTGGAAGGCTATATCATCAGGAAGAAGAGGAAGATCTATGAATCTGTCACCAGTTCTGTACAGAATGACCTGAAGCCCTGCTATGAAGAGGCAGCTCAGATCACTGGCAAGAAAGCATGCGAGAGGATGAAGGGCGCCATCAGAAGAGGGGTGGAGCGGCAGGTGGCTGAGGGCATGTTTGAAAGGGCTCAGGAAAGGATGCAGCACTGGTTTCAGCTGCTGAAGAATGGGATCACGGAGAAGGTGAAGGGCAGTATCAGCACCATGTTAGCCCTTGTGTCATCCCAGGGAGATGGTCTCTACAAAGAGCTTGCAGATGTCAGGAGCGAATACAAGGAGATGGAAAAGCTCCACCGAAGCCTGAGGGAGGTTGCTGAGGATGCTCTGCTGCGGAGGGGCATGCAAGATTTCCTCCTGAGGATGTCCCCCAGCAAAGTGGCCCCCCAAACCAGAATGTCAACACTTGAGGCTTAG

Related Sequences

XP_004848463.1 Protein

Nuggc PREDICTED: nuclear GTPase SLIP-GC [Heterocephalus glaber]

Length: 803 aa      View alignments
>XP_004848463.1
MAEVEDLGGPEHSPVDDDDPFEEPMKKRRRSDREQRFRAFPSVEQSALKEYEKLESRTRRVLSNTYQKLIQSVFLDDSIPNGVKYLINRLLAMIEKPSLDPIYIGLFGSTGAGKSSLINAIIQQAMFLPVSGDNICTSCVVLVSSGCCEQYKAKIHLLSDQEWKEELKNLTKLLHRTEEAGGEDVDADVWVGDEALEEAIWKLQVVYGTGAERKKYEDLLRAKPKGKIPTSRIITLKAEEAGELSVKLDPYIRTQKRDWDGASAETRIWPLIKHVEVTLPRSALIPEGVVLVDIPGTGDFNSKRDEMWKKTIDKCSVIWVVSDIERVSGGRAHEDLLNESIKACQRGFYRDIALVVTKTDKLNLLEYLRERKVVNRAIQNQREAVLERNQTIKLQRSRILKEKLKRKLPANSKVLEASDLVYTVSAHEYWQRALLTEEETEIPKLREYIRKSLLDKKRKMVSKYVTEAFGLLLLMDSFSSMENLANEHLYSSGLRRFVEEKVELLEGAIEQCFAHLERPLQEGVLAARVSYRRLLGARLVRSRGNQGFHQTLKAVCLKNGIYASRTLARIDLNEAITQPIYDQIDPVFGAIFRVGNPLGLALMPHIEAFKHSLEEKMTEIGMRNGWNYDGYKKSFMIQEISAILGDLEGYIIRKKRKIYESVTSSVQNDLKPCYEEAAQITGKKACERMKGAIRRGVERQVAEGMFERAQERMQHWFQLLKNGITEKVKGSISTMLALVSSQGDGLYKELADVRSEYKEMEKLHRSLREVAEDALLRRGMQDFLLRMSPSKVAPQTRMSTLEA