Sequence details NCBI ID: XM_004848398.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc25
Gene Name coiled-coil domain containing 25, transcript variant X2
Entrez Gene ID 101719235

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC25 ENSCPOG00000014356 (Guinea pig)

Gene Details

coiled-coil domain containing 25

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012932, Guinea pig)

Protein Percentage 85.1%
CDS Percentage 84.13%
Ka/Ks Ratio 0.22585 (Ka = 0.1142, Ks = 0.5056)

CCDC25 ENSG00000147419 (Human)

Gene Details

coiled-coil domain containing 25

External Links

Gene Match (Ensembl Protein ID: ENSP00000348933, Human)

Protein Percentage 93.75%
CDS Percentage 93.59%
Ka/Ks Ratio 0.14131 (Ka = 0.0289, Ks = 0.2045)

Ccdc25 ENSMUSG00000022035 (Mouse)

Gene Details

coiled-coil domain containing 25

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022614, Mouse)

Protein Percentage 95.19%
CDS Percentage 91.19%
Ka/Ks Ratio 0.05144 (Ka = 0.0219, Ks = 0.4251)

Ccdc25 ENSRNOG00000015939 (Rat)

Gene Details

coiled-coil domain containing 25 (Ccdc25), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021621, Rat)

Protein Percentage 94.71%
CDS Percentage 91.19%
Ka/Ks Ratio 0.06419 (Ka = 0.0248, Ks = 0.3871)

Genome Location

Sequence Coding sequence

Length: 672 bp    Location: 22575917..22540693   Strand: -
Raw sequence   
>XM_004848398.1
ATGGTGTTCTACTTCACCAGCAGCAGCGTTAATTCATCTACTTACACCATTTACATGGGAAAGGATAAATACGAAAATGAAGATCTGATAAAGTACGGCTGGCCTGAAGATATTTGCCTTCATGGAGAGAGGTGTGCGGACTACACACAAACCCGAAGCTGGTTTCATGTGGACAAAATCTCTTCAGCTCATGTATACCTTCGATTGCATAAGGGAGAGAAGATAGAAGACATTCCCAAGGAAGTGCTGGTGGACTGTGCCCAGCTTGTGAAGGCCAATAGCATTCAAGGCTGCAAGATGAACAACATTAATGTGGTGTACACACCATGGTCGAACCTGAAGAAGACAGCTGACATGGACGTGGGGCAGATAGGCTTTCACAGGCAGAAGGATGTAAAAATTGTAACAGTGGAGAAGAAAGTGAATGAAATCCTGAACCGATTAGAAAAGACCAAACTGGAACGGTTCCCAGACCTAGCAGCAGAGAAAGAAGGCAGAGATCGAGAAGAGAGGAATGAGAAAAAAGCCCAAATTCAGGAAATGAAAAGGAGAGAAAAAGAAGAAATGAAGAAGAAGAAGGAAATGGATGAGCTTAGGAGCTATTCATCATTAATGAAAGCTGAGAATATGTCTTCAAATCAGGATGACAATGATTCAGATGAATTCATGTGA

Related Sequences

XP_004848455.1 Protein

Ccdc25 PREDICTED: coiled-coil domain-containing protein 25 isoform X2 [Heterocephalus glaber]

Length: 223 aa      View alignments
>XP_004848455.1
MVFYFTSSSVNSSTYTIYMGKDKYENEDLIKYGWPEDICLHGERCADYTQTRSWFHVDKISSAHVYLRLHKGEKIEDIPKEVLVDCAQLVKANSIQGCKMNNINVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKLERFPDLAAEKEGRDREERNEKKAQIQEMKRREKEEMKKKKEMDELRSYSSLMKAENMSSNQDDNDSDEFM