Sequence details NCBI ID: XM_004848356.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nefm
Gene Name neurofilament, medium polypeptide
Entrez Gene ID 101703965

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NEFM ENSCPOG00000027410 (Guinea pig)

Gene Details

neurofilament, medium polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020650, Guinea pig)

Protein Percentage 94.23%
CDS Percentage 91.77%
Ka/Ks Ratio 0.07871 (Ka = 0.0308, Ks = 0.3917)

NEFM ENSG00000104722 (Human)

Gene Details

neurofilament, medium polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSP00000221166, Human)

Protein Percentage 90.4%
CDS Percentage 88.94%
Ka/Ks Ratio 0.11654 (Ka = 0.0533, Ks = 0.4573)

Nefm ENSMUSG00000022054 (Mouse)

Gene Details

neurofilament, medium polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022638, Mouse)

Protein Percentage 89.84%
CDS Percentage 87.34%
Ka/Ks Ratio 0.07615 (Ka = 0.0528, Ks = 0.693)

Nefm ENSRNOG00000013916 (Rat)

Gene Details

neurofilament, medium polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065853, Rat)

Protein Percentage 86.09%
CDS Percentage 84.29%
Ka/Ks Ratio 0.10645 (Ka = 0.0876, Ks = 0.8232)

Genome Location

Sequence Coding sequence

Length: 2565 bp    Location: 20030918..20036119   Strand: +
Raw sequence   
>XM_004848356.1
ATGAGCTACGCGCTGGACCCGCTGGGCAACCCGGCCGCCTACCGGCGGATCGCCGAAACCCGCTCGGGCTTCAGCCGGGTCAGCGGCTCCCCGTCCAGCGGCTTCCGCTCGCAGTCCTGGTCCCGCGGCTCGCCCAGCACCGCGTCCTCCTCCTACAAGCGCAGCAGCGCGCTCGCCCCGCGCCTCGCCTACAGCTCGGCCGAGAGCAGCCTCGACTTCAGCCAGTCTTCGTCCCTCCTCAACGGCGGTTCCGGCGGCGGCGACTACAAGCTGTCGCGCTCCAACGAGAAGGAGCAGCTGCAGGGGCTGAACGACCGCTTCGCTGGCTACATCGAGAAAGTGCACTTCTTGGAGCAGCAGAACAAGGAGATCGAGGCGGAGATCCAAGCGCTGAGGCAGAAGCAGGCCTCGCACGCCCAGCTGGGCGACGCGTACGACCAGGAGATCCGAGAGCTGCGCGCCACCCTGGAGCTGGTGAACCACGAGAAGGCGCAGGTGCAGCTGGACTCCGACCACCTGGAGGAAGACATCCACCGGCTCAAGGAGCGCTTTGAGGAGGAGGCCCGGCTGCGCGACGACACCGAGGTGGCCATCCGCGCGCTGCGCAAAGACATCGAGGAGTCGTCGCTGGTCAAGGTGGAGCTGGACAAGAAGGTGCAGTCGCTGCAGGATGAGGTGGCCTTCCTGCGCAGCAACCACGAGGAGGAGGTGGCGGACCTGCTGGCGCAGATCCAGGCGTCGCACATCACGGTGGAGCGCAGAGACTACCTGAAGACCGACATCTCCACGGCGCTGAAGGAGATCCGCTCGCAGCTCGAGTGCCACTCCGACCAGAACATGCACCAGGCCGAAGAGTGGTTCAAATGCCGCTACGCCAAGCTCACCGAGGCCGCGGAGCAGAACAAGGAGGCCATCCGCTCCGCCAAGGAGGAGATCGCCGAGTACCGGCGCCAGCTGCAGTCCAAGAGCATCGAGCTCGAGTCGGTGCGCGGCACCAAGGAGTCCCTGGAACGGCAGCTCAGCGACATCGAGGAGCGCCACAACCACGACCTCAGCAGCTACCAGGACACCATCCAGCAGCTGGAAAACGAGCTTCGGGGAACCAAGTGGGAAATGGCTCGTCATTTGCGAGAGTACCAAGATCTCCTCAACGTCAAGATGGCCCTGGACATCGAGATCGCTGCCTACAGGAAACTCCTGGAGGGTGAAGAGACAAGGTTTAGCACATTTTCAGGAAGCATCACTGGCCCGATATATACACACCGACAGCCCTCAGTCACCATATCCAGCAAGACTCAGAAAACCAAGGTGGAGGCCCCCAAGTTAAAGGTCCAACACAAGTTTGTCGAGGAAATCATAGAAGAAACCAAAGTGGAGGATGAGAAGTCAGAAATGGAAGATGCTCTGACGGCCATTGCAGAGGAGTTGGCCGTTTCCTCAAAAGAAGAGGCAGAAGAAAAGGAAGAGGAACAAAAAGCTGAGGAAGAAGTGGTGGCTGCCAAGAAGTCCCCAGTGAAAGCTGCTGCCCTTGAAGTGAAAGAGGAGGAAGAAGAGGAAAAGGAGGAAGAAGAAGGCCAGGAGGAAGAAGAGGAGGAAGATGAGGGTGCTAAGTCAGACCAAGCTGAAGAGGGCGGATCCGAGAAGGAAGGCTCAAGTGAAAAAGATGAAGCCGAGCAGGAAGAAGAAGGAGAAGCAGAGGCAGAAGGGGAAGAAGAAGCCAAAGCGAAAAAGGAGAAGAAAGTTGGCGAGAAGCGTGAGGAGGTGGCGGCCAAGGAGGAGCTGGTGACAGAAGCCAAGGTGGGAAAGCCAGAGAAAGCCAAGTCGCCTGTGCCAAAGTCCCCCGTGGAAGAGGTGAAGCTGAAAGCAGAAGCTGTGGCAGGGAAAAGTGAGCAGAAAGAGAAGGAGAAGGTGGAGGAAGAAAAGAAAGAAGTCACCAAGGAAGCTCCCAAAGAAGAGAAGGTGGAGAAAAAGGAGGAGAAGCCAAAAGATGTGCCAGAGAAGAAAGCCGAGTCCCCAGTGAAGGAGAAAGCCGTGAAGGAGGTGGTCCCCAAACCAGTAAAGGTGGGCGCCGAGAAGGAAGCCAAGGAGGAGGAGAAACCTCAGCAGTGGGAGGAGAAGGAGAAAGAGAAAGAGAAGGCAGAAGAGGAGGGAGGGAGTGAAGAAGGGAGTGATCAAGGCTCAAAGGAATCCAGGAAGGAAGACATAGCTGTCAATGGGGAGGTAGAAGGAAAAGAGGAGGAGGAGGAGGAAAAGCAAGAAACTAAGGAAAAGGGGAGTGGGAGAGAAGAGGAAAAAGGCGTGGTCACCAATGGTTTAGACGTGAGTCCAGCAGATGAAAAGAAAGGGGGTGACAGGAGCGATGAGAAAGTGGTGGTGACCAAAATGGTAGAAAAAATCACCAGTGAGGGGGGCGATGGTGCTACCAAATACATCACTAAATCTGTGACCGTCACCCAAAAGGTTGAAGAGCATGAAGAGACCTTTGAGGAGAAACTAGTGTCAACTAAAAAGGTAGAAAAAGTCACTTCACATGCTATCGTAAAGGAAGTCACTCAGAATGACTAA

Related Sequences

XP_004848413.1 Protein

Nefm PREDICTED: neurofilament medium polypeptide [Heterocephalus glaber]

Length: 854 aa      View alignments
>XP_004848413.1
MSYALDPLGNPAAYRRIAETRSGFSRVSGSPSSGFRSQSWSRGSPSTASSSYKRSSALAPRLAYSSAESSLDFSQSSSLLNGGSGGGDYKLSRSNEKEQLQGLNDRFAGYIEKVHFLEQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLELVNHEKAQVQLDSDHLEEDIHRLKERFEEEARLRDDTEVAIRALRKDIEESSLVKVELDKKVQSLQDEVAFLRSNHEEEVADLLAQIQASHITVERRDYLKTDISTALKEIRSQLECHSDQNMHQAEEWFKCRYAKLTEAAEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFSGSITGPIYTHRQPSVTISSKTQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEDALTAIAEELAVSSKEEAEEKEEEQKAEEEVVAAKKSPVKAAALEVKEEEEEEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKDEAEQEEEGEAEAEGEEEAKAKKEKKVGEKREEVAAKEELVTEAKVGKPEKAKSPVPKSPVEEVKLKAEAVAGKSEQKEKEKVEEEKKEVTKEAPKEEKVEKKEEKPKDVPEKKAESPVKEKAVKEVVPKPVKVGAEKEAKEEEKPQQWEEKEKEKEKAEEEGGSEEGSDQGSKESRKEDIAVNGEVEGKEEEEEEKQETKEKGSGREEEKGVVTNGLDVSPADEKKGGDRSDEKVVVTKMVEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKVEKVTSHAIVKEVTQND