Details from NCBI annotation

Gene Symbol Stc1
Gene Name stanniocalcin 1, transcript variant X1
Entrez Gene ID 101702749

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

STC1 ENSCPOG00000011818 (Guinea pig)

Gene Details

stanniocalcin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010631, Guinea pig)

Protein Percentage 87.45%
CDS Percentage 92.31%
Ka/Ks Ratio 0.39179 (Ka = 0.0625, Ks = 0.1596)

STC1 ENSG00000159167 (Human)

Gene Details

stanniocalcin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000290271, Human)

Protein Percentage 97.57%
CDS Percentage 94.2%
Ka/Ks Ratio 0.04425 (Ka = 0.011, Ks = 0.2478)

Stc1 ENSMUSG00000014813 (Mouse)

Gene Details

stanniocalcin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000014957, Mouse)

Protein Percentage 95.55%
CDS Percentage 90.28%
Ka/Ks Ratio 0.04246 (Ka = 0.0202, Ks = 0.4754)

Stc1 ENSRNOG00000015075 (Rat)

Gene Details

stanniocalcin 1 (Stc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020728, Rat)

Protein Percentage 95.14%
CDS Percentage 90.15%
Ka/Ks Ratio 0.05035 (Ka = 0.0226, Ks = 0.4491)

Genome Location

Sequence Coding sequence

Length: 744 bp    Location: 19047613..19036180   Strand: -
>XM_004848354.1
ATGCTCCAAAACTCAGCAGTGCTTCTGGTGCTGGTGATCAGTGCTTCTGCAACCCATGAGGCGGAGCAGAATGACTCTGTGAGCCCCAGGAAATCCCGAGTGGCAGCTCAGAACTCAGCTGAAGTGGTTCGCTGCCTCAACAGTGCTCTGCAGGTTGGCTGTGGGGCTTTTGCCTGCCTGGAAAACTCCACCTGTGACACAGATGGGATGTATGACATCTGTAAATCCTTCTTGTACAGCGCTGCTAAATTTGACACTCAGGGAAAAGCCTTTGTCAAAGAAAGCTTAAAGTGCATCGCCAACGGGGTCACCTCCAAGGTCTTTCTCACCATTCGGAGGTGCTCCACTTTCCAGAGGATGATTGCTGAGGTTCAGGAAGAGTGCTACAGCAAGCTGAATGTGTGCAGCATCGCCAAGCGGAACCCCGAGGCCATCACTGAGGTCGTGCAACTGCCCAATCACTACTCCAACAGATACTACAACAGACTCGTTCGAAGCCTTCTGGAATGTGATGAAGACACCGTCAGCACAATCAGAGACAGCCTGATGGAGAAAATTGGGCCCAACATGGCCAGCCTCTTCCACATCCTGCAGACAGACCATTGTGCCCAAACACACCCGAGAGCTGACTTCCACAGGAGGCGTACCAGTGAGCCGCAGAAGCTGAAGGTCCTCCTCAGGAACCTCCGAGGTGAGGGAGACTCTCCCTCCCATATCAAGCGTACCTCTCAGGAGAGTGCGTAA

Related Sequences

XP_004848411.1 Protein

Stc1 PREDICTED: stanniocalcin-1 isoform X1 [Heterocephalus glaber]

Length: 247 aa      View alignments
>XP_004848411.1
MLQNSAVLLVLVISASATHEAEQNDSVSPRKSRVAAQNSAEVVRCLNSALQVGCGAFACLENSTCDTDGMYDICKSFLYSAAKFDTQGKAFVKESLKCIANGVTSKVFLTIRRCSTFQRMIAEVQEECYSKLNVCSIAKRNPEAITEVVQLPNHYSNRYYNRLVRSLLECDEDTVSTIRDSLMEKIGPNMASLFHILQTDHCAQTHPRADFHRRRTSEPQKLKVLLRNLRGEGDSPSHIKRTSQESA