Sequence details NCBI ID: XM_004848353.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nkx2-6
Gene Name NK2 homeobox 6
Entrez Gene ID 101702407

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NKX2-6 ENSCPOG00000024932 (Guinea pig)

Gene Details

NK2 homeobox 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015216, Guinea pig)

Protein Percentage 63.8%
CDS Percentage 69.53%
Ka/Ks Ratio 0.21271 (Ka = 0.3132, Ks = 1.4723)

NKX2-6 ENSG00000180053 (Human)

Gene Details

NK2 homeobox 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000320089, Human)

Protein Percentage 74.58%
CDS Percentage 80.9%
Ka/Ks Ratio 0.22627 (Ka = 0.1474, Ks = 0.6514)

Nkx2-6 ENSMUSG00000044186 (Mouse)

Gene Details

NK2 transcription factor related, locus 6 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049898, Mouse)

Protein Percentage 60.0%
CDS Percentage 70.99%
Ka/Ks Ratio 0.21827 (Ka = 0.2643, Ks = 1.2108)

Nkx2-6 ENSRNOG00000021910 (Rat)

Gene Details

NK2 homeobox 6 (Nkx2-6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034838, Rat)

Protein Percentage 66.67%
CDS Percentage 71.99%
Ka/Ks Ratio 0.12346 (Ka = 0.213, Ks = 1.7255)

Genome Location

Sequence Coding sequence

Length: 891 bp    Location: 18914001..18911010   Strand: -
Raw sequence   
>XM_004848353.1
ATGCTGCTGAGCCGGGTCGCCTCCACCCCCTTCTCCGTCAGTGACATCCTGCGGCTGGAGCGCGAGCAGGCCGAGTTCTCACCACAATGGGGGTTGCGGAGGAGCCCGGAAAACCCTCGGTACCTGGGAGTGGGCCTGGAACCGCGAGGACCAGAGGTGTTTCACCACATCTGTAGTAGGGGCGGCAGAGGGCAGGAGCGCTCCGAGGCTCCTGGGAGTCCCTGCGAGGCAGTGGTACAGATGGACGCGGAACGGGTCGGGGGGCCACAGCCCGACCTGGGCGCGGTCTTGCCCCTCGGCGGTGGGAACAGCGGGGAGCCGGAGCGCAGCGTGGGCCACAGCGACGACCGCGTGCGCGGTGTCGGCCCCGAGCAGCCCAAGACGCGACCGCGGCGGAAGCCACGCGTGCTCTTCTCGCAGGCGCAGGTGCTGGCCCTGGAGCGGCGCTTCAAGCAGCAGCGGTACCTGTCGGCCCCGGAGCGCGAGCACCTGGCCAGCGCGCTGCAGCTCACGTCCACGCAGGTCAAGATCTGGTTCCAGAACAGGCGCTACAAGTGCAAGAGGCAGCGCCAGGACAAGTCGCTGGAACTAGCCGGCCGCCCGCTGGCGCCACGCCGGGTGGCAGTGCCTGTGCTGGTGCGCGACGGCAGGCCCTGCTTGGGACCGGGCGCGCCTGCCTTCCCCAGCCCCTATGCCGCGGCTGCGGCGCCCTATTCTTGCTACGGTGGGTTTGTGAGCTCCCCCTACGGAGCAGGATACAGTAGCGGCTACGCGGGGCCGGGACCAGCTACGCCCACGCCACTGGCCAGCTCCGGCTTCCGGCACAGCGGCCGGAGCGCCACCCCGCCAGGCCATCTGGCCGCCACGCTGCAGGGCGTCCGGGCCTGGTGA

Related Sequences

XP_004848410.1 Protein

Nkx2-6 PREDICTED: homeobox protein Nkx-2.6 [Heterocephalus glaber]

Length: 296 aa      View alignments
>XP_004848410.1
MLLSRVASTPFSVSDILRLEREQAEFSPQWGLRRSPENPRYLGVGLEPRGPEVFHHICSRGGRGQERSEAPGSPCEAVVQMDAERVGGPQPDLGAVLPLGGGNSGEPERSVGHSDDRVRGVGPEQPKTRPRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVKIWFQNRRYKCKRQRQDKSLELAGRPLAPRRVAVPVLVRDGRPCLGPGAPAFPSPYAAAAAPYSCYGGFVSSPYGAGYSSGYAGPGPATPTPLASSGFRHSGRSATPPGHLAATLQGVRAW