Sequence details NCBI ID: XM_004848346.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Loxl2
Gene Name lysyl oxidase-like 2, transcript variant X2
Entrez Gene ID 101700042

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LOXL2 ENSCPOG00000009701 (Guinea pig)

Gene Details

lysyl oxidase-like 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008707, Guinea pig)

Protein Percentage 95.51%
CDS Percentage 92.68%
Ka/Ks Ratio 0.04796 (Ka = 0.0197, Ks = 0.4112)

LOXL2 ENSG00000134013 (Human)

Gene Details

lysyl oxidase-like 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000373783, Human)

Protein Percentage 88.21%
CDS Percentage 88.56%
Ka/Ks Ratio 0.09205 (Ka = 0.0561, Ks = 0.6096)

Loxl2 ENSMUSG00000034205 (Mouse)

Gene Details

lysyl oxidase-like 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022660, Mouse)

Protein Percentage 88.65%
CDS Percentage 85.63%
Ka/Ks Ratio 0.06755 (Ka = 0.0587, Ks = 0.8691)

Loxl2 ENSRNOG00000016758 (Rat)

Gene Details

lysyl oxidase-like 2 (Loxl2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000055457, Rat)

Protein Percentage 89.41%
CDS Percentage 85.83%
Ka/Ks Ratio 0.06156 (Ka = 0.0541, Ks = 0.8786)

Genome Location

Sequence Coding sequence

Length: 2340 bp    Location: 18644270..18567367   Strand: -
Raw sequence   
>XM_004848346.1
ATGGAGAGGCCGCTCGGCTCTGGCCTCTGCGGCTGTTTGGCTGTGCTCATCCTGCTGCCATCCCTGAGCCTGGCACAGTATGACAGCTGGCCTTACCAGCTCCAGTACCCCGAGTACTTCCAGCAGCCGGCACCCGAGTACCACCGGCCTCAGGTGCCCTCAGACGTGGTCAAGATCCAGCTGCGCCTGGCGGGCCAGAAGAGGAAGCACAACGAGGGCCGCGTGGAGGTCTACTATAACGGCCAGTGGGGCACGGTGTGCGACGACGACTTCTCCATCCACGCCGCCCACGTCGTCTGCCGGGAGCTGGGATATGTGGAGGCCAAGTCCTGGACTGCCAGCTCGTCCTACGGCAAGGGGGAAGGGCCCATCTGGTTGGACAATGTCTACTGCACGGGCAGCGAGGCCACCCTGGCAGCCTGCTCCTCCAACGGCTGGGGAGTCACCGACTGCAAACACACAGAGGATGTTGGTGTGGTGTGCAGTGAGAAAAGGATTCCTGGGTTCAAATTTGACAACTCATTGATCAACCAGATAGAGAACCTGAATATCCAGGTGGAGGACATCCGGATCCGCGCCGTCCTCTCAGCTTTCCGCCATCGGACCCCGGTCACGGAGGGCTACGTGGAAGTGAAGGTGGGCAAGGCCTGGAAGCAGATCTGCGACAAGCACTGGACGGCTAAGAATGCCCACGTGGTCTGCGGCATGTTCGGTTTCCCTGGCGAGAAGACTTACAACACCAAGGCCTACAAAATGCTCGCCACACGGAGGAAGAAGCGTTACTGGCCATACTCCATGAACTGCACCGGCACAGAAGCCCACATCTCCAGCTGCAAGCTGGGTCCCCAAGTGTCACGGGAGCCTGTGAAGAATATCACCTGTGAGAATGGGCAGCCCGTAGTGGTCAGCTGTGTGCCTGGGCAGGTCTTCAGCCCTGATGGACCCTCGAGATTCCGGAAAGCCTACAAACCAGAGCAACCCCTGGTGCGGCTCAGAGGCGGTGCCCAGGTCGGGGAGGGCCGAGTGGAGGTGCTCAAGAACGGAGAGTGGGGGACAGTGTGCGACGACAACTGGGACCTGGTGTCGGCCAGCGTGGTCTGCAGAGAGCTGGGCTTCGGGACTGCCAAGGAGGCCGTCACTGGCTCCAGGCTGGGGCAAGGGATCGGACCCATCCACCTCAACGAGGTCCAGTGCACAGGGAACGAGAAGTCCATCATCGAGTGCAGACTCAACACCGAGTCACAGGGCTGCAACCATGAAGAAGATGCAGGGGTGCGGTGCAACATCCCCACCATGGGCTTCCAGAAGAAGGTGCGCCTGAACGGGGGCCGAAATCCCTACGAGGGCCGGGTGGAGGTGCTGACAGAGAGGAACGGGTCCCTGGTGTGGGGGACGGTGTGTGGCCAGAACTGGGGCATCGTGGAGGCCATGGTGGTCTGCCGGCAGCTGGGCCTGGGGTTCGCCAGCAACGCCTTCCAGGAGACCTGGTATTGGCATGGAAATGATGGCAACAAAGTGGTCATGAGTGGAGTGAAGTGCTCAGGAACGGAGCTGTCCCTGGCACACTGCCGCCACGAGGAGGACATATTCTGCCCCCAGGGTGCAGTGCAGTATGGGGCCGGAGTCGCCTGCTCAGAAACCGCCCCCGACCTGGTGCTCAACGCGGAGCTGGTACAGCAGACCACCTACCTGGAGGAGCGGCCCATGTCCATGCTGCTGTGTGCCCAGGAGGAGAACTGCCTCTCAGCCTCAGCCGCACTGGTGCAAACCAACGAGGAGCTGGCCCGCCACTACCGCCGCCTGCTGCGATTCTCCTCCCAGATCCACAACAATGGCCAGTCCGACTTCCGCCCCAAGAACGGCCGCCACGCATGGATCTGGCACGACTGTCACAGGCACTACCACAGCATGGAAGTGTTCACCCACTACGACCTGCTGAGCCTCAATGGCACCAAGGTGGCCGAGGGCCACAAGGCCAGCTTCTGCTTGGAGGACACAGAGTGCGAAGGAGACATCCAGAAAAGTTACGAGTGTGCCAACTTTGGGGAGCAGGGCATCACCATGGGCTGCTGGGACATATACCGCCACGACATTGACTGCCAGTGGATCGACATCACCGACGTGCCCCCTGGAGAATACCTGTTCCAGGTTGTCATTAACCCCAACTACGAGGTCCCAGAGTCAGATTTCTCCAACAACATCATGAAGTGCAGGTGTCGCTATGATGGCCACCGCATCTGGATGTACAACTGCCACATAGGTGGCTCCTTGAGTGAGGAGACAGAACAGAAGTTTGAGCAGTTCAGCGGACTCTTAAACAACCACCTCTCCACACAGTAA

Related Sequences

XP_004848403.1 Protein

Loxl2 PREDICTED: lysyl oxidase homolog 2 isoform X2 [Heterocephalus glaber]

Length: 779 aa      View alignments
>XP_004848403.1
MERPLGSGLCGCLAVLILLPSLSLAQYDSWPYQLQYPEYFQQPAPEYHRPQVPSDVVKIQLRLAGQKRKHNEGRVEVYYNGQWGTVCDDDFSIHAAHVVCRELGYVEAKSWTASSSYGKGEGPIWLDNVYCTGSEATLAACSSNGWGVTDCKHTEDVGVVCSEKRIPGFKFDNSLINQIENLNIQVEDIRIRAVLSAFRHRTPVTEGYVEVKVGKAWKQICDKHWTAKNAHVVCGMFGFPGEKTYNTKAYKMLATRRKKRYWPYSMNCTGTEAHISSCKLGPQVSREPVKNITCENGQPVVVSCVPGQVFSPDGPSRFRKAYKPEQPLVRLRGGAQVGEGRVEVLKNGEWGTVCDDNWDLVSASVVCRELGFGTAKEAVTGSRLGQGIGPIHLNEVQCTGNEKSIIECRLNTESQGCNHEEDAGVRCNIPTMGFQKKVRLNGGRNPYEGRVEVLTERNGSLVWGTVCGQNWGIVEAMVVCRQLGLGFASNAFQETWYWHGNDGNKVVMSGVKCSGTELSLAHCRHEEDIFCPQGAVQYGAGVACSETAPDLVLNAELVQQTTYLEERPMSMLLCAQEENCLSASAALVQTNEELARHYRRLLRFSSQIHNNGQSDFRPKNGRHAWIWHDCHRHYHSMEVFTHYDLLSLNGTKVAEGHKASFCLEDTECEGDIQKSYECANFGEQGITMGCWDIYRHDIDCQWIDITDVPPGEYLFQVVINPNYEVPESDFSNNIMKCRCRYDGHRIWMYNCHIGGSLSEETEQKFEQFSGLLNNHLSTQ