Details from NCBI annotation

Gene Symbol R3hcc1
Gene Name R3H domain and coiled-coil containing 1, transcript variant X1
Entrez Gene ID 101699205

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

R3HCC1 ENSCPOG00000009696 (Guinea pig)

Gene Details

R3H domain and coiled-coil containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008702, Guinea pig)

Protein Percentage 76.92%
CDS Percentage 83.0%
Ka/Ks Ratio 0.36716 (Ka = 0.145, Ks = 0.3951)

R3HCC1 ENSG00000104679 (Human)

Gene Details

R3H domain and coiled-coil containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000265806, Human)

Protein Percentage 70.97%
CDS Percentage 79.97%
Ka/Ks Ratio 0.27436 (Ka = 0.1766, Ks = 0.6437)

R3hcc1 ENSMUSG00000034194 (Mouse)

Gene Details

R3H domain and coiled-coil containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113898, Mouse)

Protein Percentage 52.16%
CDS Percentage 63.01%
Ka/Ks Ratio 0.24948 (Ka = 0.4423, Ks = 1.7729)

R3hcc1 ENSRNOG00000016777 (Rat)

Gene Details

Protein R3hcc1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022706, Rat)

Protein Percentage 70.0%
CDS Percentage 76.74%
Ka/Ks Ratio 0.31802 (Ka = 0.2028, Ks = 0.6377)

Genome Location

Sequence Coding sequence

Length: 1392 bp    Location: 18559659..18566342   Strand: +
>XM_004848342.1
ATGCGACGCCTGACCTTGCGCTGGGCCCGCGGCGCCTGGGAGGCGGCCCTGGCTCTCTCAGCAGTCACCCTGGCCCTGCTCTGTTTGGACGGTGTCTTCCTATCCTCGGCCGAGAATGACTTTGTCCACCGGGTCCAGGAGGAGCTGGACCGCTTCCTGCTGCAGAAGCAGCTGTCAAAGGTTCTGCTTTTCCCCCCACTGTCCAGTCGCCTGCGGTACCTGATCCATAGAACAGCGGAGAAGTTTGATCTCTTGAGCAGCTTCTCTGTTGGTGAAGGCTGGAAGAGGAGGACTGTCATCTGTCACCTGGACGTCAGGGTACTGAGTTCACACGGGCCCTGCCGCCCTCCTGCCGGCCACCCCGGCAAATACCATGGTCCTCGGCCCACCTCGAACCAGGGAGCGGGTGCCGGTCCCCAAGGTGCACGGGCTGGCTGGTGGCATCGTGGACGCAAGCCCGACCAGCCTTTGTATGTGCCCCGGGTGCTGCGCAGGCAAGATGACGGGGCAGTGACCTCCACCCCAGGGGTCAAGGGAGAGGCCCCCGCTGGTGGGGTCTTGGAAGAGTCCGGAGATGCAGGTGCTGGGGACCCCGACGCTGATCAAGGACTCCCCGTGTTGATAACTCAGGAAACGGCGGACCTGAAGGGCCCAGGCCAAAGTTTCGAGAATGAAACACGGCTGGAGCCAGCTGACACTGGGCCCCCAGGGCCTGAGAGTCCCTCAGGGAAGGCCTGTGGGGTGGAGCTAGCCAAACAGCTAGGGTCCAGTGTGCAGCCAGCCCTGAAGGAGGAGGATGCGAGTCAGCTGGAGCAGATTCTGAAGGACAAAGAGAAGGAGGACGAAGGAGAAGAGGGCAGCTGCTCCGAGGAGGAGCGCAGTGAGCTGCTGCAGGAGGTGAAGGAGACAGCGCACAGGCAGATCACAGCCAACCTGACGGAGAAGGAGATTCAGGTAGAGAAGGCCCAGCTCGACCTGTCCTGTTTCTCGGAGGAGCTGCCTGGGGAGAAGGACCTGGCCCATGTGTTGGAGATCTACGACTTCGAGCCGGCACTCAGGACGGAGGACCTGCTGGCCACGTTCTCTGAGTTCCAGGACAAAGGGCTCAAGATCCAGTGGGTAGACGACACGCACGCACTTGGCATCTTCCCCTGCCTGGCCTCAGCTACTGAGGCTCTGACCAAGGACTTCTCCATTCTCAAGATCCGGCCGCTCACAGAGGGAACCAAGCAGTCGAAGCTCAGAGCCCTACAGAGGCCAAAGCTCCTGCAACTGGTGAAGGAGAGGCCACAGACAGATGCGGCAGTGGCCCGGAGGCTGGTGGCCCGGGCTCTGGGGCTCCAACACAAAAAGAAAGAGCGGCCTTCCGGCCCAAGTAACCTGCCGTCCTAA

Related Sequences

XP_004848399.1 Protein

R3hcc1 PREDICTED: R3H and coiled-coil domain-containing protein 1 isoform X1 [Heterocephalus glaber]

Length: 463 aa      View alignments
>XP_004848399.1
MRRLTLRWARGAWEAALALSAVTLALLCLDGVFLSSAENDFVHRVQEELDRFLLQKQLSKVLLFPPLSSRLRYLIHRTAEKFDLLSSFSVGEGWKRRTVICHLDVRVLSSHGPCRPPAGHPGKYHGPRPTSNQGAGAGPQGARAGWWHRGRKPDQPLYVPRVLRRQDDGAVTSTPGVKGEAPAGGVLEESGDAGAGDPDADQGLPVLITQETADLKGPGQSFENETRLEPADTGPPGPESPSGKACGVELAKQLGSSVQPALKEEDASQLEQILKDKEKEDEGEEGSCSEEERSELLQEVKETAHRQITANLTEKEIQVEKAQLDLSCFSEELPGEKDLAHVLEIYDFEPALRTEDLLATFSEFQDKGLKIQWVDDTHALGIFPCLASATEALTKDFSILKIRPLTEGTKQSKLRALQRPKLLQLVKERPQTDAAVARRLVARALGLQHKKKERPSGPSNLPS