Details from NCBI annotation

Gene Symbol Lgi3
Gene Name leucine-rich repeat LGI family, member 3
Entrez Gene ID 101711898

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LGI3 ENSCPOG00000003300 (Guinea pig)

Gene Details

leucine-rich repeat LGI family, member 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002981, Guinea pig)

Protein Percentage 95.8%
CDS Percentage 92.46%
Ka/Ks Ratio 0.04969 (Ka = 0.0187, Ks = 0.3754)

LGI3 ENSG00000168481 (Human)

Gene Details

leucine-rich repeat LGI family, member 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000302297, Human)

Protein Percentage 95.62%
CDS Percentage 91.3%
Ka/Ks Ratio 0.03635 (Ka = 0.0188, Ks = 0.5174)

Lgi3 ENSMUSG00000033595 (Mouse)

Gene Details

leucine-rich repeat LGI family, member 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046705, Mouse)

Protein Percentage 95.26%
CDS Percentage 88.87%
Ka/Ks Ratio 0.03332 (Ka = 0.0215, Ks = 0.645)

Lgi3 ENSRNOG00000011323 (Rat)

Gene Details

leucine-rich repeat LGI family, member 3 (Lgi3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015104, Rat)

Protein Percentage 95.07%
CDS Percentage 88.81%
Ka/Ks Ratio 0.03895 (Ka = 0.0241, Ks = 0.6183)

Genome Location

Sequence Coding sequence

Length: 1653 bp    Location: 17737666..17728317   Strand: -
>XM_004848279.1
ATGGCCCTGGCGCGGCTGCGGGCCAGGTGGGGCCCTGGGCCCGGGCTGCTGGCGCTGTCCACGCTGGGTTTCTGCCTGATTCTGCAAGTCAGTGCCAAGAGGCCCCCCAAGGCGCCCCCCTGCCCGGCCAGCTGCTCCTGCACCAGGGACACCGCCTTCTGCGTGGACTCTAAGGCGGTGCCCAGGAACCTGCCCTCCGAGGTCATCTCTCTGACCCTGGTGAATGCTGCCTTCTCAGAGATCCAAGACGGCGCCTTCTCCCACCTGCCACTGCTGCAGTTCTTATTACTCAACTCCAACAAGTTCACGCTGATTGGAGACAACGCCTTCACAGGACTGTCCCACCTGCAGTACCTCTTCATTGAAAACAATGACATCTGGGCCCTATCCAAGTTCACCTTCAGGGGGCTCAAGTCCTTGACACACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGCCCCTGGACATTCTGAGTGACTTGGACCTACGGGGCAATGCGCTCAACTGCGACTGCAAGGTGAAGTGGCTGGTGGAGTGGCTGGCCCACACCAATGCCACTGTGGCCCCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAGCACAAGGTGCAGGACCTGCCGCTGCGGGAGTTTGACTGCATCACCACAGACTTCGTGCTCTACCAGACCCTGTCCTTCCCAGCCGTGTCCGCTGAGCCCTTCCTTTACTCCAGCGACCTCTACTTGGCTCTGGCCCAGCCCAGCGCCAGTGCCTGCGCAGTGCTGAAGTGGGACTATGTGGAAAGGCAGCTTCGAGACTACGATAGAATCCCAGCCTCCTCAGCCGTCCACTGCAAGCCGATGGTGGTGGACAGCCAGCTGTATGTGGTCGTGGCCCAACTGTTCGGTGGCTCTTACATTTACCACTGGGATCCCAACACCACGCGCTTCACCAAGCTGCAGGACATCGACCCCCAGCGCGTTCGCAAGCCCAACGACCTGGAGGCCTTCCGCATTGACGGCGACTGGTACTTTGCTGTGGCTGACAGCTCCAAGGCAGGTGCCACCAGCCTCTACCGTTGGCACCAAAATGGCTTTTACTCCCACCAGGCTCTGCACGCCTGGCACCGTGACACCGACCTCGAGTTTGTGGATGGCGAGGGCAAGCCGCGGCTGATTGTGTCTAGCAGCTCCCAGGCACCGGTCATCTATCAATGGAGTCGAACCCAGAAACAGTTTGTGCCCCAGGGAGAGGTGACTCAGGTACCTGATGCCCAGGCTGTGAAACACTTCCGTGCTGGCCGTGACAGCTACCTGTGCCTCAGCCGCTACATCGGTGACTCCAAGATCCTGCGCTGGGAGGCCACCCGCTTCTCCGAGGTACAGGCGCTGCCCTCCCGCGGCTCCCTGGCCCTGCAGCCCTTCCTGGTGGGTGGCCACCGCTACCTGGCGCTGGGCAGCGACTTCTCCTTCACGCAGATCTACCAGTGGGACGAGGGGCGAGAGAAGTTTGTACGGTTCCAGGAGCTGGCAGTGCAGGCCCCCCGGGCCTTCTGCTACATCCCTGCTGGGGACACCCAGCTGCTCCTGGCCCCCAGCTTCAAGGGACAGACGCTGGTATACCGACACATCGTGGTGGATCTCAGTGCCTAG

Related Sequences

XP_004848336.1 Protein

Lgi3 PREDICTED: leucine-rich repeat LGI family member 3 [Heterocephalus glaber]

Length: 550 aa      View alignments
>XP_004848336.1
MALARLRARWGPGPGLLALSTLGFCLILQVSAKRPPKAPPCPASCSCTRDTAFCVDSKAVPRNLPSEVISLTLVNAAFSEIQDGAFSHLPLLQFLLLNSNKFTLIGDNAFTGLSHLQYLFIENNDIWALSKFTFRGLKSLTHLSLANNNLQTLPRDIFRPLDILSDLDLRGNALNCDCKVKWLVEWLAHTNATVAPIYCASPPRFQEHKVQDLPLREFDCITTDFVLYQTLSFPAVSAEPFLYSSDLYLALAQPSASACAVLKWDYVERQLRDYDRIPASSAVHCKPMVVDSQLYVVVAQLFGGSYIYHWDPNTTRFTKLQDIDPQRVRKPNDLEAFRIDGDWYFAVADSSKAGATSLYRWHQNGFYSHQALHAWHRDTDLEFVDGEGKPRLIVSSSSQAPVIYQWSRTQKQFVPQGEVTQVPDAQAVKHFRAGRDSYLCLSRYIGDSKILRWEATRFSEVQALPSRGSLALQPFLVGGHRYLALGSDFSFTQIYQWDEGREKFVRFQELAVQAPRAFCYIPAGDTQLLLAPSFKGQTLVYRHIVVDLSA