Details from NCBI annotation

Gene Symbol Slc18a1
Gene Name solute carrier family 18 (vesicular monoamine), member 1, transcript variant X1
Entrez Gene ID 101703356

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC18A1 ENSCPOG00000001743 (Guinea pig)

Gene Details

solute carrier family 18 (vesicular monoamine transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001574, Guinea pig)

Protein Percentage 92.19%
CDS Percentage 92.13%
Ka/Ks Ratio 0.19779 (Ka = 0.0411, Ks = 0.2079)

SLC18A1 ENSG00000036565 (Human)

Gene Details

solute carrier family 18 (vesicular monoamine transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000387549, Human)

Protein Percentage 85.33%
CDS Percentage 87.11%
Ka/Ks Ratio 0.24532 (Ka = 0.084, Ks = 0.3423)

Slc18a1 ENSMUSG00000036330 (Mouse)

Gene Details

solute carrier family 18 (vesicular monoamine), member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046924, Mouse)

Protein Percentage 84.07%
CDS Percentage 84.2%
Ka/Ks Ratio 0.20201 (Ka = 0.097, Ks = 0.4802)

Slc18a1 ENSRNOG00000011992 (Rat)

Gene Details

solute carrier family 18 (vesicular monoamine transporter), member 1 (Slc18a1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016193, Rat)

Protein Percentage 85.22%
CDS Percentage 84.77%
Ka/Ks Ratio 0.1921 (Ka = 0.0903, Ks = 0.4699)

Genome Location

Sequence Coding sequence

Length: 1578 bp    Location: 15894529..15864204   Strand: -
>XM_004848255.1
ATGCTCTGGGGGGTCCTGGATGCTTCCCAGCAGTGGCTGAAGGAAGGGAGAGAGTCCCGGCAGCTGGTGCTGGTGGTGGTATTCGTAGCTTTGCTCCTGGACAACATGCTGCTTACTGTGGTGGTGCCCATTGTGCCCACCTTCCTCTATGCCACGGAGTTTGAAGAAAGCAACTCTTCTCTGCACACCGGTCATTCTCTAAGTTCCCTGCAAACTCCCACCCCTCTTGCCTTCTCTGGCATCTTCTCCTTTTTTGACAACATCACCATAGTTGTGGAAGAAAGTGTTCCCAGGAGCACAGCATGGCCCAGTGGCTCTTCTGGCACCATCCCCCCTCCAGTCGCTGTGGCCAGCTCAGCGCCTAAAAACAACTGCTTGCAAGGCACAGAGTTCTTGGAGGAAGAGAACATTCGGGTCGGAGTTCTGTTTGCTTCAAAGGCTTTGATGCAACTTCTGGTCAACCCATTCGTGGGACCTCTCACCAACAGGGTTGGATATCACATTCCTATGTTTGCTGGCTTTGTTATCATGTTCCTCTCCACCACTATGTTTGCTTTTTCTGGCACATATAGCCTGCTGTTTGTGGCCCGGGCCCTCCAAGGCATTGGATCTTCATTTTCCTCTGTTGCGGGTCTTGGAATGCTGGCCAGTGTCTACACCGATGACTACGAGAGAGGAAAAGTCATGGGAATCGCTTTGGGTGGCCTGGCTTTGGGAGTGCTGGTGGGAGCTCCCTTTGGAAGTGTGATGTATGAGTTTGTTGGAAAGTCTGCTCCCTTTCTCATCCTGGCCTTCCTGGCACTACTGGATGGAGCCCTCCAGCTCTGCATCCTGCAGCCTTCCAAAGTCTCTCCTGAGAGTGCCAAGGGGACTCCGATTCTTATGCTTCTCAAAGACCCTTATATCCTGGTGGCTGCTGGTTCCATCTGCTTTGCCAACATGGGAGTCGCCATTCTGGAACCCACACTGCCCATCTGGATGATGCAGACCATGTGCTCCCCTGAGTGGCAGCTAGGTCTGGCTTTCTTGCCTGCCAGTGTGTCCTACCTCATTGGCACCAACCTCTTCGGTGTGCTGGCCAATAAGATGGGTCGGTGGCTGTGCTCCTTGGTTGGGATGGTAGTGGTTGGTACCAGCTTGCTCTGTGTCCCACTGGCTCGCGATATTTTTGGTCTCATTGGCCCCAATGCCGGCCTTGGCTTTGCCATAGGTATGGTGGATTCCTCTCTGATGCCCATCATGGGACACCTGGTGGACCTGCGGCACACCTCAGTGTATGGGAGTGTCTACGCCATTGCTGACGTGGCTTTTTGTGTGGGCTTTGCTATTGGACCGTCCACTGGGGGTGCCATTGTGCAGGCCATTGGTTTCCCCTGGCTCATGGTCATCATTGGGGTGGTTAACATCGTCTATGCTCCTCTCTGCTACTTCCTGCGAAACCCCCCAGCCAAGGAGGAGAAGCTTGCTATTCTGAGCCAGGACTGCCCCATGGAGACCCGGATATACACAACCCAGAAGCCCACAGAGGAATTTCCCCTGGGGAAGAATGGAGATGAGGACCCTGACAGTGAGGAGTAG

Related Sequences

XP_004848312.1 Protein

Slc18a1 PREDICTED: chromaffin granule amine transporter isoform X1 [Heterocephalus glaber]

Length: 525 aa      View alignments
>XP_004848312.1
MLWGVLDASQQWLKEGRESRQLVLVVVFVALLLDNMLLTVVVPIVPTFLYATEFEESNSSLHTGHSLSSLQTPTPLAFSGIFSFFDNITIVVEESVPRSTAWPSGSSGTIPPPVAVASSAPKNNCLQGTEFLEEENIRVGVLFASKALMQLLVNPFVGPLTNRVGYHIPMFAGFVIMFLSTTMFAFSGTYSLLFVARALQGIGSSFSSVAGLGMLASVYTDDYERGKVMGIALGGLALGVLVGAPFGSVMYEFVGKSAPFLILAFLALLDGALQLCILQPSKVSPESAKGTPILMLLKDPYILVAAGSICFANMGVAILEPTLPIWMMQTMCSPEWQLGLAFLPASVSYLIGTNLFGVLANKMGRWLCSLVGMVVVGTSLLCVPLARDIFGLIGPNAGLGFAIGMVDSSLMPIMGHLVDLRHTSVYGSVYAIADVAFCVGFAIGPSTGGAIVQAIGFPWLMVIIGVVNIVYAPLCYFLRNPPAKEEKLAILSQDCPMETRIYTTQKPTEEFPLGKNGDEDPDSEE