Details from NCBI annotation

Gene Symbol Csgalnact1
Gene Name chondroitin sulfate N-acetylgalactosaminyltransferase 1
Entrez Gene ID 101700905

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CSGALNACT1 ENSCPOG00000005259 (Guinea pig)

Gene Details

chondroitin sulfate N-acetylgalactosaminyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004728, Guinea pig)

Protein Percentage 96.4%
CDS Percentage 92.49%
Ka/Ks Ratio 0.04906 (Ka = 0.0164, Ks = 0.3342)

CSGALNACT1 ENSG00000147408 (Human)

Gene Details

chondroitin sulfate N-acetylgalactosaminyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000411816, Human)

Protein Percentage 92.61%
CDS Percentage 87.31%
Ka/Ks Ratio 0.04987 (Ka = 0.0347, Ks = 0.6957)

Csgalnact1 ENSMUSG00000036356 (Mouse)

Gene Details

chondroitin sulfate N-acetylgalactosaminyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000077459, Mouse)

Protein Percentage 92.42%
CDS Percentage 86.49%
Ka/Ks Ratio 0.05491 (Ka = 0.038, Ks = 0.6925)

Csgalnact1 ENSRNOG00000013024 (Rat)

Gene Details

chondroitin sulfate N-acetylgalactosaminyltransferase 1 (Csgalnact1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017822, Rat)

Protein Percentage 91.67%
CDS Percentage 85.8%
Ka/Ks Ratio 0.05681 (Ka = 0.0421, Ks = 0.7408)

Genome Location

Sequence Coding sequence

Length: 1587 bp    Location: 15367243..15200713   Strand: -
>XM_004848247.1
ATGGTCCGCCGCGGCCTGCTGGGGTGGATTTCCCGGGTGGTGGTCCTGCTTGTGCTGCTCTGCTGCGCCATCTCCGTCCTCTACATGCTGGCCTGCACCCCCAAAGGCGACGAGGAGCAGCTGGGGCTGCCCAGGGCCAACGGTCCCACAGGGAAAGAGGGCTACCAGGCCGCGCTGCAGGAGCGCGAGGAACAGCACCGCAACTATGTCAGCAGCCTCAAGCGGCAGATCGCTCAGCTCAAGGAAGAGCTGCAGGGGCGCAGCGAGCAGCTGCGGGGTGCGCAGGACCAGGCCAGCGAGGCGGCAGGCCGCGGCCCCGATCCCAAAGCGCAGGCGCAGGCCGACCTGCTGACCTTCCTTCGCGCGCAGGCGGACAAGGCCGAGGTGCACGCAGGGGTCAAGCTGGCCACCGAGTATGCTGCGGTGCCTTTCGACAGCTTCACCCTGCAGAAAGTGTACCAGCTGGAGACCGGCCTGACTCGCCATCCCGAGGAGAAGCCGGCGAGGAAAGACAAGCGTGACGAGCTGGTGGAAGCCATCGAGTCGGCCCTGGAGAGCCTGAACAGCCCCTCCGAGAGCGGCCCGAACCAGCGTCCGTACACGGCCTCGGACTTCATAGAAGGGATCTATCGAACAGAAAAGGATAAAGGCACTTTGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGACTTGTCTTGTTTCGACCGTTTGGCCCAATCATGAAAGTGAAAAAGGAAAAGCTCAACCTGGCCAGCACACTTATTAACGTTATCGTGCCCTTAGCCAAAAGGGCAGACAAGTTCCGGCAGTTCATGCAGAATTTCAGGGAAATGTGCATCCAACAAGATGGGAGAATTCATCTCACCGTTGTTTACTTTGGGAAAGAAGAAATGAATGAAGTCAAAGGAATACTTGAAAACACTTCCAAAGCTGCCAACTTCAGGAACTTCACATTCATCCAACTGAATGGAGAATTTTCCCGGGGAAAGGGACTCGATGTCGGAGCCCGTTTCTGGAAGGGCAGCAACGTCCTTCTATTTTTCTGTGACGTGGACATTTATTTCACCTCAGAGTTCCTCAACACGTGCAGGCTGAACACACAGCCAGGGAAGAAGGTGTTTTATCCAGTCCTCTTTAGTCAGTACAACCCTGGTATAATCTACGGCCATCACGATGCCATCCCACCTCTGGAACAGCAGCTGGTCATAAAGAAGGAAACTGGATTTTGGAGAGACTTTGGATTTGGGATGACATGTCAGTATCGCTCAGACTTCATCAACATAGGTGGGTTTGATTTGGATATCAAAGGCTGGGGCGGAGAGGACGTGCACCTGTATCGAAAGTATCTCCATAGCAACCTCATAGTGGTGAGGACTCCCGTTCGGGGACTCTTCCACCTGTGGCACGAGAAGCGCTGTGTGGATGAGCTGACCCCTGAGCAGTACAAGATGTGCATGCAGTCCAAGGCCATGAACGAGGCGTCCCATGGGCAGCTGGGGATGCTGGTCTTCCGGCACGAGATAGAGGCTCACCTTCGCAAACAGAAACAGAAGATCAGCAGCAAAAAAACATAA

Related Sequences

XP_004848304.1 Protein

Csgalnact1 PREDICTED: chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Heterocephalus glaber]

Length: 528 aa      View alignments
>XP_004848304.1
MVRRGLLGWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLGLPRANGPTGKEGYQAALQEREEQHRNYVSSLKRQIAQLKEELQGRSEQLRGAQDQASEAAGRGPDPKAQAQADLLTFLRAQADKAEVHAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPARKDKRDELVEAIESALESLNSPSESGPNQRPYTASDFIEGIYRTEKDKGTLYELTFKGDHKHEFKRLVLFRPFGPIMKVKKEKLNLASTLINVIVPLAKRADKFRQFMQNFREMCIQQDGRIHLTVVYFGKEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAIPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCVDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKQKISSKKT