Details from NCBI annotation

Gene Symbol Rnf20
Gene Name ring finger protein 20, E3 ubiquitin protein ligase, transcript variant X5
Entrez Gene ID 101711656

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNF20 ENSCPOG00000012903 (Guinea pig)

Gene Details

ring finger protein 20, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011615, Guinea pig)

Protein Percentage 95.49%
CDS Percentage 89.81%
Ka/Ks Ratio 0.02669 (Ka = 0.0111, Ks = 0.4162)

RNF20 ENSG00000155827 (Human)

Gene Details

ring finger protein 20, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000373772, Human)

Protein Percentage 97.85%
CDS Percentage 91.59%
Ka/Ks Ratio 0.02824 (Ka = 0.0112, Ks = 0.3983)

Rnf20 ENSMUSG00000028309 (Mouse)

Gene Details

ring finger protein 20

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000128546, Mouse)

Protein Percentage 97.02%
CDS Percentage 89.65%
Ka/Ks Ratio 0.02552 (Ka = 0.0144, Ks = 0.5625)

Rnf20 ENSRNOG00000006087 (Rat)

Gene Details

ring finger protein 20, E3 ubiquitin protein ligase (Rnf20), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056614, Rat)

Protein Percentage 96.4%
CDS Percentage 87.77%
Ka/Ks Ratio 0.02325 (Ka = 0.0175, Ks = 0.7507)

Genome Location

Sequence Coding sequence

Length: 2928 bp    Location: 9783229..9761066   Strand: -
>XM_004848205.1
ATGTCAGGAGTTGGAAATAAAAGAGCAGCTGGAGAGCCTGGCACATCCATGCTTCCAGAGAAGAAAGCAGCTGTTGAAGATTCTGGGACTACGGTGGAAACAATTAAGCTAGGGGGTGTTTCTTCAACGGAGGAGTCAGACATCCGAACACTGCAAACCAAAAACCGCAAGCTCGCAGAAATGCTAGATCAGCGGCAGGCCATTGAGGATGAACTTCGTGAGCACATTGAAAAATTGGAACGGCGGCAGGCGACTGATGATGCCTCCCTGTTGATTGTCAACCGGTACTGGAGTCAGTTTGATGAAAACATCCGTATCATCCTTAAACGTTATGATCTGGAGCAGGGTTTAGGAGATCTACTCACAGAAAGGAAAGCCCTTGTTGTGCCAGAACCGGAACCTGACTCAGATAGCAATCAAGAACGCAAAGATGACCGAGAGAGAGGGGAGGGGCAAGAGCCAGCTTTCTCTTTCCTTGCTACTTTGGCCAGCAGTTCCAGTGAAGAGATGGAATCTCAGCTGCAGGAGCGTGTGGAGTCCTCCCGCCGAGCAGTATCCCAAATTGTGACTGTCTATGATAAACTACAAGAAAAAGTGGAGCTTTTATCCCGGAAACTGAACAGTGGAGATAATCTGATAGTGGAGGAAGCAGTGCAGGAGTTGAATTCCTTCCTCATACAAGAGAATATGAGGCTACAGGAATTGACAGACTTACTTCAGGAGAAGCATCATACCATGTCTCAAGAGTTCTCCAAGTTGCAGAGTAAGGTGGAGACAGCTGAGTCACGAGGGTCTGACCTGGAGTCTATGATTGATGATCTGCAGTGGGATATTGACAAAATTCGCAAACGAGAACAAAGACTCAACCGACACTTAGCAGAAGTTCTAGAACGGGTGAATTCAAAAGGTTACAAGGTATATGGTGCAGGGAGCAGTCTCTATGGTGGCACAATCACTATCAATGCCCGGAAGTTTGAGGAAATGAATGCAGAGCTTGAGGAGAACAAAGAGTTGGCTCAGAACCGACACTGTGAACTGGAGAAACTTCGGCAAGACTTTGAGGAGGTCACTACCCAGAATGAAAAGTTGAAGGTGGAACTGCGGAGTGCAGTGGAGGAAGTGGTTAAGGAAACCCCGGAATATCGTTGCATGCAGTCACAGTTCTCAGTGCTGTACAATGAGAGCCTGCAGTTGAAAGCACACCTGGATGAGGCGCGAACCCTGCTGCATGGCACCAGGGGAACACACCAGCGCCAAGTTGAGCTCATTGAGCGAGATGAAGTTAGTCTTCATAAGAAACTGAGGACTGAAGTGATTCAGCTGGAAGATACGCTGGCCCAGGTCCGCAAGGAGTACGAAATGCTAAGGATAGAATTTGAGCAGACCCTTGCTGCTAATGAGCAAGCAGGCCCTATAAACCGGGAGATGCGCCATCTCATCAGTAGCCTCCAGAATCACAATCACCAGCTGAAAGGGGAGGTCCTGAGGTATAAGCGGAAACTGAGAGAAGCCCAATCCGACCTGAACAAGACACGTCTGCGTAGTGGCAGTTCCCTTCTGCAGTCCCAGTCTAGTACTGAGGACCCTAAGGATGAACCTGCAGAGACAAAACAGGATTCCGAGGACTTATCCATCCAGTCTTCAGCATCAAAGTCATCTCAGGAGGATGTCAATGAAATTAAGTCCAAACGAGATGAAGAAGAGAGAGAACGAGAAAGGAAGGAGAAAGAAAGGGAGCGAGAAAGAGAACGAGAGAAGGAAAAGGAGAGAGAACGAGAGAAGCAGAAACTGAAAGAATCAGAAAAAGAGAGAGATTCTGTGAAGGATAAAGAAAAGGGGAAACATGATGATGGAAGGAAAAAGGAAGCAGAAATTATTAAACAACTGAAGATTGAACTGAAGAAGGCACAAGAGAGCCAAAAGGAGATGAAACTATTGCTAGATATGTACCGCTCTGCCCCAAAGGAACAGAGGGACAAAGTTCAGTTAATGGCAGCTGAGAAGAAGTCTAAGGCAGAGTTGGAAGATCTAAGGCAAAGACTCAAGGATCTAGAGGAGAAAGAGAAAAAAGAAAACAGGAAGATGGCTGATGAGGAGGCCTTGCGGAAGATCCGGGCGGTAGAGGAGCAGATTGAGTACTTGCAGAAGAAGCTGGCCATGGCCAAGCAGGAGGAAGAAGCTCTCCTCTCTGAGATGGATGTCACAGGCCAGGCCTTTGAAGACATGCAGGAACAAAATATCCGCTTGATGCAGCAGTTGCGGGAGAAGGATGATGCAAATTTTAAGCTCATGTCAGAGCGTATCAAGTCTAATCAGATCCATAAGTTGCTGAAAGAAGAGAAGGAGGAGCTGGCAGACCAAGTTTTGACTCTGAAGACTCAGGTCGATGCCCAGTTACAAGTAGTAAGGAAACTGGAAGAGAAGGAACACCTGCTGCAGAGCAACATTGGCACAGGAGAGAAGGAGCTGGGGCTTAGGACTCAAGCGTTGGAGATGAACAAGCGCAAGGCAATGGAGGCAGCTCAGCTTGCAGATGACCTCAAAGCCCAGCTGGAATTGGCTCAGAAGAAGCTACATGATTTTCAGGATGAGATCGTGGAGAACAGTGTCACCAAAGAAAAGGACATGTTCAATTTTAAACGAGCCCAAGAGGACATCTCTAGGCTTCGAAGGAAGTTGGAGACCACAAAGAAACCAGACAATGTACCCAAATGTGATGAGATTCTGATGGAGGAGATTAAGGATTACAAGGCACGTTTGACCTGTCCATGCTGCAACATGCGAAAAAAGGATGCTGTACTTACCAAGTGTTTTCACGTTTTTTGTTTTGAATGTGTGAAGACGCGCTATGACACCCGTCAGCGCAAATGTCCCAAGTGTAATGCTGCTTTTGGTGCCAATGATTTCCACCGCATCTACATTGGTTGA

Related Sequences

XP_004848262.1 Protein

Rnf20 PREDICTED: E3 ubiquitin-protein ligase BRE1A isoform X5 [Heterocephalus glaber]

Length: 975 aa      View alignments
>XP_004848262.1
MSGVGNKRAAGEPGTSMLPEKKAAVEDSGTTVETIKLGGVSSTEESDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLEQGLGDLLTERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLATLASSSSEEMESQLQERVESSRRAVSQIVTVYDKLQEKVELLSRKLNSGDNLIVEEAVQELNSFLIQENMRLQELTDLLQEKHHTMSQEFSKLQSKVETAESRGSDLESMIDDLQWDIDKIRKREQRLNRHLAEVLERVNSKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRHCELEKLRQDFEEVTTQNEKLKVELRSAVEEVVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRGTHQRQVELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLISSLQNHNHQLKGEVLRYKRKLREAQSDLNKTRLRSGSSLLQSQSSTEDPKDEPAETKQDSEDLSIQSSASKSSQEDVNEIKSKRDEEERERERKEKEREREREREKEKEREREKQKLKESEKERDSVKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKSKAELEDLRQRLKDLEEKEKKENRKMADEEALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMFNFKRAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG