Details from NCBI annotation

Gene Symbol Abca1
Gene Name ATP-binding cassette, sub-family A (ABC1), member 1, transcript variant X2
Entrez Gene ID 101704546

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 6270 bp    Location: 6482481..6588664   Strand: +
>XM_004848192.1
ATGCTAAGGGCTGATGTCCGTCTCCGCAAGGTATTTTTGCAAGGTTACCAATTACATTTGACCAGTCTGTGCAATGGATCAAACTTAGATGTGATTAAACTTGGTGACCCTGAAATTTCTGAGCTTTGTGGTCTACCAAGGGAGAAACTGGATGCAGCAGAGTGGATTCTTCGTTCCAACATAGACATCCTCAAGCCCATTGTGAGAGGACTGAACTCTACATCTCCCTTTCCAACTGAACATTTGGCTGAAGCCACAAGAACTTTATTAGACAGTCTTGGGAGTCTGGCCCAAGAGCTATTCAGCATGAGGAGCTGGAGTGACATGCGGCAGGAGGTGATGTTTCTGACCAATATGAATGGCACTAGTTCTTCCGCCCAGATATACCAAGCTGTGTCCCGCATCGTCTGTGGCCATCCAGAGGGTGGGGGGCTACAGATCAAGTCTCTCAACTGGTACGAGGACAACAACTACAAAGCCCTCTTTGGAGGCAATGGTACCGAGGAAGATGCCGACACCTTGTATGACAATTCTACAACTCCTTACTGCAACGATTTGCTGAAGAATTTGGAGTCTAGTCCTCTTTCCCGCATTATTTGGAAAGCACTTAAGCCCCTGCTTGTCGGGAAGATCCTGTATACACCGGACACGCCAGCCACGAGGCAGGTGATGGCTGAGGTGAACAAGACCTTCCAGGAACTGGCTGTATTCCATGATGTAGAAGGCATGTGGCAAGAGCTCAGCCCCAAGCTCTGGGCCTTCATGGAGAACAGCCAAGAAATGGACCTTGTCCGGATGCTATTGGACAGCAAAGGCAATGAACACTTTTGGGCACAGCAGTTGGATGGCTTAAACTGGACAGCCCAAGACATCCTGGCCTTTCTGGCCAAGCACCCAGAGGATGTCCAGCAGGTTAATGGCTCTGTGTACACCTGGAGAGAAGCTTTCAACGAGACCCACCAGGCAATCCAGACCATATCTCGATTCATGGAGTGTGTCAACCTCAACAAGCTGGAGCCCATTCCCACAGAGGTCCAGCTCATCAGCAAGTCCATGGAGCTGCTGGATGAGAGGAAGTTCTGGGCTGGTATTGTGTTTACAGGAGTCACTCCTGACAGTGTTGAGCTGCCCCGTCATGTCAAGTACAAGATTAGAATGGACATTGACAATGTGGAGAGGACAAATAAAATCAAGGATGGGTACTGGGACCCTGGTCCTCGGGCTGACCCCTTTGAGGATATGCGCTATGTCTGGGGGGGCTTTACCTACTTGCAAGATGTGGTGGAGCAGGCAATCATCAGAGTGCTGACAGGCACTGAGAAGAAAACTGGTGTCTATGTGCAGCAGATGCCCTATCCCTGTTATGTTGATGACATCTTCCTGCGGGTTATGAGCCGGTCAATGCCCCTCTTCATGACTCTGGCCTGGATTTACTCTGTGGCCGTGATCATCAAGGGTATCGTGTATGAAAAGGAGGCACGGCTGAAGGAGACCATGCGGATCATGGGCCTGGACAACAGCATCCTCTGGTTCAGCTGGTTCATCAGCAGCCTCATCCCTTTGCTCGTGAGCGCTGGCCTGCTGGTGGTTATCATGAAGCTAGGAAACCTGCTACCCTACAGTGACCCCAGTGTGGTGTTCGTCTTCCTGTCTGTTTTTGCCATGGTGACCGTCGTGCAGTGCTTCCTGATCAGCACACTCTTCTCCCGGGCCAACCTGGCTGCTGCCTGTGGGGGCATCATCTACTTCACCCTGTACCTGCCCTACGTCCTGTGTGTAGCATGGCAGGACTACGTGGGCTTCACAGCCAAGATCTTTGCAAGCCTTCTGTCTCCTGTGGCTTTGGGGTTTGGCTGTGAGTACTTTGCCCTTTTTGAGGAGCAGGGCATTGGGGTGCAGTGGGACAATCTCTTTGAGAGCCCAGTGGAGGAAGATGGCTTCAATCTCACCACGTCGGTCTCCATGATGCTGTTTGATGCCTTCCTCTATGGAGTGATGACATGGTACATCGAGGCTGTCTTTCCAGGTCAGTATGGAATTCCTAGGCCCTGGTACTTTCCTTGCACCAAGGCCTACTGGTTTGGTGAGGAAAGTGATGAGAAGAGACATCTTGGTTCCAGCCAGAAGGGAGTATCAGAAATCTGCATGGAAGAGGAACCCACCCACCTGAAGCTGGGCGTGTCTATTCAGAACCTGGTGAAGGTTTATCGAGATGGCATGAAAGTGGCTGTTGATGGCCTGGCACTGAATTTTTACGAAGGCCAGATCACTTCCTTCCTAGGCCACAACGGAGCAGGAAAGACAACTACCATGTCCATCCTGACTGGGTTGTTCCCTCCTACCTCGGGCACTGCCTACATCCTAGGGAAAGACATTCGCTCAGAGTTGAGCACCATCCGGCAGAACCTGGGGGTCTGTCCCCAGCATAATGTACTATTTGACATGCTGACTGTCGAAGAACACATCTGGTTCTATGCCTGCCTAAAGGGCCTCTCAGAGAAGCGTGTGAGAGCAGAGATGGAGCAGATGGCCCTGGATGTTGGTTTGCCACCTAGCAAACTAAAAAGCAAAACAAGTCAGCTGTCTGGTGGAATGCAGAGAAAGCTGTCTGTGGCCTTGGCCTTTGTAGGGGGATCCAAGGTTGTCATTCTAGATGAGCCTACAGCTGGTGTGGACCCTTATTCCCGCAGGGGAATCTGGGAGCTGTTGCTGAAATACCGACAAGGCCGCACGATTATTCTCTCCACCCACCACATGGATGAAGCGGACATCCTGGGGGACAGGATTGCCATCATTTCCCATGGGAAGCTGTGCTGTGTGGGCTCCTCCCTGTTTCTGAAGAACCAGCTGGGAACAGGCTACTACCTGACCCTGGTTAAGAAAGATGTGGAATCCTCCCTCAGTTCCTGCAGAAATAGCAGCAGCACTGTGTCGTACCTGAAGAAGGAGGACAGTGTTTCTCAGAGCAGTTCTGATGCTGGCCTGGGCAGCGACCATGAAAGTGACACACTGACCATCGATGTCTCTGCTATCTCCAACCTCATCAGGAAGCATGTGTCTGAAGCCCGGCTGGTGGAAGACATTGGACATGAGCTGACCTATGTGCTGCCCTATGAAGCTGCAAAGGAGGGAGCCTTTGTGGAACTCTTCCATGAGATTGATGACCGGCTTTCAGATCTGGGCATCTCCAGTTATGGCATCTCAGAGACTACCCTGGAAGAAATATTCCTCAAAGTGGCTGAAGAGAGTGGGGTGGATGCTGAGACCTCAGATGGTACCTTGCCAGCAAGGCGAAATAGACGAGCCTTTGGAGACAAGCAGAGCTGTCTTCGCCCATTCACCGAAGATGATGCTATTGATCCAAATGATTCTGACCTAGACCCAGAATCCAGAGAGACAGATCTGCTCAGTGGGATGGATGGCAAAGGCTCCTACCAGGTGAAGGGCTGGAAACTCGTACAACAGCAGTTTGTAGCCCTTTTGTGGAAGAGGCTGCTGATTGCCAGACGGAGTAGAAAAGGATTCTTTGCTCAGATTGTCCTGCCAGCTGTGTTTGTCTGTATTGCCCTGGTGTTCAGCCTGATTGTGCCACCCTTTGGCAAGTATCCCAGCCTGGAGCTTCAGCCCTGGATGTACGACGAGCAGTATACGTTTGTCAGCAATGATGCTCCTGAGGATATGGGTACCCAGGAACTCTTGAATGCCCTCACCAAAGACCCTGGCTTTGGGACCCGATGTATGGAAGGAAACCCAATCCCAAACACACCCTGCCTGGCAGGAGATAAAGAGTGGACCACTGCTCCAAATCCCCAGACCATCAAGGACCTCTTCCAAAAAGGGAACTGGACAATGGAGAACCCTTCACCTGCCTGCCAGTGTAGCAGTGACAAAATCAAGAAGATGCTGCCTGTATGTCCTGCAGGGGCAGGAGGGCTGCCACCTCCACAAAGAAAACAGAACACTGCAGACATCCTTCAGAACCTGACAGGAAGAAACATTTCTGACTATCTGGTGAAGACATATGTGCAGATCATAGCCAAAAGCTTAAAGAATAAGATCTGGGTGAATGAGTTTCGGTATGGTGGATTTTCCCTTGGTGTCAGTAATTCTCAGGCATTTCCTCCGAGTCAGGAAGTTAATGATGCCATCAAGCAAGTGAAGAAACTCTTGAAACTGGCCAAGGACAGTTCTGCCGATCGATTTCTCAACAGCTTGGGAAGGTTCATGACAGGATTGGACACCAAAAATAATGTCAAGGTGTGGTTCAATAACAAGGGCTGGCATGCTATCAGCTCTTTCCTGAATGTGATCAACAATGCCATTCTCCGGGCCAGTCTGCAGAAGGGAGAGAATCCTAGCGAGTATGGGATTACTGCTTTCAATCACCCCCTGAATCTCACCAAGCAGCAGCTCTCGGAGGTGGCTCTGATGACCACATCAGTAGATGTCGTCGTATCCATATGTGTCATCTTTGCAATGTCCTTTGTTCCGGCCAGCTTTGTTGTGTTCCTGATCCAGGAGCGGGTCAGCAAAGCAAAGCACCTGCAGTTTATCAGTGGAGTGAAGCCTGTCATCTACTGGCTCTCCAATTTTGTCTGGGATATGTGCAATTATGTGGTTCCTGCCACACTGGTCATTATCATCTTCATCTGCTTCCAGCAGAAGTCCTATGTGTCCTCCACCAACCTGCCTGTCCTAGCCCTTCTACTTTTGCTGTATGGGTGGTCAATCACACCTCTCATGTACCCAGCCTCCTTCGTGTTCAAGATCCCCAGCACAGCCTATGTGGTGCTCACCAGCGTGAACCTCTTCATCGGCATCAATGGCAGTGTGGCCACTTTTGTGCTGGAGCTCTTCACCAACAATAAGCTGAATAACATCAATGACATCCTGAAGTCTGTGTTCCTGATCTTCCCACATTTTTGTCTTGGACGAGGGCTCATTGATATGGTGAAAAATCAGGCAATGGCTGATGCCCTGGAAAGGTTTGGGGAGAATCGCTTTGTGTCACCCCTCTCTTGGGACCTGGTGGGACGAAACCTTTTCGCCATGGCTGTGGAAGGGGTCTTGTTCTTCCTTATTACTGTTCTGATCCAGTACAGATTCTTCTTCAGGCCCAGACCTGTGAATACAAAGCTTCCTCCTTTGAATGATGAAGATGAAGATGTAAGGCGAGAAAGACAGAGAATCCTGGATGGTGGAGGACAGAATGATATCTTGGAAATCAAGGAGTTGACTAAGATATATAGAAGGAAGAGGAAGCCTGCTGTTGACAGGATTTGTGTTGGTATTCCTCCTGGTGAGTGCTTTGGACTTCTGGGAGTTAACGGTGCTGGCAAATCATCAACCTTCAAGATGTTAACTGGAGATACCACTGTTACCCTAGGTGATGCTTTCCTTAACAAAAACAGCATCTTATCAGACATCCACGAAGTACATCAGAACATGGGTTACTGCCCTCAGTTTGATGCCATCACAGAGCTGCTGACGGGGAGGGAGCATGTGGAGTTCTTTGCCCTCTTGAGAGGAGTCCCAGAGAAAGAAGTTGGCAAGGTTGGTGAATGGGCAATTCGGAAACTGGGCCTGGTGAAGTATGGAGAAAAATATGCTGGTAACTATAGTGGAGGCAACAAGCGTAAGCTTTCAACAGCCATGGCTCTGATCGGCGGGTCTCCTGTGGTGTTTCTGGATGAACCAACCACAGGCATGGATCCTAAGGCCCGGAGATTCTTGTGGAATTGTGCCCTCAGCGTTGTCAAGGAGGGGAGATCGGTAGTGCTTACATCTCATAGCATGGAAGAATGTGAAGCTCTTTGCACTAGGATGGCAATTATGGTCAATGGGAGATTCAGGTGTCTTGGCAGTGTCCAACATCTTAAAAATAGGTTTGGAGATGGTTATACGATAGTGGTCAGAATAGCAGGGTCCAGTCCTGACCTGAAGCCTGTTCAGGAGTTCTTTGGACTCGCCTTTCCAGGAAGTGTCCTAAAAGAGAAACACCGGAACATGTTACAGTATCAGCTTCCGTCTTCATTATCTTCTCTGGCCAAGATATTCAGCATCCTCTCCCAGAGCAAAAAGCGACTCCACATAGAAGACTACTCTGTTTCTCAGACAACACTTGACCAAGTATTTGTGAACTTTGCCAAGGATCAAAGTGACGATGACCACTTAAAGGACCTGTCATTACACAAAAACCAGACAGTAGTGGATGTCACAGTTCTCACATCTTTTCTGCAGGATGAGAAAGTGAAAGAAAGTTATGTATGA

Related Sequences

XP_004848249.1 Protein

Abca1 PREDICTED: ATP-binding cassette sub-family A member 1 isoform X2 [Heterocephalus glaber]

Length: 2089 aa     
>XP_004848249.1
MLRADVRLRKVFLQGYQLHLTSLCNGSNLDVIKLGDPEISELCGLPREKLDAAEWILRSNIDILKPIVRGLNSTSPFPTEHLAEATRTLLDSLGSLAQELFSMRSWSDMRQEVMFLTNMNGTSSSAQIYQAVSRIVCGHPEGGGLQIKSLNWYEDNNYKALFGGNGTEEDADTLYDNSTTPYCNDLLKNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDVEGMWQELSPKLWAFMENSQEMDLVRMLLDSKGNEHFWAQQLDGLNWTAQDILAFLAKHPEDVQQVNGSVYTWREAFNETHQAIQTISRFMECVNLNKLEPIPTEVQLISKSMELLDERKFWAGIVFTGVTPDSVELPRHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFTYLQDVVEQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVIMKLGNLLPYSDPSVVFVFLSVFAMVTVVQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTAKIFASLLSPVALGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDAFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKAYWFGEESDEKRHLGSSQKGVSEICMEEEPTHLKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSELSTIRQNLGVCPQHNVLFDMLTVEEHIWFYACLKGLSEKRVRAEMEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAETSDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDLDPESRETDLLSGMDGKGSYQVKGWKLVQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYDEQYTFVSNDAPEDMGTQELLNALTKDPGFGTRCMEGNPIPNTPCLAGDKEWTTAPNPQTIKDLFQKGNWTMENPSPACQCSSDKIKKMLPVCPAGAGGLPPPQRKQNTADILQNLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNSQAFPPSQEVNDAIKQVKKLLKLAKDSSADRFLNSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRASLQKGENPSEYGITAFNHPLNLTKQQLSEVALMTTSVDVVVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVLFFLITVLIQYRFFFRPRPVNTKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTLGDAFLNKNSILSDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGSPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSSPDLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLAKIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDHLKDLSLHKNQTVVDVTVLTSFLQDEKVKESYV