Gene Symbol | Abca1 |
---|---|
Gene Name | ATP-binding cassette, sub-family A (ABC1), member 1, transcript variant X1 |
Entrez Gene ID | 101704546 |
For more information consult the page for NW_004624758.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
ATP-binding cassette, sub-family A (ABC1), member 1
Protein Percentage | 94.33% |
---|---|
CDS Percentage | 92.99% |
Ka/Ks Ratio | 0.15684 (Ka = 0.0327, Ks = 0.2086) |
ATP-binding cassette, sub-family A (ABC1), member 1
Protein Percentage | 94.51% |
---|---|
CDS Percentage | 91.45% |
Ka/Ks Ratio | 0.09906 (Ka = 0.0295, Ks = 0.2975) |
ATP-binding cassette, sub-family A (ABC1), member 1
Protein Percentage | 93.45% |
---|---|
CDS Percentage | 88.07% |
Ka/Ks Ratio | 0.06491 (Ka = 0.0337, Ks = 0.5194) |
ATP-binding cassette, subfamily A (ABC1), member 1 (Abca1), mRNA
Protein Percentage | 92.18% |
---|---|
CDS Percentage | 87.65% |
Ka/Ks Ratio | 0.07935 (Ka = 0.0408, Ks = 0.5146) |
>XM_004848191.1 ATGGCTTGTTGGCCTCAGCTGAGGTTGCTGCTATGGAAGAACCTGACTTTCAGAAGAAGACAAACATGTCAGCTATTGCTGGAAGTGGCCTGGCCTCTATTTATCTTCCTGATCTTGATCTCTGTTCGGCTGAACTACCCACCCTACGAACAACATGAATGCCACTTTCCAAACAAAGCCTTGCCTTCTGCAGGAACGCTTCCTTGGGTTCAGGGGATCATCTGTAATGCTAACAACCCCTGTTTCCGTTATCCGACTCCTGGTGAGGCTCCTGGGGTTGTTGGAAACTTTAACAAATCCATTGTGTCTCGCCTGTTCTCAGATGCTCGGAGGCTTCTTTTATACAGCCGGAAAGACACCAGCATAAAGGACATATACAAAGTTCTGAGGACCTTAAAGCAGATTGAGAATTCCAGCCCAAGATTGAAGCTTCAGGATTTCCTGATGGACAGTGAAACCTTCTCTGGATTCCTATATCACAATCTCTCTCTCTCAAGGCCTACTGTGGACAACATGCTAAGGGCTGATGTCCGTCTCCGCAAGGTATTTTTGCAAGGTTACCAATTACATTTGACCAGTCTGTGCAATGGATCAAACTTAGATGTGATTAAACTTGGTGACCCTGAAATTTCTGAGCTTTGTGGTCTACCAAGGGAGAAACTGGATGCAGCAGAGTGGATTCTTCGTTCCAACATAGACATCCTCAAGCCCATTGTGAGAGGACTGAACTCTACATCTCCCTTTCCAACTGAACATTTGGCTGAAGCCACAAGAACTTTATTAGACAGTCTTGGGAGTCTGGCCCAAGAGCTATTCAGCATGAGGAGCTGGAGTGACATGCGGCAGGAGGTGATGTTTCTGACCAATATGAATGGCACTAGTTCTTCCGCCCAGATATACCAAGCTGTGTCCCGCATCGTCTGTGGCCATCCAGAGGGTGGGGGGCTACAGATCAAGTCTCTCAACTGGTACGAGGACAACAACTACAAAGCCCTCTTTGGAGGCAATGGTACCGAGGAAGATGCCGACACCTTGTATGACAATTCTACAACTCCTTACTGCAACGATTTGCTGAAGAATTTGGAGTCTAGTCCTCTTTCCCGCATTATTTGGAAAGCACTTAAGCCCCTGCTTGTCGGGAAGATCCTGTATACACCGGACACGCCAGCCACGAGGCAGGTGATGGCTGAGGTGAACAAGACCTTCCAGGAACTGGCTGTATTCCATGATGTAGAAGGCATGTGGCAAGAGCTCAGCCCCAAGCTCTGGGCCTTCATGGAGAACAGCCAAGAAATGGACCTTGTCCGGATGCTATTGGACAGCAAAGGCAATGAACACTTTTGGGCACAGCAGTTGGATGGCTTAAACTGGACAGCCCAAGACATCCTGGCCTTTCTGGCCAAGCACCCAGAGGATGTCCAGCAGGTTAATGGCTCTGTGTACACCTGGAGAGAAGCTTTCAACGAGACCCACCAGGCAATCCAGACCATATCTCGATTCATGGAGTGTGTCAACCTCAACAAGCTGGAGCCCATTCCCACAGAGGTCCAGCTCATCAGCAAGTCCATGGAGCTGCTGGATGAGAGGAAGTTCTGGGCTGGTATTGTGTTTACAGGAGTCACTCCTGACAGTGTTGAGCTGCCCCGTCATGTCAAGTACAAGATTAGAATGGACATTGACAATGTGGAGAGGACAAATAAAATCAAGGATGGGTACTGGGACCCTGGTCCTCGGGCTGACCCCTTTGAGGATATGCGCTATGTCTGGGGGGGCTTTACCTACTTGCAAGATGTGGTGGAGCAGGCAATCATCAGAGTGCTGACAGGCACTGAGAAGAAAACTGGTGTCTATGTGCAGCAGATGCCCTATCCCTGTTATGTTGATGACATCTTCCTGCGGGTTATGAGCCGGTCAATGCCCCTCTTCATGACTCTGGCCTGGATTTACTCTGTGGCCGTGATCATCAAGGGTATCGTGTATGAAAAGGAGGCACGGCTGAAGGAGACCATGCGGATCATGGGCCTGGACAACAGCATCCTCTGGTTCAGCTGGTTCATCAGCAGCCTCATCCCTTTGCTCGTGAGCGCTGGCCTGCTGGTGGTTATCATGAAGCTAGGAAACCTGCTACCCTACAGTGACCCCAGTGTGGTGTTCGTCTTCCTGTCTGTTTTTGCCATGGTGACCGTCGTGCAGTGCTTCCTGATCAGCACACTCTTCTCCCGGGCCAACCTGGCTGCTGCCTGTGGGGGCATCATCTACTTCACCCTGTACCTGCCCTACGTCCTGTGTGTAGCATGGCAGGACTACGTGGGCTTCACAGCCAAGATCTTTGCAAGCCTTCTGTCTCCTGTGGCTTTGGGGTTTGGCTGTGAGTACTTTGCCCTTTTTGAGGAGCAGGGCATTGGGGTGCAGTGGGACAATCTCTTTGAGAGCCCAGTGGAGGAAGATGGCTTCAATCTCACCACGTCGGTCTCCATGATGCTGTTTGATGCCTTCCTCTATGGAGTGATGACATGGTACATCGAGGCTGTCTTTCCAGGTCAGTATGGAATTCCTAGGCCCTGGTACTTTCCTTGCACCAAGGCCTACTGGTTTGGTGAGGAAAGTGATGAGAAGAGACATCTTGGTTCCAGCCAGAAGGGAGTATCAGAAATCTGCATGGAAGAGGAACCCACCCACCTGAAGCTGGGCGTGTCTATTCAGAACCTGGTGAAGGTTTATCGAGATGGCATGAAAGTGGCTGTTGATGGCCTGGCACTGAATTTTTACGAAGGCCAGATCACTTCCTTCCTAGGCCACAACGGAGCAGGAAAGACAACTACCATGTCCATCCTGACTGGGTTGTTCCCTCCTACCTCGGGCACTGCCTACATCCTAGGGAAAGACATTCGCTCAGAGTTGAGCACCATCCGGCAGAACCTGGGGGTCTGTCCCCAGCATAATGTACTATTTGACATGCTGACTGTCGAAGAACACATCTGGTTCTATGCCTGCCTAAAGGGCCTCTCAGAGAAGCGTGTGAGAGCAGAGATGGAGCAGATGGCCCTGGATGTTGGTTTGCCACCTAGCAAACTAAAAAGCAAAACAAGTCAGCTGTCTGGTGGAATGCAGAGAAAGCTGTCTGTGGCCTTGGCCTTTGTAGGGGGATCCAAGGTTGTCATTCTAGATGAGCCTACAGCTGGTGTGGACCCTTATTCCCGCAGGGGAATCTGGGAGCTGTTGCTGAAATACCGACAAGGCCGCACGATTATTCTCTCCACCCACCACATGGATGAAGCGGACATCCTGGGGGACAGGATTGCCATCATTTCCCATGGGAAGCTGTGCTGTGTGGGCTCCTCCCTGTTTCTGAAGAACCAGCTGGGAACAGGCTACTACCTGACCCTGGTTAAGAAAGATGTGGAATCCTCCCTCAGTTCCTGCAGAAATAGCAGCAGCACTGTGTCGTACCTGAAGAAGGAGGACAGTGTTTCTCAGAGCAGTTCTGATGCTGGCCTGGGCAGCGACCATGAAAGTGACACACTGACCATCGATGTCTCTGCTATCTCCAACCTCATCAGGAAGCATGTGTCTGAAGCCCGGCTGGTGGAAGACATTGGACATGAGCTGACCTATGTGCTGCCCTATGAAGCTGCAAAGGAGGGAGCCTTTGTGGAACTCTTCCATGAGATTGATGACCGGCTTTCAGATCTGGGCATCTCCAGTTATGGCATCTCAGAGACTACCCTGGAAGAAATATTCCTCAAAGTGGCTGAAGAGAGTGGGGTGGATGCTGAGACCTCAGATGGTACCTTGCCAGCAAGGCGAAATAGACGAGCCTTTGGAGACAAGCAGAGCTGTCTTCGCCCATTCACCGAAGATGATGCTATTGATCCAAATGATTCTGACCTAGACCCAGAATCCAGAGAGACAGATCTGCTCAGTGGGATGGATGGCAAAGGCTCCTACCAGGTGAAGGGCTGGAAACTCGTACAACAGCAGTTTGTAGCCCTTTTGTGGAAGAGGCTGCTGATTGCCAGACGGAGTAGAAAAGGATTCTTTGCTCAGATTGTCCTGCCAGCTGTGTTTGTCTGTATTGCCCTGGTGTTCAGCCTGATTGTGCCACCCTTTGGCAAGTATCCCAGCCTGGAGCTTCAGCCCTGGATGTACGACGAGCAGTATACGTTTGTCAGCAATGATGCTCCTGAGGATATGGGTACCCAGGAACTCTTGAATGCCCTCACCAAAGACCCTGGCTTTGGGACCCGATGTATGGAAGGAAACCCAATCCCAAACACACCCTGCCTGGCAGGAGATAAAGAGTGGACCACTGCTCCAAATCCCCAGACCATCAAGGACCTCTTCCAAAAAGGGAACTGGACAATGGAGAACCCTTCACCTGCCTGCCAGTGTAGCAGTGACAAAATCAAGAAGATGCTGCCTGTATGTCCTGCAGGGGCAGGAGGGCTGCCACCTCCACAAAGAAAACAGAACACTGCAGACATCCTTCAGAACCTGACAGGAAGAAACATTTCTGACTATCTGGTGAAGACATATGTGCAGATCATAGCCAAAAGCTTAAAGAATAAGATCTGGGTGAATGAGTTTCGGTATGGTGGATTTTCCCTTGGTGTCAGTAATTCTCAGGCATTTCCTCCGAGTCAGGAAGTTAATGATGCCATCAAGCAAGTGAAGAAACTCTTGAAACTGGCCAAGGACAGTTCTGCCGATCGATTTCTCAACAGCTTGGGAAGGTTCATGACAGGATTGGACACCAAAAATAATGTCAAGGTGTGGTTCAATAACAAGGGCTGGCATGCTATCAGCTCTTTCCTGAATGTGATCAACAATGCCATTCTCCGGGCCAGTCTGCAGAAGGGAGAGAATCCTAGCGAGTATGGGATTACTGCTTTCAATCACCCCCTGAATCTCACCAAGCAGCAGCTCTCGGAGGTGGCTCTGATGACCACATCAGTAGATGTCGTCGTATCCATATGTGTCATCTTTGCAATGTCCTTTGTTCCGGCCAGCTTTGTTGTGTTCCTGATCCAGGAGCGGGTCAGCAAAGCAAAGCACCTGCAGTTTATCAGTGGAGTGAAGCCTGTCATCTACTGGCTCTCCAATTTTGTCTGGGATATGTGCAATTATGTGGTTCCTGCCACACTGGTCATTATCATCTTCATCTGCTTCCAGCAGAAGTCCTATGTGTCCTCCACCAACCTGCCTGTCCTAGCCCTTCTACTTTTGCTGTATGGGTGGTCAATCACACCTCTCATGTACCCAGCCTCCTTCGTGTTCAAGATCCCCAGCACAGCCTATGTGGTGCTCACCAGCGTGAACCTCTTCATCGGCATCAATGGCAGTGTGGCCACTTTTGTGCTGGAGCTCTTCACCAACAATAAGCTGAATAACATCAATGACATCCTGAAGTCTGTGTTCCTGATCTTCCCACATTTTTGTCTTGGACGAGGGCTCATTGATATGGTGAAAAATCAGGCAATGGCTGATGCCCTGGAAAGGTTTGGGGAGAATCGCTTTGTGTCACCCCTCTCTTGGGACCTGGTGGGACGAAACCTTTTCGCCATGGCTGTGGAAGGGGTCTTGTTCTTCCTTATTACTGTTCTGATCCAGTACAGATTCTTCTTCAGGCCCAGACCTGTGAATACAAAGCTTCCTCCTTTGAATGATGAAGATGAAGATGTAAGGCGAGAAAGACAGAGAATCCTGGATGGTGGAGGACAGAATGATATCTTGGAAATCAAGGAGTTGACTAAGATATATAGAAGGAAGAGGAAGCCTGCTGTTGACAGGATTTGTGTTGGTATTCCTCCTGGTGAGTGCTTTGGACTTCTGGGAGTTAACGGTGCTGGCAAATCATCAACCTTCAAGATGTTAACTGGAGATACCACTGTTACCCTAGGTGATGCTTTCCTTAACAAAAACAGCATCTTATCAGACATCCACGAAGTACATCAGAACATGGGTTACTGCCCTCAGTTTGATGCCATCACAGAGCTGCTGACGGGGAGGGAGCATGTGGAGTTCTTTGCCCTCTTGAGAGGAGTCCCAGAGAAAGAAGTTGGCAAGGTTGGTGAATGGGCAATTCGGAAACTGGGCCTGGTGAAGTATGGAGAAAAATATGCTGGTAACTATAGTGGAGGCAACAAGCGTAAGCTTTCAACAGCCATGGCTCTGATCGGCGGGTCTCCTGTGGTGTTTCTGGATGAACCAACCACAGGCATGGATCCTAAGGCCCGGAGATTCTTGTGGAATTGTGCCCTCAGCGTTGTCAAGGAGGGGAGATCGGTAGTGCTTACATCTCATAGCATGGAAGAATGTGAAGCTCTTTGCACTAGGATGGCAATTATGGTCAATGGGAGATTCAGGTGTCTTGGCAGTGTCCAACATCTTAAAAATAGGTTTGGAGATGGTTATACGATAGTGGTCAGAATAGCAGGGTCCAGTCCTGACCTGAAGCCTGTTCAGGAGTTCTTTGGACTCGCCTTTCCAGGAAGTGTCCTAAAAGAGAAACACCGGAACATGTTACAGTATCAGCTTCCGTCTTCATTATCTTCTCTGGCCAAGATATTCAGCATCCTCTCCCAGAGCAAAAAGCGACTCCACATAGAAGACTACTCTGTTTCTCAGACAACACTTGACCAAGTATTTGTGAACTTTGCCAAGGATCAAAGTGACGATGACCACTTAAAGGACCTGTCATTACACAAAAACCAGACAGTAGTGGATGTCACAGTTCTCACATCTTTTCTGCAGGATGAGAAAGTGAAAGAAAGTTATGTATGA
Abca1 PREDICTED: ATP-binding cassette sub-family A member 1 isoform X1 [Heterocephalus glaber]
Length: 2260 aa View alignments>XP_004848248.1 MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLNYPPYEQHECHFPNKALPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSRKDTSIKDIYKVLRTLKQIENSSPRLKLQDFLMDSETFSGFLYHNLSLSRPTVDNMLRADVRLRKVFLQGYQLHLTSLCNGSNLDVIKLGDPEISELCGLPREKLDAAEWILRSNIDILKPIVRGLNSTSPFPTEHLAEATRTLLDSLGSLAQELFSMRSWSDMRQEVMFLTNMNGTSSSAQIYQAVSRIVCGHPEGGGLQIKSLNWYEDNNYKALFGGNGTEEDADTLYDNSTTPYCNDLLKNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDVEGMWQELSPKLWAFMENSQEMDLVRMLLDSKGNEHFWAQQLDGLNWTAQDILAFLAKHPEDVQQVNGSVYTWREAFNETHQAIQTISRFMECVNLNKLEPIPTEVQLISKSMELLDERKFWAGIVFTGVTPDSVELPRHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFTYLQDVVEQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVIMKLGNLLPYSDPSVVFVFLSVFAMVTVVQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTAKIFASLLSPVALGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDAFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKAYWFGEESDEKRHLGSSQKGVSEICMEEEPTHLKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSELSTIRQNLGVCPQHNVLFDMLTVEEHIWFYACLKGLSEKRVRAEMEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAETSDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDLDPESRETDLLSGMDGKGSYQVKGWKLVQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYDEQYTFVSNDAPEDMGTQELLNALTKDPGFGTRCMEGNPIPNTPCLAGDKEWTTAPNPQTIKDLFQKGNWTMENPSPACQCSSDKIKKMLPVCPAGAGGLPPPQRKQNTADILQNLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNSQAFPPSQEVNDAIKQVKKLLKLAKDSSADRFLNSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRASLQKGENPSEYGITAFNHPLNLTKQQLSEVALMTTSVDVVVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVLFFLITVLIQYRFFFRPRPVNTKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTLGDAFLNKNSILSDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGSPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSSPDLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLAKIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDHLKDLSLHKNQTVVDVTVLTSFLQDEKVKESYV