Sequence details NCBI ID: XM_004848152.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ctnnal1
Gene Name catenin (cadherin-associated protein), alpha-like 1, transcript variant X2
Entrez Gene ID 101722186

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CTNNAL1 ENSCPOG00000005930 (Guinea pig)

Gene Details

catenin (cadherin-associated protein), alpha-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005350, Guinea pig)

Protein Percentage 94.44%
CDS Percentage 92.5%
Ka/Ks Ratio 0.12696 (Ka = 0.0305, Ks = 0.2405)

CTNNAL1 ENSG00000119326 (Human)

Gene Details

catenin (cadherin-associated protein), alpha-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000320434, Human)

Protein Percentage 93.3%
CDS Percentage 91.47%
Ka/Ks Ratio 0.11875 (Ka = 0.0339, Ks = 0.2855)

Ctnnal1 ENSMUSG00000038816 (Mouse)

Gene Details

catenin (cadherin associated protein), alpha-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036487, Mouse)

Protein Percentage 86.44%
CDS Percentage 83.65%
Ka/Ks Ratio 0.11342 (Ka = 0.0742, Ks = 0.6546)

Ctnnal1 ENSRNOG00000010593 (Rat)

Gene Details

catenin (cadherin associated protein), alpha-like 1 (Ctnnal1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014888, Rat)

Protein Percentage 85.62%
CDS Percentage 83.29%
Ka/Ks Ratio 0.11912 (Ka = 0.079, Ks = 0.6635)

Genome Location

Sequence Coding sequence

Length: 2196 bp    Location: 2504334..2568219   Strand: +
Raw sequence   
>XM_004848152.1
ATGGCCGCCTCTCCCGGCTCTGCCGGCGTCGGTGGCTCCGGAGCAATTCATGGCTCCAGCCCGCCGGGCTTCGCCTTCGACCCGGGACTCGAGATCAAAACCCGCTCGGTGGAGCAGACGCTGCTCCCGCTGGTCTCCCAGATCACCACACTTATTAATCATAAAGATAATACCAAAAAGTCGGATAAAACTCTGCAAGCGATTCAGCGTGTTGGGCAAGCTGTCAACCTTGCAGTTGGAAGATTTGTTAAAGTAGGAGAAGCTATAGCCAATGAAAACTGGGATTTGAAAGAAGAAATAAATATTGCCTGTATTGAAGCTAAACAAGCAGGAGAAACAATTGCAGCACTTACAGATGTAGCCAACTTGAATCATTCAGAATCTGATGGCCAGATCACAATTTTTGCAGACAAAACAGGAGTCATAAAAGCAGCAAGGTTACTTCTTTCCTCAGTGACAAAAGTGTTGCTGCTGGCAGACCGAGTAGTCATCAAACAGATAATAACATCAAGAAATAAGGTTCTTGCAACTATGGAAAGACTAGAGAAAGTCAATAGCTTCCAAGAGTTTGTCCAAATATTCAGTCAGTTCGGAAATGAAATGGTGGAGTTTGCACATCTAACTGGAGATAGACAAAATGATTTGAAAGATGAAAAAAAGAAGGCAAAAATGGCAGCAGCTCGGGCAGTGCTTGAAAAGTGTACCATGATGCTTCTCACCGCATCCAAGACATGTCTCAGGCATCCTAACTGTGAATCAGCCCATAAAAACAAAGAAGGAGTGTTTAACCGAATGAAAGTGGCTCTGGATAAAGTCATTGAAATTGTGACCGACTGTAAGCCACATGGAGAGACTGACACTTCATCTGTCAGTATTTTTCATGCAATTAAAGAATTCAAGGTGAATATTGAAGCTCTTCAGGAGAATCCTTACTTTCAGTCCAAAGAGAACTTCTCTGCGACATTGGAAGTCATCTTGGAGCAGATGGAGGACTTCACAGATTCTGCCTACACCAGCCATGAGCACAGAGAACGAATCTTGGAGCTGTCCACTCAGGCGAGGGTGGAACTGCAGCAGTTCCTCTCTGTGTGGATGCAAGCTCAAAGCAAGAAAACCAAAAGCATCACTGAAGAACTGGAGCTTACTATTTTGAAAATCAGTCACAGTCTCAATGAACTTAAGAAGGAACTTCATAGCACAGCAATGCATCTGGCAGCAGATCTCTTAAAATACCATGCGGATCATGTGGTTCTAAAAGCATTAAAACTTACTGGAGTAGAAGGAAATTTAGAAGCTTTGGCCGAATATGCCTGTAAACTGTCTGAACAGAAAGAACAGCTTACTGAGACCTGTCGATTGCTGAGACATGTATCTGGGACAGAATCCCTTGAGATAACTTGTATACATGCAGAAGAGACATTTCAGGTGACTGGTCAGCAGATAATTTCTGCTGCTGAAACACTAACATTACATCCATCTAGTAAAATTGCTAAAGAAAACCTGGATGTATTTTGTGAAGCTTGGGAATCTCAAATTAGTGACATGTCTATGCTGCTGAGAGAAATCAGTGATGTGTTTGAAGGAAGACGAGGAGAGAAGTATGGCTACCTTTCACTGCCAAAGCCAATGAAGAACAACGTAAACAAATCACTGAAGCCAGACAAGCCTGACTCTGAGGAGCAAGCCAAGATAGCAAAGCTTGGACTTAAGCTGGGCTTGCTTACTTCTGATGCCAACTGTGAAATCGAGAAGTGGGAAGATCAGGAGAATGAGATTGTTCGTTATGGACAGAACATGTCCAGGATGGCCTACTCTCTATATTTATTTACCAGAGGAGAAGGGCCTCTGAAAACTTCCCAGGATTTAATTCATCACCTAGAGGTTTTTGCTGCAGAGGGATTAAAGCTTACTTCAAGTGTACAAGCTTTTTCGAAACAGCTGAAAGATGATGACAAGCTTATGCTTCTCCTGGAAATAAACAAGCTAAGCCCTCTATGCCACCAGCTCCAGACAGTAACTAAAACATCTTTGCAGAATAAAGTATTTCTAAAGGTTGATAAGTGTATTACAAAGACAAGATCCATGATGGCTTTATTGGTTCAACTGCTCTCACTTTGCTATAAACTGCTGAAGAAGATGGAAAATAGCAGATGGGTCTCAGTTACAAATAAAGACACTGTGGACAGTAAAACTTGA

Related Sequences

XP_004848209.1 Protein

Ctnnal1 PREDICTED: alpha-catulin isoform X2 [Heterocephalus glaber]

Length: 731 aa      View alignments
>XP_004848209.1
MAASPGSAGVGGSGAIHGSSPPGFAFDPGLEIKTRSVEQTLLPLVSQITTLINHKDNTKKSDKTLQAIQRVGQAVNLAVGRFVKVGEAIANENWDLKEEINIACIEAKQAGETIAALTDVANLNHSESDGQITIFADKTGVIKAARLLLSSVTKVLLLADRVVIKQIITSRNKVLATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKKAKMAAARAVLEKCTMMLLTASKTCLRHPNCESAHKNKEGVFNRMKVALDKVIEIVTDCKPHGETDTSSVSIFHAIKEFKVNIEALQENPYFQSKENFSATLEVILEQMEDFTDSAYTSHEHRERILELSTQARVELQQFLSVWMQAQSKKTKSITEELELTILKISHSLNELKKELHSTAMHLAADLLKYHADHVVLKALKLTGVEGNLEALAEYACKLSEQKEQLTETCRLLRHVSGTESLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQISDMSMLLREISDVFEGRRGEKYGYLSLPKPMKNNVNKSLKPDKPDSEEQAKIAKLGLKLGLLTSDANCEIEKWEDQENEIVRYGQNMSRMAYSLYLFTRGEGPLKTSQDLIHHLEVFAAEGLKLTSSVQAFSKQLKDDDKLMLLLEINKLSPLCHQLQTVTKTSLQNKVFLKVDKCITKTRSMMALLVQLLSLCYKLLKKMENSRWVSVTNKDTVDSKT