Sequence details NCBI ID: XM_004848143.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ptpn3
Gene Name protein tyrosine phosphatase, non-receptor type 3, transcript variant X1
Entrez Gene ID 101719486

Database interlinks

Part of NW_004624758.1 (Scaffold)

For more information consult the page for NW_004624758.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTPN3 ENSCPOG00000009847 (Guinea pig)

Gene Details

protein tyrosine phosphatase, non-receptor type 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008836, Guinea pig)

Protein Percentage 95.5%
CDS Percentage 93.79%
Ka/Ks Ratio 0.11481 (Ka = 0.0223, Ks = 0.194)

PTPN3 ENSG00000070159 (Human)

Gene Details

protein tyrosine phosphatase, non-receptor type 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000363667, Human)

Protein Percentage 93.21%
CDS Percentage 90.36%
Ka/Ks Ratio 0.10056 (Ka = 0.0342, Ks = 0.3402)

Ptpn3 ENSMUSG00000038764 (Mouse)

Gene Details

protein tyrosine phosphatase, non-receptor type 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000075063, Mouse)

Protein Percentage 93.32%
CDS Percentage 88.39%
Ka/Ks Ratio 0.0705 (Ka = 0.0332, Ks = 0.4714)

Ptpn3 ENSRNOG00000011425 (Rat)

Gene Details

Tyrosine-protein phosphatase non-receptor type

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056382, Rat)

Protein Percentage 93.1%
CDS Percentage 88.72%
Ka/Ks Ratio 0.07853 (Ka = 0.0347, Ks = 0.4425)

Genome Location

Sequence Coding sequence

Length: 2808 bp    Location: 2011904..2170096   Strand: +
Raw sequence   
>XM_004848143.1
ATGGTGGAGCAAGAGGGATTATCCCCACATGGGCACCCTCCGGAAAACTGTCATTCAACCATAGTTATGACCTCCCGGTTACGCGCGCTGGGTGGAAGAATTAATAACATACGTACCTCTGAATTACCCAAAGAAAAAGCTCGATCTGAAGTCGTCTGCAGCATATGCTTTTTAGATGGCTTGGTACAGACCTTTAAAGTTAATAAACAAGACACTGGCCAGTCGCTTCTGGATATGGCATATGCCCACCTGGGTGTGACCGAAAAGGAGTATTTTGGCTTGCAACATGGTGAAGACTCAGCAGACTCCCCTAGATGGCTTGAATCAAGCAAACCTATCAGGAAGCAGTTGAAAGGAGGTTTCCCCTGTTCCCTGCATTTTCGAGTAAGATTTTTTATACCTGATCCCAACACACTGCAACAAGAACAAACCAGGCACTTGTATTTCTTACAACTGAAGATGGATATTTGTGAAGGAAGGTTAACGTGCCCTCTGAATTCAGCTGTGGTTCTGGCTTCCTATGCAGTACAATCTCATTTTGGAGACTTTAATTCTTCCATACATCATCCAGGCTATCTTGCAGACAGCCAGTTCATACCAGATCAAAACGATGATTTCTTGACCAAGGTGGAATCTCTCCACGAGCAACACAGTGGGCTAAAGCAATCAGAAGCCGAATCGTGCTACATCAACATAGCTCGGACCCTTGACTTCTATGGAGTGGAGCTGCACGGTGGTAGAGATCTGCACAATTTAGAGCTAATGATTGGAATTGCTTCTGCGGGCATTGCTGTGTACCGAAAATACATTTGCACAAGTTTCTATCCTTGGGTGAACATCCTCAAGATTTCTTTCAAAAGGAAAAAATTCTTTATACATCAGCGACAAAAACAGCCTGAATCCAGGGAACATATCGTGGCCTTCAACATGCTAAATTACCGATCTTGCAAAAATTTGTGGAAATCTTGTGTTGAGCACCATACCTTCTTTCAGGCAAAGAAGTTACTACCTCAAGAAAAGAATGTTCTGTCTCAGTACTGGACTCTGGGCTCCAGGAACCCCAAAAAGTCTGTAAATAACCAATACTGCAAGAAGTTGATTGGAGGGATGGTGTGGAACCCGGCCATGCGGAGGTCCTTGTCAGTGGAGCACCTAGAAACCAAGAGCCTGCCTTCCCGGTCCCCTCCAGTCACCCCCAACTGGCGAAGTCCTCGGCTCCGGCATGAGATCCGAAAACCCCGCCACTCCTCTGCGGATAACCTCGCAAACGAGATGACATACATTACAGAGACTGAAGATGTGTTTTATACCTACAAAGGCTCCCTGTCCCCCAAAGACAGTGATTCCGAAGTTTCTCAGAACCACAGCCCACACCGAGAGAGTTTATCTGAGAACAACCCAGCACAAAGATGCCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCTGCTCACTAGATGGAGTCGACCAGCAGTTCTTAGAGGACTACCACAGGGTGACCAAAGGGGGCTCCACTGAGGACACCAGCCAGTACTACTGTGACAAGAATGATAATGGTGACAGCTACTTAGTCTTGATCCGGATCACACCGGATGAAGATGGAAAATTTGGATTTAATCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTAGTCTCAAGGATAAACCCAGAGTCACCTGCTGACACCTGCATTCCTAAGCTGAATGAAGGGGATCAGATCGTGCTGATCAATGGCCGGGACATCTCAGAACACACCCATGACCAGGTGGTGATGTTCATCAAAGCTAGCCGGGAATCCCACTCAAGGGAGCTGGCCCTGGTGATCAGGAGGAAAGCTGTCCACTCATTTGCTGAGATCAGATCTGAAGATGAACTGAACCAGCTTTTCCCAGAGGCCATTTTCCCCATGTGTCCAGACGGTGTGGACACTTTGGAGGGATCCATGGAACTGCTAAAGAAGGGCCTTGAAAGTGGGACAGTGCTGATCCAGTTTGAGCAACTCTACAGAAAAAAGCCAGGTTTGCCCATCTCCTTTGCAAAGCTGCCACAAAATTTGGACAAAAACCGGTATAAAGATGTGCTGCCTTATGACATCACCCGGGTATTACTGCAGGGACACGAAGATTATATTAATGCAAGTTATGTGAACATGGAAATTCCTGCTGCTAACCTTGTGAACAAGTATATTGCCACTCAGGGACCCCTGCCACACACCTGTGCACAATTTTGGCAAGTCGTCTGGGATCAGAAGTTGTCATTGATTGTCATGTTGACAACTCTCACAGAGCGAGGGCGGACCAAATGTCACCAGTACTGGCCCGATCCGCCTGAGGTTATGGACCACGGCATCTTTCACATCCGGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGTCCCGAGAAATGCTGGTCACAAACACTGAGACTGGGGAAGAACATACAGTGACACATCTGCAGTACGTGGCGTGGCCTGACCATGGCGTGCCTGATGACTCCTCGGACTTCCTAGAATTTGTGAACTATGTGAGATCCCTGCGGGTGGATGGGGAGCCAGTCTTAGTTCACTGCAGTGCTGGAATAGGTCGAACTGGTGTGTTGGTCACTATGGAAACAGCCATGTGTTTAATTGAGAGAAAGCTGCCAGTTTGTCCATTGGATATCATCCGGAAAATGCGAGACCAGCGCGCCATGATGGTACAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGCAATTCTTCGTGTGTATGAAGAAGGCTTAGTCCAGATGCTGGATCCCAGTTAG

Related Sequences

XP_004848200.1 Protein

Ptpn3 PREDICTED: tyrosine-protein phosphatase non-receptor type 3 isoform X1 [Heterocephalus glaber]

Length: 935 aa      View alignments
>XP_004848200.1
MVEQEGLSPHGHPPENCHSTIVMTSRLRALGGRINNIRTSELPKEKARSEVVCSICFLDGLVQTFKVNKQDTGQSLLDMAYAHLGVTEKEYFGLQHGEDSADSPRWLESSKPIRKQLKGGFPCSLHFRVRFFIPDPNTLQQEQTRHLYFLQLKMDICEGRLTCPLNSAVVLASYAVQSHFGDFNSSIHHPGYLADSQFIPDQNDDFLTKVESLHEQHSGLKQSEAESCYINIARTLDFYGVELHGGRDLHNLELMIGIASAGIAVYRKYICTSFYPWVNILKISFKRKKFFIHQRQKQPESREHIVAFNMLNYRSCKNLWKSCVEHHTFFQAKKLLPQEKNVLSQYWTLGSRNPKKSVNNQYCKKLIGGMVWNPAMRRSLSVEHLETKSLPSRSPPVTPNWRSPRLRHEIRKPRHSSADNLANEMTYITETEDVFYTYKGSLSPKDSDSEVSQNHSPHRESLSENNPAQRCLTQKSSSSVSPSSNAPGSCSLDGVDQQFLEDYHRVTKGGSTEDTSQYYCDKNDNGDSYLVLIRITPDEDGKFGFNLKGGVDQKMPLVVSRINPESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASRESHSRELALVIRRKAVHSFAEIRSEDELNQLFPEAIFPMCPDGVDTLEGSMELLKKGLESGTVLIQFEQLYRKKPGLPISFAKLPQNLDKNRYKDVLPYDITRVLLQGHEDYINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPEVMDHGIFHIRCQSEDCTIAYVSREMLVTNTETGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDGEPVLVHCSAGIGRTGVLVTMETAMCLIERKLPVCPLDIIRKMRDQRAMMVQTSSQYKFVCEAILRVYEEGLVQMLDPS