Details from NCBI annotation

Gene Symbol Scarb2
Gene Name scavenger receptor class B, member 2, transcript variant X1
Entrez Gene ID 101715798

Database interlinks

Part of NW_004624757.1 (Scaffold)

For more information consult the page for NW_004624757.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCARB2 ENSCPOG00000012985 (Guinea pig)

Gene Details

scavenger receptor class B, member 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011691, Guinea pig)

Protein Percentage 88.56%
CDS Percentage 88.77%
Ka/Ks Ratio 0.21965 (Ka = 0.0675, Ks = 0.3074)

SCARB2 ENSG00000138760 (Human)

Gene Details

scavenger receptor class B, member 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000264896, Human)

Protein Percentage 88.49%
CDS Percentage 87.52%
Ka/Ks Ratio 0.14417 (Ka = 0.0604, Ks = 0.4187)

Scarb2 ENSMUSG00000029426 (Mouse)

Gene Details

scavenger receptor class B, member 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031377, Mouse)

Protein Percentage 84.52%
CDS Percentage 82.71%
Ka/Ks Ratio 0.12682 (Ka = 0.0847, Ks = 0.6677)

Scarb2 ENSRNOG00000002225 (Rat)

Gene Details

scavenger receptor class B, member 2 (Scarb2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003052, Rat)

Protein Percentage 85.77%
CDS Percentage 83.89%
Ka/Ks Ratio 0.13816 (Ka = 0.0806, Ks = 0.5832)

Genome Location

Sequence Coding sequence

Length: 1437 bp    Location: 14709125..14795039   Strand: +
>XM_004848034.1
ATGGGCAGATGCTGCTTCTACGCTGCGGGGACGCTGTCCCTGCTGCTGCTGGTGACCAGCGTCACGCTGCTCGTGGCCCGGGTCTTCCAGAAGGCCGTGGACCGGGCGGTCGAGAAGAATGTGGTGTTACGGAATGGGACTGAGGTCTTTCACTCCTGGGAGAAGCCCCCACTGCCTGTATACACCCAGTTCTACTTCTTCAACGTCACTAACCCGGAGGAGATCCTCCGCGGGGAGCCCCCTCTGCTAGAGGAAGTGGGGCCCTACACCTACAGGGAACTAAGAAACAAGGCAAATATTCAATTTGGAGACAATGGAACAACAATATCTGCTGTTAGCAACAAGGCATATGTTTTTGAACGAAATCAATCTGTTGGAGACCCTAAAGTTGATTTAATTAGAACATTAAATATTCCTGCATTGACTGCCATGGAGTGGACGCGGAACCCCTTCCTCCGGGACATCATCGAGGCTGTGCTCAAGGCCTACAAGCAGACGCTCTTCATCACCCACACTGTGCATGAGCTGCTCTGGGGCTACAAAGACGAGCTCTTGTCGCTGGTCCACGCGTTCAAACCGGACGTCTCCCCCTATTTCGGCCTGTTCTATGAAAAAAATGGGACTAATGATGGAGATTATGTTTTCCTAACTGGAGAAGACAGTTATCTTAACTTTACAAAGATTGTGGAGTGGAATGGAAAAACATCTCTTGACTGGTGGACAACAGACAAATGCAACATGATTAATGGGACAGATGGAGATTCTTTTCACCCACTAATAACCAAAGATGAAGTCCTTTATGTCTTCCCATCTGACTTCTGCAGGTCTGTATATATAACCTTCAGTGACTATGGGAGTGTAGAGGGGCTGCCCACCTTTCGGTATAAGGTGCCCGGAGAAATATTAGCCAATACCTCAGAAAATGCTGGCTTCTGTCTTCCTGAAGGAAACTGCCTGGGCACTGGAGTGCTGAATGTCAGCATCTGCAAGAACGGTGCACCCATTATTATGTCTTTCCCACACTTTTATCAAGCAGATGAGAGGTTTATTTCTGCCATACGAGGCTTGCATCCAAATAAAGAGGATCATGAGACTTTTGTGGACATTAATCCTTTGACTGGAATTATCCTAAGGGCAGCAAAGAGGTTCCAAATCAACATTTATGTCCAAAAGATTGATGACTTTATTGAAACAGGAGACATTAAAACCATGGTTTTCCCAGTGATGTATCTCAATGAGAGTGCTATCATTGATAAAGAGACTGCAAGTCGACTTAAGTCTGTAATTAACACTACTCTGATTGTCACCAACATACCCTACATTATCATGGCACTGGGTGTGTTCTTTGGTTTGATCTTCACCTGGCTTGCATGCCGAGGACAGGGATCTACGGATGAGGGAACAGCAGATGAAAGAGCACCCCTCATAAGAACTTAA

Related Sequences

XP_004848091.1 Protein

Scarb2 PREDICTED: lysosome membrane protein 2 isoform X1 [Heterocephalus glaber]

Length: 478 aa      View alignments
>XP_004848091.1
MGRCCFYAAGTLSLLLLVTSVTLLVARVFQKAVDRAVEKNVVLRNGTEVFHSWEKPPLPVYTQFYFFNVTNPEEILRGEPPLLEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERNQSVGDPKVDLIRTLNIPALTAMEWTRNPFLRDIIEAVLKAYKQTLFITHTVHELLWGYKDELLSLVHAFKPDVSPYFGLFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWWTTDKCNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYGSVEGLPTFRYKVPGEILANTSENAGFCLPEGNCLGTGVLNVSICKNGAPIIMSFPHFYQADERFISAIRGLHPNKEDHETFVDINPLTGIILRAAKRFQINIYVQKIDDFIETGDIKTMVFPVMYLNESAIIDKETASRLKSVINTTLIVTNIPYIIMALGVFFGLIFTWLACRGQGSTDEGTADERAPLIRT