Sequence details NCBI ID: XM_004848030.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Shroom3
Gene Name shroom family member 3, transcript variant X1
Entrez Gene ID 101713809

Database interlinks

Part of NW_004624757.1 (Scaffold)

For more information consult the page for NW_004624757.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 5187 bp    Location: 14249000..14187911   Strand: -
Raw sequence   
>XM_004848030.1
ATGATGCGGATATCTCAGGGCACAGTGGGCCCCCCCTGGCACCAAAGCTACCATTCCAGCTCCTCTACAAGTGACTTCTCCAGTTACGACCATGCATATCTGAGGAGGAGTCCTGACAGGTGCAGCTCCCAGGGGAGCATGGAGAGCTTGGAGCCCAGTGGGGGTTACCCACCCTGCCGTCTTCTCTCCCCTGCCAAGTCCACCAGCAGCATTGACCAGCTCAGCCACCTCCACAACAAGAGGGACTCGGCATATAGCTCCTTTTCCACCAGTTCTAGCATCTTGGAATACCCACCCCCTGGCATCTCTGGCCGAGAGCGCTCAGGATCCATGGACACTATCACTGCCCGAGGTGGCCTCCTGGAAGGGATGAGGCAAGCAGATATTCGCTATGTCAAGACAGTCTATGATCCCCGGAGGGGAGTCTCAGCTGAGTATGAGGTGAACTCTTCAGCTGCACTGCTCCAGGGTAGGGAGTCCCAAGCCTCAGCAGATGGCCAGGCCTATGATAAGTGGCAGAACATCCCTCGGGACAAAGGAGCCCCGTCCTCGTCCTGGAGCCAGCAGTGTCCCAGTTCCTTGGAGACTGCCACAGACAACTTGCCACATAGAGTCGGTGCGCCCCTGCCCCCAGCTCGGAGCGACAGTTATGCAGCCTTTCGCCACCGAGATCGGCCCAGCTCCTGGTCAACCCTTGATCAGAAACGATTCTGCCGTCCTGTAGCACACTCTTCAGGCTCCCTGAAGGCTCCCTTTATAGAGGAACAGTTGCACACTGTACTGGAGAGGAGTCCGGAGAACAGCCCCCCAGTGAAGCCCAAGCATAACTATTCCCAGAAGGCCCAGCCTGGCCAACCTCTGCTGCCCACTGGGATCTACCCTGTACCTTCCCTGGAGCCACACTTTGCCCAGGTGCCCCAGCCTTCTGTAAACAGTAATGGAACACTTTATCCTGCACTGGCCAAGGAGAGTGGATACACAGCCCCACAGGAAGTCTGCAGCAGGATGGCTGCCTTTGATGAAAATGGGAACCAGAACGGAGCTAGTAGGCCTGGATTTGCCTTCTACCAGCCCCTAGAACACGACTCACAGTCCCCAGTGGAGAGGAAACCAGAAACTACAGCCAAGTATGTCCCTTACAAAGTCCATTTTTCTTCAGTGCCTGAAAATGAGGATTCCTCCCAGAACAACCATCTCACACTTCCCCAAGGCAGCAGCCCACATCCCAGTGACAAGAAGAGTGCTCCTAGCAACAAACTGTGTGCTAATCACCATGGCCTCAAATCCTCTCAGGCTCAGGCCTGGCAGGTAGGTGAAGACAAGAGACCTTCCCGGCCTTTGGAGCCCTGGGACTGTGATTTCCAGGAAGACCACAATGCTAACCTCTGGCAAAAGCTGGAGAAAGAAGGCAACTTTGGCAGGACCAGGTCAGCCTTCTCATCTCTTCAGAACATTCCAGAGAGCTTTAGAAGGCAAAGTAGCCTGGAGCTAGGAGGGGGAGCCCAGGTGGGTTCCCCCAGTGGTAGGCCCACCTGTGTAATCAACACCAAGGTAGAAGGTCCAGAGAGGAAAGGTGACCACAGGGGCCATTCGGACAGGCCAGTTTCCTACACACGGCCTGATGGGAGAGCCAGCGCCATGACCTCTGTGCATAGCTCAGAACTCAGGTGTGAAGAGCTGCCCAGCCCAGTGCAGACCTCTGGGCCGGCCGTGAGGAGACTGAGTTCGGGCAGCGCCTCTGCCCTGCAGGCCTTTCCATATGGGCAGTCCCGCTCCTCAGTGCTGGAGAAGGTTTCCAGGATCGAGCAGCGAGAGCGCGGGGGTCACAGACCCCCGAGTGCAGGAGGCCCTGCTCTTGGCTATCACTATAGGCCCACTGGAAAGGCCCCGACTTCAGGTGCTCCGGGGAATGACTTCCAAGAGACTGAAGCTAAGCCTAGTGTCCACTTCCCTGAGCCCCGCGGTGATGGCGAGGGCGATGACAGAGAGCCTGAGTGTGAGGCGGCGGCCCGGCAGCCCAGTGCCTCATGGCGGAGAGGGCCCATCGAGCCCATGGCCCCACGGAGGGACGCCCGCCTGCCTCGCAGCCAGAGCGCCCTACAGCTGCTGGGCTCCGGCACACCTGAGCCCCCCTGCAGCCGCGCTTACAGGGACAGCCTCAAAGACGCGCAGTCCCGCGTGCTGGGTGCCACCTCCTTCCGCCGCCGCGACCTGGGGCCCAGCACACCTGCGCCCAGGAGGCCTGCATCGGCTCACGAGGGGCTGCGGGGTGCGGGGGCCTGGGCGTCCCCACACAGCCCCCGGGAGCGGCGGAGCGCGGGCCCAGCCAAGGGTGTCGCGGGCCCGGCAGAGTGTGTCCCAGCCGAGATCGTGCCCACCGAGGGCGTCCTGGCCAGGCCCACGCCCGCTGCCCGCCGAGGCCCACGCCGCCGCCTAGCGCCCGAGCAGAAGGCGCGCTCCTACTCAGAGCCAGGGCGCATGCATGAGGTGGGTGTCATGGCAGGTGAGGCCGGAGCGCGCCCTGTGCGCGGCCCTTCTGGCCTGGAGTTGAAAAGGCTGCAGCAGAGTGCCCTGGCTGACTATGTGTGGCGCAAGACCCATCTGCGCCCGGGGGCCCCTGCTGGCAGCGGCCCAGCAGAGCCCCCCATGGGGGCTCCCCGAGATCGCAGCAGCTCCTTCGCATGTGGGCGCCTGCGAACGGATCTTCAGGCTCCCTGGGCCCCAAGGGTGCTGCTCGGTTCAGCTGCAGCGTTCAGTGGGCCAAGAAATACCCTAAATGGGGACCACACCCTCGGAGGGCCACCCTCCCGGGGGGCCGCAACAACAAAGTCTGCATCAGCCGAGGACCTACTGGAGCGCTCGGAAGTCCAGGCGGTACCTGTCCACGTGAGGTCCAGGTCCTCACCCACCGCAGACAAGAGGCACCAGGGTGTTCTCCTGGGGGAAGATGGTGGCTTTGGTCTTGTGAGGGACCCATGTTACTTGGCTGGCCCTGGATCCAGGTCACTCAGTTGTTTAGAAAGAGACCAAGAGGAGATGCCCTTGCTCAGCCACCGTCCTGCCCCTCATTGGAGTGGCTCAGGCTGCAAAGCACCCTGTGGTTCCTCAGTTCCAAGTGACTGTCCTGAGGTCTCAGACCATCAGAGGCAAGCCAGCAGAACACCGGGCCCCAGGCCACTGCTGCCCAGAGTGCAGGGGCAATTTCCAGAGGCCAGGGCTCTACCTCTGACCCCACTCAGCTCCCCTCTGCCTTCTCCTGTTCCCTCTAGCTACTGTGTGCAACTTACCTCGGATCAGCAGACTGGGAGGGACAATCAGGCAGGGCAACAGCCTCTGCCCTCCTACACCCATGCAGGAACCCAGAGAAGCAACTCACACCCCCTGACCCAGCCATCCAGCCCAAGTGGCTGTGAGTTCAGCAGCCCAGAGCCAGGGGGAGGAGAAAGAACATGGAAGAGGGTCTCCCTGCCTCGGCAGCCTCCTCCTCCTTGGGCAAAGTGGGCCCATGAGGCCCACGAGGACAGCCTTCCCGAGGAAGCCTCATCACCTGAGTCCACAAACCCAAAGCACTGTAGAAAGCATCTGAGCCTTCCTAGTTCACGCAGCACTCCAGACCCAGGCCCTCTGGGGAGAATCTCCCTGCGAATATCTGAGTCAGGCCTGCCAGCCTCCGAAGTGCCTCAGGAGGAGTACGAGGACGAAGTGTTTGAGAAGGACTTGAATCCCAAGGCTACTTCCAGCCCTGAGTTTGAAGCTCTTCCTCCACCCCCACCTCCACTGAGCCAGGAAACCCCAGTGACCAGCTCAGATGATTTTCCTCCACCTCCTCCCCAAGCTGAGTGTGAAGGGCTGCTGGCCCTGGAGGCTCCTGAGGGGCCAGGCCACAGCTCTGGCCAATTTTCCAAGGTGACACTTGCAAGGGAAAGACACACACCTGCTGCAGCCCATCAGCTAGGAGGTCAGCCACCACCTTCCAGACCCCAGACTTCTGTCAAATGTTCAGAGGCCAATGAGTCCAGTGCACCCTTCTTCAAGAGCGTTCAGCCCCAACTGGCAGGGTGTCCTGGCGAGCAGCCAAGCCCAGGGCCACCCCTTCCCAGTCAGACCCAAAGCCTTATCCATGAGCCATCTGGTGGAACTCAGGGTTTGGAGAAGAAAGTCAGTTCTGATCCTCAGAAAACCTCTGAAGATATCAGAACAGAGGCTCTGGCCAAGGAAATTGTACACCAAGACAAATCTCTGGCAGACATTTTGGATCCAGACTCTAGAATGAAGACAACTATGGACCTGATGGAAGGTTTGTTTCCCCGAGATCTTAACTTACTGAAGGAAGACAGCACCAAGAGGAAGGCCATGCAGAAGACTGTCAGCCTCCTGGGATGTGAAGGCAAGAGGAGTGAAGACAAGGAAGTGGCCGGCATGTTGGTCAACTGCCCTGCCTACTACAGTGTGTCTGCTGCCAAGGCTGAGCTCCTGAACAAAATCAAAGAAATGCCAGAAGAGGTGAACGAGGAAGAGGAGCAGGTGGATGTCAATGAAAAAAAGGCTGAGCTCATAGAAAGCCTCACCCGCAAGCTCGAGACCCTCCAGGAGGCAAAGGGGAGTCTGTTCATGGACATCAAGCTTAACAATGCCTTGGGAGAGGAGGTGGAAGCTCTGATCAGTGAGCTCTGCAAGCCCCACGAGTTTGACAAGTACAAGATGTTCATAGGCGACCTGGACAAGGTGGTGAACCTGCTGCTATCCCTCTCGGGGCGCCTGGCCCGAGTTGAGAATGTCCTTAGTGGCCTTGGCGAAGACGCTAGTAATGAAGAAAGGAGCTCTCTGAATGAGAAGAGGAAGATCCTGGCTGGACAGCATGAGGATGCCCGAGAGCTCAAGGAGAACCTGGATCGGAGGGAGCGGGTGGTGCTAGACATCCTGGCCAATTACCTCTCAGAAGAACAACTCCAGGATTACCAGCATTTTGTGAAAATGAAGTCAACGCTCCTCATCGAGCAGCGAAAGCTGGATGACAAGATAAAGCTGGGGCAGGAGCAGGTCAAGTGTCTGCTGGAAAGCCTTCCCTCTGACTTCACTCCCAAGGTCCGGGCTTTTACTCTGCCCGCAGACCTCCCAGACCAGACGACACCTCTTGGCAGATGTACTTTCAGTGGTGTTTTTTCAACAATAACCTCTCCACTTTAA

Related Sequences

XP_004848087.1 Protein

Shroom3 PREDICTED: protein Shroom3 isoform X1 [Heterocephalus glaber]

Length: 1728 aa      
>XP_004848087.1
MMRISQGTVGPPWHQSYHSSSSTSDFSSYDHAYLRRSPDRCSSQGSMESLEPSGGYPPCRLLSPAKSTSSIDQLSHLHNKRDSAYSSFSTSSSILEYPPPGISGRERSGSMDTITARGGLLEGMRQADIRYVKTVYDPRRGVSAEYEVNSSAALLQGRESQASADGQAYDKWQNIPRDKGAPSSSWSQQCPSSLETATDNLPHRVGAPLPPARSDSYAAFRHRDRPSSWSTLDQKRFCRPVAHSSGSLKAPFIEEQLHTVLERSPENSPPVKPKHNYSQKAQPGQPLLPTGIYPVPSLEPHFAQVPQPSVNSNGTLYPALAKESGYTAPQEVCSRMAAFDENGNQNGASRPGFAFYQPLEHDSQSPVERKPETTAKYVPYKVHFSSVPENEDSSQNNHLTLPQGSSPHPSDKKSAPSNKLCANHHGLKSSQAQAWQVGEDKRPSRPLEPWDCDFQEDHNANLWQKLEKEGNFGRTRSAFSSLQNIPESFRRQSSLELGGGAQVGSPSGRPTCVINTKVEGPERKGDHRGHSDRPVSYTRPDGRASAMTSVHSSELRCEELPSPVQTSGPAVRRLSSGSASALQAFPYGQSRSSVLEKVSRIEQRERGGHRPPSAGGPALGYHYRPTGKAPTSGAPGNDFQETEAKPSVHFPEPRGDGEGDDREPECEAAARQPSASWRRGPIEPMAPRRDARLPRSQSALQLLGSGTPEPPCSRAYRDSLKDAQSRVLGATSFRRRDLGPSTPAPRRPASAHEGLRGAGAWASPHSPRERRSAGPAKGVAGPAECVPAEIVPTEGVLARPTPAARRGPRRRLAPEQKARSYSEPGRMHEVGVMAGEAGARPVRGPSGLELKRLQQSALADYVWRKTHLRPGAPAGSGPAEPPMGAPRDRSSSFACGRLRTDLQAPWAPRVLLGSAAAFSGPRNTLNGDHTLGGPPSRGAATTKSASAEDLLERSEVQAVPVHVRSRSSPTADKRHQGVLLGEDGGFGLVRDPCYLAGPGSRSLSCLERDQEEMPLLSHRPAPHWSGSGCKAPCGSSVPSDCPEVSDHQRQASRTPGPRPLLPRVQGQFPEARALPLTPLSSPLPSPVPSSYCVQLTSDQQTGRDNQAGQQPLPSYTHAGTQRSNSHPLTQPSSPSGCEFSSPEPGGGERTWKRVSLPRQPPPPWAKWAHEAHEDSLPEEASSPESTNPKHCRKHLSLPSSRSTPDPGPLGRISLRISESGLPASEVPQEEYEDEVFEKDLNPKATSSPEFEALPPPPPPLSQETPVTSSDDFPPPPPQAECEGLLALEAPEGPGHSSGQFSKVTLARERHTPAAAHQLGGQPPPSRPQTSVKCSEANESSAPFFKSVQPQLAGCPGEQPSPGPPLPSQTQSLIHEPSGGTQGLEKKVSSDPQKTSEDIRTEALAKEIVHQDKSLADILDPDSRMKTTMDLMEGLFPRDLNLLKEDSTKRKAMQKTVSLLGCEGKRSEDKEVAGMLVNCPAYYSVSAAKAELLNKIKEMPEEVNEEEEQVDVNEKKAELIESLTRKLETLQEAKGSLFMDIKLNNALGEEVEALISELCKPHEFDKYKMFIGDLDKVVNLLLSLSGRLARVENVLSGLGEDASNEERSSLNEKRKILAGQHEDARELKENLDRRERVVLDILANYLSEEQLQDYQHFVKMKSTLLIEQRKLDDKIKLGQEQVKCLLESLPSDFTPKVRAFTLPADLPDQTTPLGRCTFSGVFSTITSPL