Details from NCBI annotation

Gene Symbol Snx20
Gene Name sorting nexin 20, transcript variant X3
Entrez Gene ID 101709721

Database interlinks

Part of NW_004624757.1 (Scaffold)

For more information consult the page for NW_004624757.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNX20 ENSCPOG00000002662 (Guinea pig)

Gene Details

sorting nexin 20

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002418, Guinea pig)

Protein Percentage 89.78%
CDS Percentage 90.31%
Ka/Ks Ratio 0.10801 (Ka = 0.0498, Ks = 0.4608)

SNX20 ENSG00000167208 (Human)

Gene Details

sorting nexin 20

External Links

Gene Match (Ensembl Protein ID: ENSP00000332062, Human)

Protein Percentage 77.53%
CDS Percentage 82.91%
Ka/Ks Ratio 0.12909 (Ka = 0.1099, Ks = 0.8513)

Snx20 ENSMUSG00000031662 (Mouse)

Gene Details

sorting nexin 20

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034087, Mouse)

Protein Percentage 75.08%
CDS Percentage 80.83%
Ka/Ks Ratio 0.128 (Ka = 0.1305, Ks = 1.0197)

Snx20 ENSRNOG00000014202 (Rat)

Gene Details

sorting nexin 20 (Snx20), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019130, Rat)

Protein Percentage 76.04%
CDS Percentage 80.72%
Ka/Ks Ratio 0.12683 (Ka = 0.1313, Ks = 1.0356)

Genome Location

Sequence Coding sequence

Length: 951 bp    Location: 6014007..6019378   Strand: +
>XM_004847944.1
ATGGCAAGTGCTGAGCACCCTGGGAGCCCTGGCTGGACGGGATCCATGACCCAGGGCATGGCGAGGACCAAGCAGGAAGCACCTACCACTGGCCCAGACCTCCCACGTCCAGAACCTGAAGGATACCTAGGTGGCCCCAGTGGCCAAAGCTCCAACTCCAGCATGACCACACGGGAGCTGCAGGAGTACTGGCGGAGTGAGAAGGGCCACTGGAAGCCCGTCAAGCTGCTCTTCGAGATCGCCTCGGCCCGCATCGAGCAGAGAAGGGTCTCCAAGTTTGTGATGTATCAGATCGTGGTCATCCAGACAGGCAGCTTCGACAGCAACAAAGCTGTGCTGGAACGGCGCTACTCGGACTTCGAGAAGCTGCAGAAAAGCCTGCTGAAGTCCTACCGGGAGGAGATCGAGGACGTGGTCTTCCCCGGGAAGCGCCTGACGGGGAACTTCTCGGAAGAAATGATTGGCGAGCGCAGGCTGGCGCTCAGGGAGTACCTGCGCCTGCTCTACGCCATCCGCGCCGTGCGCCGCTCGCGTGAGCTCCTGGACTTCCTCACACGGCCGGAGCTGCGCGAGGCCTTCGGCTGCCTGCGCGCCGGGCAGTACGCGCGCGCCCTGGACACGCTGCTACGCGTGGTGCCGCTGCTGGAGCGCCTCACGGTGCACTGCCCCGCCGCCCCGGTGCCCGCGCTCTGCGCAGTCTTTGTGTGCTACCGCGACCTGGAGCGCCCCGCCGAGGCCTTCGCGGCCGGCGAGAGGGCCCTGCGGTGCCTGCAGGCCCGGGAGAGCCACCGCTACTACGTCCCTCTGCTGGAAGCCATGGTGCGCCTGGCCTACTCGCTAGGCAAGGACTTCGCGTCGCTGCAGGGGAGGCTGGAGGAGAGCCAGCTCCACAGGCCCAGCCACCGTGGCTTCTCCCTCAAGGAGCTCAGTGTGCGAGAGTACCTGTCCTGA

Related Sequences

XP_004848001.1 Protein

Snx20 PREDICTED: sorting nexin-20 isoform X3 [Heterocephalus glaber]

Length: 316 aa      View alignments
>XP_004848001.1
MASAEHPGSPGWTGSMTQGMARTKQEAPTTGPDLPRPEPEGYLGGPSGQSSNSSMTTRELQEYWRSEKGHWKPVKLLFEIASARIEQRRVSKFVMYQIVVIQTGSFDSNKAVLERRYSDFEKLQKSLLKSYREEIEDVVFPGKRLTGNFSEEMIGERRLALREYLRLLYAIRAVRRSRELLDFLTRPELREAFGCLRAGQYARALDTLLRVVPLLERLTVHCPAAPVPALCAVFVCYRDLERPAEAFAAGERALRCLQARESHRYYVPLLEAMVRLAYSLGKDFASLQGRLEESQLHRPSHRGFSLKELSVREYLS