Details from NCBI annotation

Gene Symbol Ssr1
Gene Name signal sequence receptor, alpha, transcript variant X1
Entrez Gene ID 101711029

Database interlinks

Part of NW_004624756.1 (Scaffold)

For more information consult the page for NW_004624756.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SSR1 ENSCPOG00000014853 (Guinea pig)

Gene Details

signal sequence receptor, alpha

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013383, Guinea pig)

Protein Percentage 95.53%
CDS Percentage 90.84%
Ka/Ks Ratio 0.07695 (Ka = 0.0263, Ks = 0.3415)

SSR1 ENSG00000124783 (Human)

Gene Details

signal sequence receptor, alpha

External Links

Gene Match (Ensembl Protein ID: ENSP00000244763, Human)

Protein Percentage 95.45%
CDS Percentage 90.68%
Ka/Ks Ratio 0.0596 (Ka = 0.0228, Ks = 0.3831)

Ssr1 ENSMUSG00000021427 (Mouse)

Gene Details

signal sequence receptor, alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021864, Mouse)

Protein Percentage 93.71%
CDS Percentage 89.16%
Ka/Ks Ratio 0.07172 (Ka = 0.0314, Ks = 0.4382)

Ssr1 ENSRNOG00000014165 (Rat)

Gene Details

signal sequence receptor, alpha (Ssr1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019040, Rat)

Protein Percentage 94.41%
CDS Percentage 87.06%
Ka/Ks Ratio 0.04924 (Ka = 0.029, Ks = 0.5883)

Genome Location

Sequence Coding sequence

Length: 876 bp    Location: 18229630..18247902   Strand: +
>XM_004847730.1
ATGAGGCTCCTCCCCCGCTTGCTTCTGCTTCTATTGTTCGTGTTCCCTGCCACCGTCTTGTTCCGCGGAGGCCCCGGAGGCTCATTTGCTGTGGCTCAAGATCTTACAGAGGATGAAGAAACAGTGGAAGATTCAATAATTGAAGATGAAGATGAGGAAGCCGAGGTAGAAGAAGATGAACCCACAGATTTGGCAGAAGATAAAGAGGAAGAAGATGTATCTGGTGAACCTGAAGCTTCACCAAGTGCAGATACAACTATCCTGTTTGTAAAAGGAGAAGATTTTCCAGCAAATAATATTGTGAAGTTCCTGGTAGGCTTTACAAACAAGGGTACAGAAGATTTTATCGTTGAGTCCCTAGATGCCTCTTTCCGCTATCCTCAGGACTACCAGTTCTACATCCAGAATTTCACAGCTCTTCCTCTGAACACTCTCGTGGCACCCCAGAGACAGGCAACGTTTGAGTACTCCTTCATCCCTGCAGAGCCCATGGGCGGACGGCCCTTCGGTCTGGTCATCAATCTGAACTACAAGGATCTAAACGGCAATGTATTCCAGGATGCTGTCTTCAATCAAACCGTTACAGTTATTGAAAGAGAGGATGGGTTAGATGGAGAAACAATCTTTATGTATATGTTCCTTGCTGGTCTTGGGCTTCTGCTCGTCGTTGGCCTTCATCAGCTCCTGGAATCGAGAAAGCGCAAGAGGCCCATTCAGAAGGTGGAGATGGGTACATCGAGTCAGAATGACGTTGACATGAGTTGGATCCCTCAGGAGACTTTGAATCAGATCATGCAGAGTAGAAGAGACAAAGCTTCTCCGAGAAGGCTGCCCCGGAAGCGGGTGCAGAAGCGGTCTGCGGGATCCGATGAGTAA

Related Sequences

XP_004847787.1 Protein

Ssr1 PREDICTED: translocon-associated protein subunit alpha isoform X1 [Heterocephalus glaber]

Length: 291 aa      View alignments
>XP_004847787.1
MRLLPRLLLLLLFVFPATVLFRGGPGGSFAVAQDLTEDEETVEDSIIEDEDEEAEVEEDEPTDLAEDKEEEDVSGEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTLVAPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLLVVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQIMQSRRDKASPRRLPRKRVQKRSAGSDE