Details from NCBI annotation

Gene Symbol Snrnp48
Gene Name small nuclear ribonucleoprotein 48kDa (U11/U12)
Entrez Gene ID 101707817

Database interlinks

Part of NW_004624756.1 (Scaffold)

For more information consult the page for NW_004624756.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNRNP48 ENSCPOG00000007910 (Guinea pig)

Gene Details

small nuclear ribonucleoprotein 48kDa (U11/U12)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007121, Guinea pig)

Protein Percentage 94.1%
CDS Percentage 92.43%
Ka/Ks Ratio 0.09277 (Ka = 0.0276, Ks = 0.2974)

SNRNP48 ENSG00000168566 (Human)

Gene Details

small nuclear ribonucleoprotein 48kDa (U11/U12)

External Links

Gene Match (Ensembl Protein ID: ENSP00000339834, Human)

Protein Percentage 91.45%
CDS Percentage 89.58%
Ka/Ks Ratio 0.10073 (Ka = 0.0439, Ks = 0.4362)

Snrnp48 ENSMUSG00000021431 (Mouse)

Gene Details

small nuclear ribonucleoprotein 48 (U11/U12)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000089230, Mouse)

Protein Percentage 86.35%
CDS Percentage 86.94%
Ka/Ks Ratio 0.14921 (Ka = 0.0715, Ks = 0.4792)

Snrnp48 ENSRNOG00000013756 (Rat)

Gene Details

small nuclear ribonucleoprotein 48 (U11/U12) (Snrnp48), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018508, Rat)

Protein Percentage 87.24%
CDS Percentage 86.35%
Ka/Ks Ratio 0.11978 (Ka = 0.0677, Ks = 0.5649)

Genome Location

Sequence Coding sequence

Length: 1020 bp    Location: 18032759..18018448   Strand: -
>XM_004847721.1
ATGGAGGACGAGCCACCTCCGGTGGAGGAGCGGCGGCGGCTGCAGGAGGAGCTGAGCGAGTTCGTGGAGGGCTGCTACCGGACGCTGGGGGAGGTGACGGCGTCCCTGGGCTGGAGTCTGGATCAGCTGGACCCTGGGGAGGAGGAGGCGGCCAAGGGTGAAGTTGTGATATGTCCTTATGATTCTAATCATCACATGCCCAAATCATCTTTATTAAAGCACATGGAATCCTGCAGATTGAGGAAAATGGGCTATACTAAAGAAGAAGAGGATGAAATATATAATCCTGATTTTTTCTATGAGAATGCCAAGGTACCTTCAATTACTTTGAATAAGGAGTCACAATTCCATATCATTAATCAAGCTAGAACCACAGTTGGAAAAGATGGTGATTGTTACAATCAAAGAGTGTATTCTTCATTGCCTGTTGAAGTTCCTCTGAATCACAAACGGTTTGTTTGTGATCTGACCCAAGCAGATCGTCTTGCCCTTTATGATTTTGTTGTTGAGGAAACAAAGAAAAAGCGCTCTGATTCTCAAATCATTGAAAACGACAGTGATCTCTTTGTAGACTTGGCTGCCAAAGTCAATCAAGATAATAGTCGGAAAAGTCCAAAGTCTTACCTTGAAATTCTGGCAGAAGTTAGAGATTATAAAAGAAGACGCCAGTCCTATAGAGCTAAGAATGTTCATATAACCAAGAAATCATATACTGAGGTGATTCGGGATGTCATAAATGTGCACATGGAAGAACTCAGTAACCACTGGCAAGAAGAGCAGGAAAAGGCAGAGGGCAATGCTGAAAAGAATGAAGAAAGGCGCTCAGCCTCAGTGGATTCACGGCAGTCTGGTGGGAGCTATCTGGATGCTGACAGTTCACGCCATAGAAGGGATCGGAGCAGGAGCCCACATAAACGGAAAAGAAATAAAGATAAGGATAAAAACTCTGAGTCGAGAAGGAGAAAAGAGAGGGATGGGGAAAGACATCACAGTCATAAAAGAAGAAAGCAAAAAACATAA

Related Sequences

XP_004847778.1 Protein

Snrnp48 PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Heterocephalus glaber]

Length: 339 aa      View alignments
>XP_004847778.1
MEDEPPPVEERRRLQEELSEFVEGCYRTLGEVTASLGWSLDQLDPGEEEAAKGEVVICPYDSNHHMPKSSLLKHMESCRLRKMGYTKEEEDEIYNPDFFYENAKVPSITLNKESQFHIINQARTTVGKDGDCYNQRVYSSLPVEVPLNHKRFVCDLTQADRLALYDFVVEETKKKRSDSQIIENDSDLFVDLAAKVNQDNSRKSPKSYLEILAEVRDYKRRRQSYRAKNVHITKKSYTEVIRDVINVHMEELSNHWQEEQEKAEGNAEKNEERRSASVDSRQSGGSYLDADSSRHRRDRSRSPHKRKRNKDKDKNSESRRRKERDGERHHSHKRRKQKT