Details from NCBI annotation

Gene Symbol Atxn1
Gene Name ataxin 1, transcript variant X7
Entrez Gene ID 101710194

Database interlinks

Part of NW_004624756.1 (Scaffold)

For more information consult the page for NW_004624756.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCA1 ENSCPOG00000022869 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018940, Guinea pig)

Protein Percentage 92.88%
CDS Percentage 91.74%
Ka/Ks Ratio 0.08036 (Ka = 0.031, Ks = 0.386)

ATXN1 ENSG00000124788 (Human)

Gene Details

ataxin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000244769, Human)

Protein Percentage 89.58%
CDS Percentage 88.06%
Ka/Ks Ratio 0.08402 (Ka = 0.0483, Ks = 0.5752)

Atxn1 ENSMUSG00000046876 (Mouse)

Gene Details

ataxin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000137439, Mouse)

Protein Percentage 88.17%
CDS Percentage 84.82%
Ka/Ks Ratio 0.07719 (Ka = 0.0604, Ks = 0.7822)

Atxn1 ENSRNOG00000016998 (Rat)

Gene Details

ataxin 1 (Atxn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023140, Rat)

Protein Percentage 88.66%
CDS Percentage 84.71%
Ka/Ks Ratio 0.06873 (Ka = 0.0573, Ks = 0.8335)

Genome Location

Sequence Coding sequence

Length: 2364 bp    Location: 9772622..10167560   Strand: +
>XM_004847649.1
ATGAAATCCAACCAAGAGCGGAGCAACGAATGCCTGCCGCCCAAGAAGCGCGAGATCCCCGCCACCAGCCGGCCCTCTGAGGAGAAGGCCACCGCCCTGCCCAGCGACAACCACCGGGCAGAGAGCGTGGCATGGCTCCCCGGCAACCCGGGCGGCCGCAGCCACGGGGGCGGGCGGCACGGGCCAGCGGGGACTTCGGTGGAGCTTGGTTTACAGCAGGGAATAGGTTTACACAAATCACTCTCCACGGGCCTGGACTACTCACCGCCCAGCGCTCCCAGGTCGGTGCCCGCGGCCGCCACGCTGCCCACGGCGTATCCTCCCCCGCAGTCGGGGACCCCAGTGTCCCCCGTGCAGTACGCTCACCTGCCGCACACCTTCCAGTTCATTGGGTCCTCCCAGTACAGTGGACCCTATGCCGGCTTCATCCCTTCGCAGCTGATCTCGCCCTCGGCCAACCCGGTCACCAGTTCGGTGGCCTCCCCTGCAGGGGCCACCACTCCGTCCCAGCGCTCCCAGCTGGAGGCCTATTCCACGCTGCTGGCCAACATGGGCGGCCTGAGCCAGGCGCCGGGACCCAAGGGTGAGCCGCAGCCACCGCACCTGGGCCGCGCCCCCGGCCTCATCGCCCCGGGGTCCCCGCCTGCCGGCCAGCAGAGCCAGTACATCCACATCTCCAGCTCCCCACAGAGCTCCGGCCGCCCGGCCTCCCCCCCGGCCGTCCCGGTCCACCTCCACCCCCATCAGACGATGATGCCGCACACGCTCACCCTCGGGCCCTCGTCCCAGGTGGTCGTGCAGTACACCGACTCCGGGGGCCACTTCGTCCCTCGGGAGCCCGCCAAGAAAGCCGAGAGCGGCCGGCTGCAGCAGGCCAAGGAGGTGCTGAACGGGGAGCTGGAGAAGAGCCGTCGCTACGGGGCTCCGTCCCCGGCCGAGCTGGGGCTGGGCAAGGCGAGCGGCAAGGCGGTGCCTCACCCCTACGAGCCCAGGCACATGGTGGTCCACCCGAGCCCCGCGGACTACAGCGGCCGGGAGGCCTCGGGGGTGCGGGCCTCTGTGATGGTCCTGCCCAACAGCTCCACGCCCACGGCCGACCTGGAGGTGCAGCAGGCCACGCACCGCGAGGCCTCACCGTCCACGCTCAACGACAAAGGCGGCCTGCACTTGGGAAAGCCGGGCCACAGGTCCTACGCCCTGTCACCCCACACGGTCATCCAGACCTCACACAGTGCTTCGGAGCCTCTGCCGGTGGGACTGCCCACCACGGCCTTCTACGCAGGCACACAGCCCCCCGTCATCGGCTACCTGAGCGGCCAGCAGCAAGCGATCACCTATGCCGGCAGCCTGCCGCAGCACCTGGTCATCCCGGGCACCCAGCCCCTGCTCATCCCGGTGGGTGGCACTGACATGGAGGCGTCGGGGGCCGCCTCTGCCATTGTCACGTCGTCGCCCCACTTCGCTGCAGTGCCTCACACCTTTGTCACCACCGCCCTGCCCAAGACTGAGAACTTCACCCCCGAGGCTCTGGTCACCCCAGCTGCCTACCCAACCATGGTCCAGGCCCAGATCCACCTGCCCGTGGTCCAGTCGGTGGCCTCCCCCGCGGCGGCGCCCCCAACCCTGCCGCCCTACTTCATGAAAGGCTCCATCATCCAGTTGGCCAACGGGGAGCTGAAGAAGGTGGAGGACTTGAAGACGGAAGACTTCATCCAGAGTGCGGAGATCAGCAATGACCTCAAAATCGACTCCAGCACCGTGGAGAGGATCGAAGACAGCCACAGCCCGGGCGTTGCGGTCATACAGTTCGCTGTTGGGGAGCACCGAGCACAGGTCAGCGTTGAAGTTCTGGTAGAGTATCCCTTTTTTGTGTTTGGACAGGGCTGGTCATCCTGCTGTCCAGAGAGAACCAGCCAGCTCTTCGATTTGCCGTGTTCTAAACTCTCGGTTGGGGACGTCTGCATCTCGCTGACCCTCAGGAACCCGAAGAACGGCTCTGTTAAAAAGGGCCAGCCCGTGGATCCGGCCAGCGTCCTGCTGAAGCACTCGAAGCCCGACAGCCTGACAAGCAGCAGACACAGGTACACCGAGCAGGAGAACGGAATCGGTCAGGGAAGCGCCCACATGCTCTCTGAGAACGGCGAACTGAAGTTTCCGGAGAAAATAGGATTGCCTGCAGCGGCCTTCCTCCCCAAAATAGAACCCAGCAAGCCTGCGGCCCCGAGGAAGAGGAGGTGGTCGGCCCCGGAGACCCGCAAACTGGAGAAGTCGGAAGATGAGCCGCCTTTGACTCTGCCCAAGCCTTCCCTAATTCCTCAGGAGGTGAAGATCTGCATCGAAGGCCGGTCTAACGTGGGCAAGTAA

Related Sequences

XP_004847706.1 Protein

Atxn1 PREDICTED: ataxin-1 isoform X7 [Heterocephalus glaber]

Length: 787 aa      View alignments
>XP_004847706.1
MKSNQERSNECLPPKKREIPATSRPSEEKATALPSDNHRAESVAWLPGNPGGRSHGGGRHGPAGTSVELGLQQGIGLHKSLSTGLDYSPPSAPRSVPAAATLPTAYPPPQSGTPVSPVQYAHLPHTFQFIGSSQYSGPYAGFIPSQLISPSANPVTSSVASPAGATTPSQRSQLEAYSTLLANMGGLSQAPGPKGEPQPPHLGRAPGLIAPGSPPAGQQSQYIHISSSPQSSGRPASPPAVPVHLHPHQTMMPHTLTLGPSSQVVVQYTDSGGHFVPREPAKKAESGRLQQAKEVLNGELEKSRRYGAPSPAELGLGKASGKAVPHPYEPRHMVVHPSPADYSGREASGVRASVMVLPNSSTPTADLEVQQATHREASPSTLNDKGGLHLGKPGHRSYALSPHTVIQTSHSASEPLPVGLPTTAFYAGTQPPVIGYLSGQQQAITYAGSLPQHLVIPGTQPLLIPVGGTDMEASGAASAIVTSSPHFAAVPHTFVTTALPKTENFTPEALVTPAAYPTMVQAQIHLPVVQSVASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISLTLRNPKNGSVKKGQPVDPASVLLKHSKPDSLTSSRHRYTEQENGIGQGSAHMLSENGELKFPEKIGLPAAAFLPKIEPSKPAAPRKRRWSAPETRKLEKSEDEPPLTLPKPSLIPQEVKICIEGRSNVGK