Details from NCBI annotation

Gene Symbol Scgn
Gene Name secretagogin, EF-hand calcium binding protein
Entrez Gene ID 101716241

Database interlinks

Part of NW_004624756.1 (Scaffold)

For more information consult the page for NW_004624756.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCGN ENSCPOG00000005905 (Guinea pig)

Gene Details

secretagogin, EF-hand calcium binding protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005326, Guinea pig)

Protein Percentage 90.97%
CDS Percentage 92.54%
Ka/Ks Ratio 0.21778 (Ka = 0.0442, Ks = 0.2028)

SCGN ENSG00000079689 (Human)

Gene Details

secretagogin, EF-hand calcium binding protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000367197, Human)

Protein Percentage 87.32%
CDS Percentage 87.44%
Ka/Ks Ratio 0.1505 (Ka = 0.0659, Ks = 0.4382)

Scgn ENSMUSG00000021337 (Mouse)

Gene Details

secretagogin, EF-hand calcium binding protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021770, Mouse)

Protein Percentage 84.06%
CDS Percentage 82.61%
Ka/Ks Ratio 0.14759 (Ka = 0.1006, Ks = 0.6814)

Scgn ENSRNOG00000016628 (Rat)

Gene Details

secretagogin, EF-hand calcium binding protein (Scgn), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022329, Rat)

Protein Percentage 82.25%
CDS Percentage 82.0%
Ka/Ks Ratio 0.1674 (Ka = 0.1117, Ks = 0.6675)

Genome Location

Sequence Coding sequence

Length: 834 bp    Location: 1407885..1368434   Strand: -
>XM_004847585.1
ATGGACAGCACCCGCGGCCCGGCTCCGGGGCGGCGTCTTGACGCGGCGGGCTTCTGGCGGGTGTGGCAGCGCTTTGATGTGGACGAAAAAGGTTACATAGGAGAGAAGGAGCTAACTGCTTTCCTTCATCAAATGCTGATGAAACTGGGTACTGATGACTCAGTTATGGAGGAAAATGTGTGCAAGATGAAACAACAATTTATGACTGCCCATGGTGTCCCTAAAGAAGGTCACATAAGGATGAAAGAGCTGGCCAGAATGTTCTTGTCTGAGGATGAAAACTTTCTTCTCCTCTTTCGCTTGGAAGCCCCCTTGGACAGCAGTGTGGAGTTCATGCAGATTTGGCGCAGATACGATGCGGACAGCAGTGGCTTCATATCAGCTGCTGAGCTTCGAAACTTCCTCCGAGACCTTTTCTTCCACCACAAAAAGGCCATTTCAGAGGCAAAACTGGAAGAATACACAGACACCATGATGAAAATCTTTGACAAAAATAAAGATGGTCGGTTGGATCTCAATGACCTGGCAAGGATTCTGGCTCTTCAGGAAAACTTCCTTCTCCAATTTAAAATGGATGCCAGCTCTACTGAAGAAAGGAAGAGGGATTTTGAGAAAATCTTCGCCCACTATGACATTAGCAAAACTGGAGCCCTAGAAGGCCCAGAAGTGGACGGGTTTGTCAAAGACATGATGGAGCTGGTCCAGCCCAGCATCAGTGGAGTGGACCTTGACAAGTTCCGGGGGATCCTCCTGCGTCACTGCGATGTGAACAAGGATGGGAAAATTCAGAAGTCTGAGCTGGCTTTGTGTCTTGGGCTGAAAATCAACCCCTGA

Related Sequences

XP_004847642.1 Protein

Scgn PREDICTED: secretagogin [Heterocephalus glaber]

Length: 277 aa      View alignments
>XP_004847642.1
MDSTRGPAPGRRLDAAGFWRVWQRFDVDEKGYIGEKELTAFLHQMLMKLGTDDSVMEENVCKMKQQFMTAHGVPKEGHIRMKELARMFLSEDENFLLLFRLEAPLDSSVEFMQIWRRYDADSSGFISAAELRNFLRDLFFHHKKAISEAKLEEYTDTMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSTEERKRDFEKIFAHYDISKTGALEGPEVDGFVKDMMELVQPSISGVDLDKFRGILLRHCDVNKDGKIQKSELALCLGLKINP