Sequence details NCBI ID: XM_004847340.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Sh3tc1
Gene Name SH3 domain and tetratricopeptide repeats 1, transcript variant X1
Entrez Gene ID 101718548

Database interlinks

Part of NW_004624755.1 (Scaffold)

For more information consult the page for NW_004624755.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 4263 bp    Location: 23914569..23936894   Strand: +
Raw sequence   
>XM_004847340.1
ATGGCCGCTGTGGGGCACCCTGAGCACCCCGGTGCCTGCTGCGTGGGACGGCGTAGACGGAGGCTGAGTCCATCCTGCAGGAAGCACCCTTGGGTGCTGCTGATCTGGAAGGCAGGGCCGGGGCAGCAGCATGGTGACAACACGGGAGGAGGGACTGGGGACGGCCAGACAGGGGCCCTGCTCAGAGCCCGTGGCCCGGCCAGGTGGGGTGGAGCTGGGAACCTGAGGAGAAATGGGGCTCCCGGTGCCTATGGGGGCTGCGGTCACGGTCACAGGAGCTGCTCTGGGGCTGCTGGCTGCGGGGTGGAACCTGTGTGCCCTTCTCCTGTCCTCTCAGCAGCCAGTCTCCCCGGTGCTGTGGACCTTGCTGGGATTCGAACCCTGACCATGGGGCTCCCTGCAAGCCCAGCCCAGGCCTGCAGCTGGACCCGGGGAGCCCCACACTGCCCTGGCCAGGCTGACACACAGGCCCTCTGCCCTGCAGACCTGACCTTGCAGCTGCGGGCCGTGCACAGGAAGAGCGGGCGGCCAGACCCAGGCCTGCAGCAGGCTCTGCGTGGCCGTCTGCGCCTGCTGGAGAATGACAGCCTCGAGGTGGCCCGAGTGCTCGGGGAACTCTCTGCCAGGCTGCTGTCCATCCACAGCGACCAGGACCGGATCGTGGTGACGTTTAAGACCTTCGAGGAGATCTGGAAGTTTTCCACCTACCATGCCCTCGGTTTCACGCACCACTGCCTGGAGGCGCTGCTGGTGGACGCCACCTTCTGGCTGCTGGCGCCTGGCGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGCAGCCATCTGTGTGCAGGTGGCTGAGGACGCCCTGAGGCTGATGCAGGAGAGCCTCCTGGCCCAGGAAGGGCCCTTCTTCGTCCTGTGTCCTGACCACCGCGTGAGACTGACGCCGGGCGCCCAGGGCGCAGAGAAGGCGCAGCCCCACAGACCGGCTCCGGGGGGCTCCCTGGGAGAGGCGACCCCAGCAGCAGACTCCTCAGCCTCCGGCCCTGGCGCAGCCCCAGAGCAGCCCCTGGGTCCGTTCCACCAGTGGGCTCTGAGAGTTCCCTGGGACCCTGCCGAAGATTCTGTGGATGGACCTGGGCCACCCGACACGCTGCTGGTGGGGTGCGGCCGGGTCTCCGCAGTGGCCGACTGGCAGAGCTCAGGCCCTGAAGAGCTGTCCCTCCATACTGGTGACCTCCTGGAGCTGCTCAGTGCCCGGGTGCCTGGCCTGCCCTGGTGCGTGGCCCAGCACGTGGCCTCAGGCTGCGTGGGCTTCGTGCCCTCGAGTCTCATCTGCCTGCAGGACCCTGCATCTGAGTTGGAGGATGCTATCTTTCTGGACGAGGAGGAGCGGTCATTCTTCAGCAGCGAGGGACGCTTTTCTGAGGAGAACGCCCGGCAGCTGCTGGGCAGGATGTCCGGCAGGGACATGTGCACCACGTACAGCTTGGACAGGCTGGAGGAGGCCGAGCCCGAGCAGCCGGAGGAACACGCAGAGGCGCCGCCCCTTTGCCCATCCCCGGAACTGCAAGAGACCCTGCAGACAGTGAGGGGCGTCCTCCAACAGTGCAAGAGCTGCCCACACTGCCCCGAGGAGCCAGTGCCCTGGGGCCCCCCAGCAGCATCCAGCAGCTGGAGCTCACCAGACCCTGAGGAGCCCCCCTTCTGCCTGGATGCCAAGGACGGCTGGGCCGGCCCCGAGGCCCCGGGCTCCCTGCTGCAGCTCCTGAATGCACCGGTGTATGAGGCCGGCTTCCGCAGCCTGTATAATGACTCACTGTCGTGGCTGAGCAGCATGTCCAGCGGCCTGGCTGATGAGGAGGAGCTGGCTGACCGCCTGGCACAGGCCCGAGGGGCGGCCAAGAAGGCCGGCCTGGGCATGGCTCTGGCCAGACTCTGCTTCCTGCTGGGGCAGCTATGCGCCCGGAGGCTCAAGCTGTCCCAGGCCCGGGTGTACTATGAGGAAGCCCTGGGCGCCCTGGGGGGCTGCTTCAGGGACCTCTTCCTGGTGGTAGCTGTGCACACCCACCTGGCCAGCGTCTACCTGAAGCAGAAGAACAGGGACAAGTGTGCCCAGGCCATGTCCAGGGCTGCGGCCCTGCTCCTGGGGACGCCCGGCCAGGTGGGCAGCTCCGAGGCCAAGGCCGAGCTCCTGAGGTTTGCGCTGCGCCGGGCCATTGTGGCCCAGAGCCCACAGGCGGAGGCCCGGGCCTGCTTCCTGCTAGTCCAGCACCACACACGCCTCAGGCAGCCCGAGCAGACCCTGCCCTACCTGGAGCGGCTGCTGCTTCTGCACAAGGCCTTGGGGACCCTGCATGCTGCATGGCCCGCAGACTGCTACCTGCTGCTGGCAGACACCTACAGCTGGAAGTGTCTGCCCCACCTGGCCCTGAGCTGCATCAGGGCGGCCTCGCTGGGGACAAGGGGGTCGCTAGCCAGCTCCCTTCGGAGCGTGGACCTGGTCCTCCAGAGCGGCCCCCGGCTGCATGCCCAGACCAGGGCCCCCTGCCTCCCCGCACAGGTCGCCCACTACCTCAGACAGGCGCTGGCCTCCCTGGCCTCGGGCCCCGGGCAGGGGCTGCGTGGTGCCCTCTACGCCAGCCTGGCCCAGCTGTACAGCCACCATGGACAGCACGGCCAGGCCATCGCCTTCATGACACGGGCGGTAGAAGCCGACACCACAGCCGGGGCCCGCCCTGTGGTGGCCCACTTGACGGCCCTGGCCTGGCTGCACATGCTCCAGGGTCAGACCCTGGTGGCCCTGCACATCCTGGAGTCTGTCCTGGACTCGGCAGTGGCCAGTGAGGACCAGGAGGGAGTGGTGGCCAACATGGCGGCCATGGCCCTGAAACGGATGGGCAGGACCCAGCAGGCGGCCGAGGGCTACTACCGTGCCCTGCACACTGCCCGGCGCCTGGGCCAACGCCAGAACCAGGCGGTGGTCCTGGCCAACTTCGGGGCCCTGTGTATGCAGGCCGGCGCCGGCCGGCTGGCCCAGCACTACTTCCTGGAGGCCATCGGGGTCTTCTCGCTGCTGCCCAGCGGGGAGTGTGGCCGGGACTTCACACAGGTACTGCTGCGGACGGGACAGCTGTACACCTGCCGGGGCCTCGTGCAGCAGGGCAAGTGCTACTACCAGTGGGCGTTCCTGGTCGCCGTGGAGACGGACCACCTAGAGAGCCAGCTGTGCGCTGTCCAGCGGCTCTGCCATTTCTACAGCAGCGTGGCGCCCGACAAGGCACAGTCCGTCATCTACCTGGAGTTCCAGCTCACCCTGGCCCGGAAGGTGGCTGACAAGGTGCTGGAGGGGCAGCTCCTGGAGGCCATCAGCCGGCTCTACCTGTCGCTGGGCACTGAGCGGGCCTACAAATCTGCTCTGGACTACACCAAGCAGAGCCTGGGGATATTCATCGACCTGCAGAAGAAGGAGAAGGAGGCATATGCCTGGCTGCAGGCGGGGAAGATCTACTACATCCTACGCCAAAATGAGCTAGTGGACCTGTACATCCAGGTGGCACAGAACGCGGCCCTGTACACGGGGGACCCCAACCTGGGGCTGGAGCTGTTCGAGGCGGCTGGAGACATCTTCTTCAACGGGACCTGGGAGCGGGAGAAAGCGGTGTCCTTCTACCGTGACCGGGCACTGCCCCTGGCCGTGACCATGGGAAACCGGGAGGCGGAGCTGCGGCTGTGTAACAAGCTGGTGGCACTGCTGGCTGCGCTGGAGGCGCCCCAGGAGGGCCTGGAGTTCGCCCACGAGGCCCTGGAGCTCAGCATCACCCTGGGTGACCAGCTGAATGAGCGTGTGGCCTACCACCGGCTGGCCACCCTGCACCACCGACTGGGCCGCAGCGAGCTAGCCGAGCACTTCTACCTGAAGGCACTGTCGCTGTGTCGCTCGCCGCTGGAGTTCGAGGAGGAGACACTATACTATGTGAAGGTGTACCTGGTGCTGGGCGACATCATCTTCTACGAGCTGAAGGACCCCTTTGATGCGGCTGGGTACTACCAGCTGGCGCTAGCAGCAGCTGTGGACCTGGGCCACAAGAAGATGCAGCTGAAGCTCTGCACGCGGCTGGCCACCATCTACCACCACTTCCTGGTGGACCGCGAGATGTCGCTCTTCTTCTACCAGAAAGCCAGGACCTTCGCCTCGGAGCTCAAGGGCCGCAGGGCCGGCCTTGCCCCCCAACACCTCTGGGCCCGTGCCCCCTGGCTGGCCCCGGGGCCCCCACCTTGA

Related Sequences

XP_004847397.1 Protein

Sh3tc1 PREDICTED: SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1 [Heterocephalus glaber]

Length: 1420 aa      
>XP_004847397.1
MAAVGHPEHPGACCVGRRRRRLSPSCRKHPWVLLIWKAGPGQQHGDNTGGGTGDGQTGALLRARGPARWGGAGNLRRNGAPGAYGGCGHGHRSCSGAAGCGVEPVCPSPVLSAASLPGAVDLAGIRTLTMGLPASPAQACSWTRGAPHCPGQADTQALCPADLTLQLRAVHRKSGRPDPGLQQALRGRLRLLENDSLEVARVLGELSARLLSIHSDQDRIVVTFKTFEEIWKFSTYHALGFTHHCLEALLVDATFWLLAPGEEEEEEEEEEAAICVQVAEDALRLMQESLLAQEGPFFVLCPDHRVRLTPGAQGAEKAQPHRPAPGGSLGEATPAADSSASGPGAAPEQPLGPFHQWALRVPWDPAEDSVDGPGPPDTLLVGCGRVSAVADWQSSGPEELSLHTGDLLELLSARVPGLPWCVAQHVASGCVGFVPSSLICLQDPASELEDAIFLDEEERSFFSSEGRFSEENARQLLGRMSGRDMCTTYSLDRLEEAEPEQPEEHAEAPPLCPSPELQETLQTVRGVLQQCKSCPHCPEEPVPWGPPAASSSWSSPDPEEPPFCLDAKDGWAGPEAPGSLLQLLNAPVYEAGFRSLYNDSLSWLSSMSSGLADEEELADRLAQARGAAKKAGLGMALARLCFLLGQLCARRLKLSQARVYYEEALGALGGCFRDLFLVVAVHTHLASVYLKQKNRDKCAQAMSRAAALLLGTPGQVGSSEAKAELLRFALRRAIVAQSPQAEARACFLLVQHHTRLRQPEQTLPYLERLLLLHKALGTLHAAWPADCYLLLADTYSWKCLPHLALSCIRAASLGTRGSLASSLRSVDLVLQSGPRLHAQTRAPCLPAQVAHYLRQALASLASGPGQGLRGALYASLAQLYSHHGQHGQAIAFMTRAVEADTTAGARPVVAHLTALAWLHMLQGQTLVALHILESVLDSAVASEDQEGVVANMAAMALKRMGRTQQAAEGYYRALHTARRLGQRQNQAVVLANFGALCMQAGAGRLAQHYFLEAIGVFSLLPSGECGRDFTQVLLRTGQLYTCRGLVQQGKCYYQWAFLVAVETDHLESQLCAVQRLCHFYSSVAPDKAQSVIYLEFQLTLARKVADKVLEGQLLEAISRLYLSLGTERAYKSALDYTKQSLGIFIDLQKKEKEAYAWLQAGKIYYILRQNELVDLYIQVAQNAALYTGDPNLGLELFEAAGDIFFNGTWEREKAVSFYRDRALPLAVTMGNREAELRLCNKLVALLAALEAPQEGLEFAHEALELSITLGDQLNERVAYHRLATLHHRLGRSELAEHFYLKALSLCRSPLEFEEETLYYVKVYLVLGDIIFYELKDPFDAAGYYQLALAAAVDLGHKKMQLKLCTRLATIYHHFLVDREMSLFFYQKARTFASELKGRRAGLAPQHLWARAPWLAPGPPP