Details from NCBI annotation

Gene Symbol Afap1
Gene Name actin filament associated protein 1, transcript variant X2
Entrez Gene ID 101717414

Database interlinks

Part of NW_004624755.1 (Scaffold)

For more information consult the page for NW_004624755.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AFAP1 ENSCPOG00000023490 (Guinea pig)

Gene Details

actin filament associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018547, Guinea pig)

Protein Percentage 93.11%
CDS Percentage 89.76%
Ka/Ks Ratio 0.04005 (Ka = 0.03, Ks = 0.7502)

AFAP1 ENSG00000196526 (Human)

Gene Details

actin filament associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000410689, Human)

Protein Percentage 91.07%
CDS Percentage 83.47%
Ka/Ks Ratio 0.02859 (Ka = 0.0432, Ks = 1.5116)

Afap1 ENSMUSG00000029094 (Mouse)

Gene Details

actin filament associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000067779, Mouse)

Protein Percentage 90.8%
CDS Percentage 84.39%
Ka/Ks Ratio 0.03718 (Ka = 0.0446, Ks = 1.1988)

Afap1 ENSRNOG00000007599 (Rat)

Gene Details

actin filament associated protein 1 (Afap1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010346, Rat)

Protein Percentage 91.07%
CDS Percentage 83.75%
Ka/Ks Ratio 0.03242 (Ka = 0.0435, Ks = 1.3402)

Genome Location

Sequence Coding sequence

Length: 2187 bp    Location: 23769313..23663437   Strand: -
>XM_004847337.1
ATGGAAGAGTTAATAGTTGAACTACGCCTCTTTCTGGAGCTGCTGGACCACGAATACCTGACATCCACTGTCAGGGAGAAGAAGGCGGTGTTGACCAACATCCTCCTGCGGATCCAATCGTCCCGCGGCTTTGACGTGAAGGACCATGCTCAGAAGCCGGAGACCAACAGCCTGCCGGCGCCTCCGCAGATGCCTCTGCCGGAGATCCCGCAGCCCTGGCTGCCTCCTGACAGCGGGCCCCCGCCACTGCCGACGTCCTCCCTCCCGGAAGGCTACTACGAGGAAGCTGTGCCGCTGAGCCCCGGAAAGGCCCCGGAGTACATCACGGCCAATTATGACTCGGACGCCATGAGCAGCTCCTATGAGTCGTACGACGAGGAGGAGGAGGACGGGAAGGGGAAGAAGGCCCGGCACCAGTGGCCCTCGGAGGAGGCCTCCATGGACCTAGTGAAGGATGCCAAGATCTGTGCCTTCCTGCTGCGGAAGAAGCGCTTCGGCCAGTGGACCAAGCTGCTCTGCGTCATCAAGGACACCAAGCTGCTGTGCTACAAAAGTTCCAAGGACCAGCAGCCACAGATGGAGCTGCCGCTGCAGGGCTGTAGCATCATGTACATCCCGAAGGACAGCAAGAAGAAGAAGCACGAGTTGAAAATCACACAGCAAGGCACAGACCCACTGGTGCTGGCGGTGCAGAGCAAGGAGCAGGCGGAGCAGTGGCTGAAGGTGATCAAGGAGGCCTACAGCGGCTGCAGCGGCCCTTCAGAGCTGGAGTGCCCACCCCCGGCCAGCGCCCCGCTGCAGAAGGCGGAGCTGGAGAAGAAGCTGTCTTCAGAGAGACCCAGCTCGGACGGGGAGGGGGCCATGGAAAACGGAGTCTCGTGCAACGGGAAGGAGCAAGTGAAGAGGAAGAAGAGCTCCAAAGCAGAGGCCAAGGGGACGGTGCCTAAAGTCGCCGGGAAGAGGATCACCAAGATCATCGGGCTGGGGAAGAAGAAGCCGTCCACCGAGGAGCAGACCTCGTCCGCCGAGGAGGACGTGCCCACCTGTGGCTACCTGAACGTGCTCTCCAACAACCGCTGGCGGGAGCGCTGGTGCAGGGTAAAGGACAACAAGCTCATCTTCCACAAGGACAGGGCTGACCTGAAGACGCACATCGTCTCCATCCCACTCCGCGGCTGCGAGGTCATCCCGGGCCTGGATTCCAAGCACCCCCTGACCTTCCGGCTGCTCCGAAATGGACAGGAGGTGGCCGTGCTCGAGGCCTCCTCTTCAGAAGACATGGGCAGGTGGATCGGGATCCTGCTGGCAGAGACGGGGTCGTCCACAGACCCGGGCGCCCTGCACTACGACTACATAGATGTGGAGATGTCGGCCAACGTCATCCAGACCGCCAAGCAGACCTTCTGCTTCATGAACCGACGCGGGTTGTCCACCAGCCCCTACCTGGGGAGTGCCGCCAATGGCTATTCGCACCCCAGTGGAACAGCGCTGCACTACGACGACGTCCCCTGCATCAACGGCTCGCTCAAGGGGAAGAAGCCCCCAGCAGCATCTAACGGGGTTCCGGGGAAAGGGAAGACTCTGAGCAGCCAGCAGAAAAAGGCAGATTCCACAGCCGGCATGAAGCGGACCCCTTCCAATGCCGACCAGTACAAATACGGCAAGAACCGGGTGGAGGCGGATGCCAAGCGCCTACAGACCAAAGAGGAGGAGCTGCTGCAGAGGAAGGAGGCGCTGCGGAACAGGCTGGCGCAGCTGCGGAAGGAGAGGAGAGACCTGCGGGCCGCCATCGAGGTGAACGCAGGCAGGAAGACCCAGGTGGTGCTGGAGGAGAAACTGAGGAAGCTGGAGGAGGAATGCAAGCAGAGGGAGGCGGAGCGCGTGAGCCTGGAGCTGGAGCTGACCGAGGTGAAGGAGAGCCTGAAGAAAGCCCTGGCTGGCGGCGTCACCCTGGGGCTGGCCATCGAGCCCAAGTCGGGGACATCGAGCCCACAGTCCCCTGTGTTCCGGCATCGGACTCTGGAGAACTCGCCAGTCTCCAGCTGTGACACGAGTGACGCCGAGGGGCCCCTGCCTGTGAACAGTGCCACGGTCCTGAGGAAGAGCCCGCCGGCCATGGGAAGCTCGCGCTGCCGGGGCCACGTGCTTCGGAAGGCCAAGGAGTGGGAACTGAAGAACGGGACCTAG

Related Sequences

XP_004847394.1 Protein

Afap1 PREDICTED: actin filament-associated protein 1 isoform X2 [Heterocephalus glaber]

Length: 728 aa      View alignments
>XP_004847394.1
MEELIVELRLFLELLDHEYLTSTVREKKAVLTNILLRIQSSRGFDVKDHAQKPETNSLPAPPQMPLPEIPQPWLPPDSGPPPLPTSSLPEGYYEEAVPLSPGKAPEYITANYDSDAMSSSYESYDEEEEDGKGKKARHQWPSEEASMDLVKDAKICAFLLRKKRFGQWTKLLCVIKDTKLLCYKSSKDQQPQMELPLQGCSIMYIPKDSKKKKHELKITQQGTDPLVLAVQSKEQAEQWLKVIKEAYSGCSGPSELECPPPASAPLQKAELEKKLSSERPSSDGEGAMENGVSCNGKEQVKRKKSSKAEAKGTVPKVAGKRITKIIGLGKKKPSTEEQTSSAEEDVPTCGYLNVLSNNRWRERWCRVKDNKLIFHKDRADLKTHIVSIPLRGCEVIPGLDSKHPLTFRLLRNGQEVAVLEASSSEDMGRWIGILLAETGSSTDPGALHYDYIDVEMSANVIQTAKQTFCFMNRRGLSTSPYLGSAANGYSHPSGTALHYDDVPCINGSLKGKKPPAASNGVPGKGKTLSSQQKKADSTAGMKRTPSNADQYKYGKNRVEADAKRLQTKEEELLQRKEALRNRLAQLRKERRDLRAAIEVNAGRKTQVVLEEKLRKLEEECKQREAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPVSSCDTSDAEGPLPVNSATVLRKSPPAMGSSRCRGHVLRKAKEWELKNGT