Sequence details NCBI ID: XM_004847335.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sorcs2
Gene Name sortilin-related VPS10 domain containing receptor 2, transcript variant X2
Entrez Gene ID 101716827

Database interlinks

Part of NW_004624755.1 (Scaffold)

For more information consult the page for NW_004624755.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SORCS2 ENSCPOG00000021058 (Guinea pig)

Gene Details

sortilin-related VPS10 domain containing receptor 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015385, Guinea pig)

Protein Percentage 86.85%
CDS Percentage 88.16%
Ka/Ks Ratio 0.09976 (Ka = 0.0687, Ks = 0.6883)

SORCS2 ENSG00000184985 (Human)

Gene Details

sortilin-related VPS10 domain containing receptor 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000422185, Human)

Protein Percentage 87.83%
CDS Percentage 86.82%
Ka/Ks Ratio 0.06063 (Ka = 0.0572, Ks = 0.943)

Sorcs2 ENSMUSG00000029093 (Mouse)

Gene Details

sortilin-related VPS10 domain containing receptor 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041828, Mouse)

Protein Percentage 85.19%
CDS Percentage 83.77%
Ka/Ks Ratio 0.06267 (Ka = 0.0742, Ks = 1.1836)

Sorcs2 ENSRNOG00000007033 (Rat)

Gene Details

sortilin-related VPS10 domain containing receptor 2 (Sorcs2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009960, Rat)

Protein Percentage 85.9%
CDS Percentage 83.6%
Ka/Ks Ratio 0.05624 (Ka = 0.0719, Ks = 1.278)

Genome Location

Sequence Coding sequence

Length: 2964 bp    Location: 23349026..23657637   Strand: +
Raw sequence   
>XM_004847335.1
ATGGGGAAGGTTCTGGAGAGTTCCCTGTGGCGGTCATCGGACTTCGGCACGTCCTACACCAAGCTCACCCTGCAGCCTGGTGTCACCACCATCATCGACAACTTCTACATCTGCCCGACCAACAAGAGGAAGATCATCCTGGTGAGCTCTTCGCTCAGTGACCGTGAGCAGAACCTCTTCCTGAGCACCGACGAGGGCACCAGCTTCCAGAGGCAGCCCATCACCTTCCTCGTGGAGACCCTCCTCTTCCACCCCAGGGACGAGGACAAGGTCCTGGCCTACACCAAGGAGAGCAAGCTCTATGTGTCATTGGACCTGGGAAAGAAGTGGACGCTTCTGCAGGAGCAAGTGACCAAAGACCATGTGTTCTGGGCTGTGTCTGGGGTGGACGCTGACCCCAACCTGGTCCACATGGAGACCCAGGACCTCAGTGGAGGTTTTCGCTATGTCACCTGCCAGATCCACAGCTGCTCCGACGAGATGCTCGCAGCCCCATTCCCCGGCCCCATTGACCATGGCTCGTTGGCGGTGCAGGACGACTACGTCCTCCTCAAGACAACCTCAACAAACCAGACCAAATACTACGTCTCTTACCGTCGCAATGAGTTCGTCCTGATGAAGCTGCCTAAGTACGCATTGCCGAAGGACCTGCAGGTGATCAGCACGGACGAGAGCCAGGTGTTTGTGGCGGTGCAGGAGTGGTACCAGACTGACACCTACAACCTGTACCAGTCGGACCCGCGCGGTGTGCGCTACGCGCTGGTGCTGGAGGATGTGCGAAGCTCGCGGCAGGCGGAGGAGAGTGTGCTCATCGACATCCTGGAGGTCAGAGGGGTGAAAGGGGTCTTTCTGGCGAACCGGAAGGTTGATGGAAAGGTGATGACACTCATCACCTACAACAAGGGCCGTGACTGGGACTTCCTGAGGCCGCCCAGCAGCGACATGAACGGCAAGCCCACCAACTGCCAGCCCCCTGACTGCCACCTGCACCTGCACCTGCGCTGGGCGGACAACCCCTACGTGTCGGGCACCGTGCACACCAAGGACACCACCCCCGGACTCATCATGGGCGCAGGTAACCTGGGCTCGCAGCTGGTGGAGTACAAGGAGGAGATGTACATCACGGCAGACTGCGGGCGCACCTGGCGGCAGGTGTTCGAGGAGGAGCATCACATCCTCTACCTGGACCACGGCGGCGTGATCGTGGCCATCAAGGACACCTCCATCCCCCTGAAGATCCTCAAGTTCAGCGTGGACGGAGGCGTCACGTGGAGCACGCACAACTTCACCAGCACCTCGGTGTTCGTGGACGGGCTGCTGAGCGAGCCGGGAGACGAGACGCTGGTCATGACGGTCTTTGGCCACATCAGCTTCCGCTCCGACTGGGAGCTGGTCAAGGTGGACTTCCGGCCCTCCTTCTCCAGGCCGTGTGGCGAGAACGACTACAGCTCCTGGGACCTCACCAGCCTCCAGGGCGACCGCTGCATCATGGGCCAGCAGAGGAGCTTCCGGAAGAGGAAGCCGGCGTCCTGGTGCGTCCAGGGCAGGAGCTTCACCTCGGCGCTCACAGCGCGTGTGTGCCAGTGCCGGGACTCGGACTTCCTCTGCGACTATGGGTTCGAGCGCACGCCCTCCTTGGAGCCGGGCACCAAGTGTGTAGCCAACTTCTGGTTCAACCCCCTGGCCCCTCCAGACGACTGCGCCGTGGGCCAGACCTACACCAGCAGCCTGGGGTACCGGAAGGTGGTGTCCAACGTGTGTGAGGGTGGCGTGGACCTGTGGCGGGGCCCAGGGCCACTGCAGTGTCCCCTCACGCGGCCCCGGGGCCTGCGGGTGAGCATCCTCGGTGAGGCAGTGGCCGTGCGGCCCGGAGAGGACGTGCTGTTCGTGGTGCGGCAGGAGCAGGGTGACATCCTGACCACCAAGTACCAGGTGGACCTGGGGGATGGCTTCAAGGCCATGTACGTGAACCTCACGCTGACTGCTGAGCCCATCCGGCACCGCTACGAGAGCCCCGGCGTCTACCGCGTGTCTGTCAGAGCAGAGAACGTGGCAGGCCATGACGAGGCCGTGCTCTTCGTCCAGGTCAACTCTCCCTTGCAAGCCCTCTACCTGGAAGTGGCTCCTGTCGTTGGCATCAACCAGGACATGAACCTCACAGCTGTGCTGCTGCCCCCGAACCCCAATCTCACTGTCTTCTACTGGTGGATCGGCCACAGCCTGCAGCCCCTCCTCTCCCTGGACAACTCGGTGACCACGCGCTTTGCGGCCCCGGGGGATGTGCGCGTGTCGGTGCAGGCGGCCTGCGGGAGCTCAGTGCTACAGGACTCCAGGGTGGTCCGCGTGCTGGACCAGTTCCAGCTGGTGCCTCTGTGCTTCTCCCGGGAGCTGGACGCCCTCAACCCCAACACACCTGAGTGGAGGGAGGACGTGGGCCTGGTGGTCACCCGGCTGCTCTCCAAGGAGACCAGTGTCCCCGAGGAGCTGCTGGTGACCGTGGTGAGACCAGGGCTGCCCACCGTGGCTGACCTGTATGTGCTGCTGCCGCCTCCCAGGCCCACGAGGAAGAGGAGCCTCTCGAGTGACAAGAGACTCACAGCCGTCCGGCAGGTGCTGAGCGCTCAGAAGATCAGCTTCCTGCTGCAGGGCGGGCTGCGCGTCCTAGTGGCCCTGAGGGACACAGACACAGAGTCACAGCGGCTGGGAGGCGGCAGCGGCTACTGGGCTGTGGTGGTCCTCTTCGTCGTGGGGGTCTTCGCGGTGGGCGCGATCGTCCTCTACAAGTTCAAAAGGAAACGCCCCGGCAGGACGGTGTACGCGCAGATGCACAACGAGAAGGAGCAGGAGATGACAAGCCCCGTGAGCCGCAGCGAGGACGCCCAGGGCACCGCCATGCAGGGCAACCACTCGGGCGTGGTCCTGAGCATCAACTCCCGGGAGATGCACGGCTACCTGGTGAGCTGA

Related Sequences

XP_004847392.1 Protein

Sorcs2 PREDICTED: VPS10 domain-containing receptor SorCS2 isoform X2 [Heterocephalus glaber]

Length: 987 aa      View alignments
>XP_004847392.1
MGKVLESSLWRSSDFGTSYTKLTLQPGVTTIIDNFYICPTNKRKIILVSSSLSDREQNLFLSTDEGTSFQRQPITFLVETLLFHPRDEDKVLAYTKESKLYVSLDLGKKWTLLQEQVTKDHVFWAVSGVDADPNLVHMETQDLSGGFRYVTCQIHSCSDEMLAAPFPGPIDHGSLAVQDDYVLLKTTSTNQTKYYVSYRRNEFVLMKLPKYALPKDLQVISTDESQVFVAVQEWYQTDTYNLYQSDPRGVRYALVLEDVRSSRQAEESVLIDILEVRGVKGVFLANRKVDGKVMTLITYNKGRDWDFLRPPSSDMNGKPTNCQPPDCHLHLHLRWADNPYVSGTVHTKDTTPGLIMGAGNLGSQLVEYKEEMYITADCGRTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKILKFSVDGGVTWSTHNFTSTSVFVDGLLSEPGDETLVMTVFGHISFRSDWELVKVDFRPSFSRPCGENDYSSWDLTSLQGDRCIMGQQRSFRKRKPASWCVQGRSFTSALTARVCQCRDSDFLCDYGFERTPSLEPGTKCVANFWFNPLAPPDDCAVGQTYTSSLGYRKVVSNVCEGGVDLWRGPGPLQCPLTRPRGLRVSILGEAVAVRPGEDVLFVVRQEQGDILTTKYQVDLGDGFKAMYVNLTLTAEPIRHRYESPGVYRVSVRAENVAGHDEAVLFVQVNSPLQALYLEVAPVVGINQDMNLTAVLLPPNPNLTVFYWWIGHSLQPLLSLDNSVTTRFAAPGDVRVSVQAACGSSVLQDSRVVRVLDQFQLVPLCFSRELDALNPNTPEWREDVGLVVTRLLSKETSVPEELLVTVVRPGLPTVADLYVLLPPPRPTRKRSLSSDKRLTAVRQVLSAQKISFLLQGGLRVLVALRDTDTESQRLGGGSGYWAVVVLFVVGVFAVGAIVLYKFKRKRPGRTVYAQMHNEKEQEMTSPVSRSEDAQGTAMQGNHSGVVLSINSREMHGYLVS