Sequence details NCBI ID: XM_004847280.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hs3st1
Gene Name heparan sulfate (glucosamine) 3-O-sulfotransferase 1, transcript variant X6
Entrez Gene ID 101698728

Database interlinks

Part of NW_004624755.1 (Scaffold)

For more information consult the page for NW_004624755.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HS3ST1 ENSCPOG00000026153 (Guinea pig)

Gene Details

heparan sulfate (glucosamine) 3-O-sulfotransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018150, Guinea pig)

Protein Percentage 85.71%
CDS Percentage 89.72%
Ka/Ks Ratio 0.13841 (Ka = 0.0673, Ks = 0.486)

HS3ST1 ENSG00000002587 (Human)

Gene Details

heparan sulfate (glucosamine) 3-O-sulfotransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000002596, Human)

Protein Percentage 91.78%
CDS Percentage 89.8%
Ka/Ks Ratio 0.04966 (Ka = 0.0364, Ks = 0.7326)

Hs3st1 ENSMUSG00000051022 (Mouse)

Gene Details

heparan sulfate (glucosamine) 3-O-sulfotransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113919, Mouse)

Protein Percentage 83.44%
CDS Percentage 82.68%
Ka/Ks Ratio 0.06656 (Ka = 0.0862, Ks = 1.2957)

Hs3st1 ENSRNOG00000010598 (Rat)

Gene Details

heparan sulfate (glucosamine) 3-O-sulfotransferase 1 (Hs3st1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014077, Rat)

Protein Percentage 83.44%
CDS Percentage 82.03%
Ka/Ks Ratio 0.07226 (Ka = 0.0919, Ks = 1.2712)

Genome Location

Sequence Coding sequence

Length: 927 bp    Location: 20010023..20039967   Strand: +
Raw sequence   
>XM_004847280.1
ATGGCCGCGCTGCTCCTGGGCGCGGTGCTGCTGGTGGCCCAGGCCCAGCTCCCGCCTGCCCACCCCGCCGGCCCCGGGGCCGAGCCCAGCCAGCAGGAGCCGCTGCGGAAGGCGGGGACCGTCCAGGACGACCTCCGAGCCGCCAACGGCTCCGCCAGGCAGCTGCCTCACACCATCATCATCGGGGTGCGCAAGGGCGGCACCCGCGCGCTGCTGGAGATGCTGAGCCTGCACCCCGACGTGGCGGCCGCCGAGAACGAGGTGCACTTCTTCGACTGGGAGGAGCACTACAGCCACGGCCTGCGCTGGTACCTCAGCCAGATGCCCCTGTCCGGGCCGCACCAGCTCACGGTGGAGAAGACGCCCGCCTACTTCACCTCGCCCAAAGTGCCTGGGCGCGTGCACAGCATGAACCCGGCCACGCGCCTGCTGCTCATCCTGCGGGACCCGTCGGAGCGGGTGCTGTCCGACTACACCCAGGTGTTCTACAACCACATGCAGAAACGCAAGCCCTACCCGTCCATCGAGGAGTTCCTGGTGCGCGACGGCCGACTCAACGTGGACTACAAGGCGCTCAACCGCAGCCTCTACCACGTGCACATGCAGAACTGGATGCGCTTCTTCCCCCTGCGCAGCATCCACATTGTGGACGGCGACCGCCTCATCAGGGACCCCTTCCCCGAGATCCAGAAGGTTGAGCGTTTCCTCGAGCTGGCGCCCCAGATCAACGCCTCGAACTTCTACTTCAACAAAACCAAGGGCTTTTACTGCCTCCGGGACAGTGGGCGGGACCGCTGCCTGCACGAGTCCAAAGGCCGGGCGCACCCGCAAGTGGATCCCAAACTACTCAGTAAACTGCACGAGTATTTTCATGAGCCAAATAAGAAATTCTTCGAACTCGTGGGCAGAACATTTGACTGGCACTGA

Related Sequences

XP_004847337.1 Protein

Hs3st1 PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 1 isoform X6 [Heterocephalus glaber]

Length: 308 aa      View alignments
>XP_004847337.1
MAALLLGAVLLVAQAQLPPAHPAGPGAEPSQQEPLRKAGTVQDDLRAANGSARQLPHTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLRWYLSQMPLSGPHQLTVEKTPAYFTSPKVPGRVHSMNPATRLLLILRDPSERVLSDYTQVFYNHMQKRKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWMRFFPLRSIHIVDGDRLIRDPFPEIQKVERFLELAPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRAHPQVDPKLLSKLHEYFHEPNKKFFELVGRTFDWH