Details from NCBI annotation

Gene Symbol Ldb2
Gene Name LIM domain binding 2, transcript variant X2
Entrez Gene ID 101714723

Database interlinks

Part of NW_004624755.1 (Scaffold)

For more information consult the page for NW_004624755.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LDB2 ENSCPOG00000004252 (Guinea pig)

Gene Details

LIM domain binding 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003835, Guinea pig)

Protein Percentage 99.46%
CDS Percentage 95.88%
Ka/Ks Ratio 0.01517 (Ka = 0.0025, Ks = 0.1661)

LDB2 ENSG00000169744 (Human)

Gene Details

LIM domain binding 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000306772, Human)

Protein Percentage 98.92%
CDS Percentage 94.71%
Ka/Ks Ratio 0.01855 (Ka = 0.0047, Ks = 0.2539)

Ldb2 ENSMUSG00000039706 (Mouse)

Gene Details

LIM domain binding 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000067737, Mouse)

Protein Percentage 97.85%
CDS Percentage 92.56%
Ka/Ks Ratio 0.02812 (Ka = 0.0098, Ks = 0.3474)

Ldb2 ENSRNOG00000003205 (Rat)

Gene Details

LIM domain binding 2 (Ldb2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000055594, Rat)

Protein Percentage 98.39%
CDS Percentage 93.37%
Ka/Ks Ratio 0.0249 (Ka = 0.0074, Ks = 0.2982)

Genome Location

Sequence Coding sequence

Length: 1119 bp    Location: 14962528..15358771   Strand: +
>XM_004847239.1
ATGTCCAGCACACCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACACACACCCTACATGGTACAGCCAGAGTACCGGATCTATGAGATGAACAAGAGACTGCAGTCTCGCACAGAGGACAGTGACAACCTCTGGTGGGACGCTTTTGCCACTGAATTTTTTGAAGACGACGCCACATTAACTCTTTCATTTTGTTTGGAAGATGGACCAAAGCGATACACTATTGGTAGGACCCTCATCCCTCGTTACTTCAGCACTGTGTTTGAGGGAGGGGTGACTGACCTGTATTACATTCTCAAGCACTCGAAAGAATCCTACCACAACTCCTCCATCACAGTGGACTGCGACCAGTGTGCCATGGTCACCCAGCACGGGAAGCCCATGTTCACCAAGGTGTGTACAGAAGGCAGGCTGATCTTGGAGTTCACCTTCGATGATCTCATGAGAATAAAAACATGGCACTTTACCATTAGACAATACAGAGAGCTGGTCCCCAGAAGCATACTAGCCATGCATGCACAAGATCCTCAGGTCCTGGATCAGCTGTCTAAAAACATCACCAGGATGGGTCTAACCAACTTCACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAGCTGATGTCGAGACATAAAACCTACAACCTCAGTCCCCGAGACTGCCTCAAGACCTGCTTGTTTCAGAAGTGGCAGCGGATGGTGGCGCCGCCAGAACCCACAAGGCAACCGACAACCAAAAGGAGAAAAAGAAAAAATTCCACCAGCAGCACCTCCAACAGCAGTGCGGGGAACAATGCCAACAGTACTGGCAGCAAAAAGAAGACGACAGCTGCAAACCTGAGTCTGCCCACTCAGGTACCTGATGTGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTGAGTTTGGGGACGAGGACGAAAGGCTAATCACTAGATTAGAAAACACGCAGTATGATGCGGCCAACGGCATGGACGACGAGGAGGACTTCAACAGTTCCCCCGCCCTGGGAAACAACAGCCCATGGAACAGTAAACCTCCCGCCACGCAAGAGACCAAATCAGAAAATCCCCCACCCCAGGCTTCCCAGTAA

Related Sequences

XP_004847296.1 Protein

Ldb2 PREDICTED: LIM domain-binding protein 2 isoform X2 [Heterocephalus glaber]

Length: 372 aa      View alignments
>XP_004847296.1
MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCAMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPEPTRQPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANLSLPTQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQYDAANGMDDEEDFNSSPALGNNSPWNSKPPATQETKSENPPPQASQ