Sequence details NCBI ID: XM_004847138.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ptchd4
Gene Name patched domain containing 4
Entrez Gene ID 101700275

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000005747 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018023, Guinea pig)

Protein Percentage 96.27%
CDS Percentage 93.86%
Ka/Ks Ratio 0.09475 (Ka = 0.0199, Ks = 0.2099)

Genome Location

Sequence Coding sequence

Length: 2991 bp    Location: 13079561..13256893   Strand: +
Raw sequence   
>XM_004847138.1
ATGGAGATTGGGGGGCGGAGTGCTTTGGTGCGGAAGGGAGGGAGGGTGTTTTGGGGGGGCGGAGATAGCGGGGCGCCAGGGCCGGGGGGGCGGGGCGTCTCGGTGTCGGGGCGGGGTGTCGGGGTGCCGTGGGCGGGCTGTCTTGGTGTCGGGGGGCGGGGTGTCGGCGTGCCGGGGGCGGGGTGTTTTGGTGCCGGAGGCTCCGCCGGCCGCATGGGTGCCTCGTGGAGTGAAGCGGTGCGGGGCCCGCGGGGCTCGCGGGGGCGCGCGGGGAGCGGCGCAGGCACACGCGCTAGTCCCGGGCGGCCCCGCGGTCCGCACCTGAGAATGCTGCGGCAGGCGCTCCGCGGAGGGCTGCGGGCGTGCGGCCGCGGGCTGGGCGTGTGCGTGGGCCGCCACCCCGTCCTCTTCCTCACCGTGCCCGCCGTGCTGACCATCGCCTGCGGCCTCAGTGCGCTGCGCCGCTTCCAGCCCGAGGGCGACCTGGAGCGCCTGGTGGCCCCTAGCCACAGCCTGGCCAAGATCGAGCGCAGCCTGGCCGACAGCCTCTTCCCGCTGGAGCAGTCCAAAAGCCAGCTCTATTCGGACTTGCACACCCCTGGGAGGTACGGCAGGGTGATCCTCCTCTCGCCACTCGGGGACAATGTTTTGCTCCAGGCCGAGGGGATCCTGCAGACCCACCGAGCCGTGCTGGAAATGAAGGTGAACCACAGGGGCTATAATTATACTTTTTCCCATCTGTGTGTGTTGAGAAATCAGGATAAGAAATGCGTGCTGGATGATATTATTTCAGTACTAGAGGATCTCAGGCAGGCTGCCGTCTCCAATAAGACAACAGCCAGGGTGCAAGTGAGGTATCCCAACACTAAATTAAAGGATGGGAGGAACAGTTTCATTGGACATCAGCTGGGCGGGGTAGTGGAAGTGCCCAACAGCAAAGACCAGCGGGTCAAGTCTGCCAGAGCCATTCAAATCACCTACTACCTCCAGACCTATAGCTCTGCCACCCAAGACCTCATAGGGGAGAAGTGGGAGAATGAGTTCTGTAAGCTCGTGAGGAAGCTCCAGGAGGAGCACCAAGACCTCCAGCTCTACCCTCTCGCATCCTTCAGCCTCTGGAGAGACTTCCATAAGACCAGCATCCTCGCCAGAAGCAAGGTGCTGGTGAGCCTCGTGTTAATCCTGACCACAGCCACGCTGTCCAGCTCCATGAAGGACTGTTTGCGCAGCAAGCCCTTCCTGGGCCTGCTGGGGGTGCTCACCGTGTGCATCTCCCTGGTCACGGCAGCCGGGATCTTCTTCATCACGGACGGGAAGTACAACTCCACCCTGCTGGGAATCCCGTTCTTCGCCATGGGACATGGGACAAAAGGTGTGTTTGAGCTTCTGTCTGGATGGCGGAGAACTAAAGAGAATTTGTCCTTTAAAGATAGGGTCGCAGATGCCTACTCTGATGTGATGGTTACCTACACTATGACCAGCTCCCTGTACTTCATCACTTTTGGAATGGGTGCCAGCCCTTTCACAAACATAGAGGCTGTGAAAGTCTTCTGCCAGAACATGTGCATCTCTATCCTGTTGAACTACTTCTACATTTTCTCCTTTTTTGGCTCCTGCCTGGTCTTCGCTGGCCAACTAGAACAAAACCGCTATCACAGCATCTTCTGCTGCAAGATCCCCTCTGCAGAGTACCTGGACCGCAAGCCCATGTGGTTCCAGATGGTGATGAGTGACGGACACCAGCAGATGTCCCACCATGAGACAAACCCCTACCAGCACCACTTCATCCAGCACTTCCTCCGGGAGCACTACAATGAGTGGATCACTAACATCTACGTGAAGCCATTTGTCGTCATCCTCTATCTCATTTATGCCTCCTTCTCCTTCATGGGGTGTTTGCAGATCAGTGATGGAGTCAACATCATCAACCTTCTGGCCAGTGATTCTCCGAGTGTTTCCTATGCCATGGTTCAGCAGAAATACTTCAGCAACTACAGCCCTGTGATCGGGTTCTACATCTATGAGCCCCTTGAGTACTGGAACAGCAGTGTCCAGGAGGACCTCCAGAAGCTCTGCAGCGGCTTCACCACAGTGTCCTGGGTCGACCAGTATTACCAGTTCCTGAAAGCCAGTAACATCAGCGCCAGCAACAAGAGTGACTTCATCAGTGTCCTGCAAAGCTCATTTTTAAAAAAGCCAGAGTTCCAGCACTTTCGAAACGATATCATCTTCTCCAAGGCAGGGGATGAAAACAGTATCATTGTTTCCCGCATGTACCTGGTGGCCAGGACCAGCAGAGACAAGCAGAAGGAACGCATAGAAGTGCTGGAAAAGCTGAGGCCCCTGTCACTTTCAAAGAGCATCCGGTTCATTGTGTTCAACCCCTCCTTTGTGTTCATGGACCACTACAGCCTGTCTGTTACCGTGCCTGTGCTGATTGCAGGCTTCGGTGTGCTGCTGGTGTTAATCCTGACGTTTTTCCTAGTGATCCACCCCTTGGGGAACTTCTGGCTCATTCTTAGCGTCACCTCAGTTGAACTGGGTGTTCTGGGTTTAATGACACTATGGAATGTCGACATGGATTGGATTTCTATCTTGTGCCTTATCTACACTTTAAACTTCGCCATTGACCACTGTGCACCCTTGCTTTACACGTTTGTGTTAGCCACTGAGCCCACGCGAACACAATGTATAAAAAGCTCACTGCAAGAGCATGGAACAGCCATTTTGCAGAATATCACTTCTTTTCTTATTGGGTTGTTCCCCCTCCTCTTTGTGCCTTCAAACCTGACCTTCACACTGTTCAAATGCTTGCTGCTTACTGGGGGTTGCACATCTCTGCACTGTTTTGTTATTTTACCTGTGTTCCTAACCTTTTTCCCTCCTTCCAAAAAGCACCACAAGAAAAAGAAACGTGCCAAACGAAAGGAGAGAGAAGAAATTGAATGCATAGAAATTCAAGAGAACCCCGATCATGTCACCACAGTCTGA

Related Sequences

XP_004847195.1 Protein

Ptchd4 PREDICTED: patched domain-containing protein 4 [Heterocephalus glaber]

Length: 996 aa      
>XP_004847195.1
MEIGGRSALVRKGGRVFWGGGDSGAPGPGGRGVSVSGRGVGVPWAGCLGVGGRGVGVPGAGCFGAGGSAGRMGASWSEAVRGPRGSRGRAGSGAGTRASPGRPRGPHLRMLRQALRGGLRACGRGLGVCVGRHPVLFLTVPAVLTIACGLSALRRFQPEGDLERLVAPSHSLAKIERSLADSLFPLEQSKSQLYSDLHTPGRYGRVILLSPLGDNVLLQAEGILQTHRAVLEMKVNHRGYNYTFSHLCVLRNQDKKCVLDDIISVLEDLRQAAVSNKTTARVQVRYPNTKLKDGRNSFIGHQLGGVVEVPNSKDQRVKSARAIQITYYLQTYSSATQDLIGEKWENEFCKLVRKLQEEHQDLQLYPLASFSLWRDFHKTSILARSKVLVSLVLILTTATLSSSMKDCLRSKPFLGLLGVLTVCISLVTAAGIFFITDGKYNSTLLGIPFFAMGHGTKGVFELLSGWRRTKENLSFKDRVADAYSDVMVTYTMTSSLYFITFGMGASPFTNIEAVKVFCQNMCISILLNYFYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYLDRKPMWFQMVMSDGHQQMSHHETNPYQHHFIQHFLREHYNEWITNIYVKPFVVILYLIYASFSFMGCLQISDGVNIINLLASDSPSVSYAMVQQKYFSNYSPVIGFYIYEPLEYWNSSVQEDLQKLCSGFTTVSWVDQYYQFLKASNISASNKSDFISVLQSSFLKKPEFQHFRNDIIFSKAGDENSIIVSRMYLVARTSRDKQKERIEVLEKLRPLSLSKSIRFIVFNPSFVFMDHYSLSVTVPVLIAGFGVLLVLILTFFLVIHPLGNFWLILSVTSVELGVLGLMTLWNVDMDWISILCLIYTLNFAIDHCAPLLYTFVLATEPTRTQCIKSSLQEHGTAILQNITSFLIGLFPLLFVPSNLTFTLFKCLLLTGGCTSLHCFVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEIQENPDHVTTV