Sequence details NCBI ID: XM_004847126.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gabbr1
Gene Name gamma-aminobutyric acid (GABA) B receptor, 1, transcript variant X3
Entrez Gene ID 101719480

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GABBR1 ENSCPOG00000012930 (Guinea pig)

Gene Details

gamma-aminobutyric acid (GABA) B receptor, 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011642, Guinea pig)

Protein Percentage 97.4%
CDS Percentage 91.59%
Ka/Ks Ratio 0.03649 (Ka = 0.0151, Ks = 0.4139)

GABBR1 ENSG00000204681 (Human)

Gene Details

gamma-aminobutyric acid (GABA) B receptor, 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000366233, Human)

Protein Percentage 98.0%
CDS Percentage 91.88%
Ka/Ks Ratio 0.02307 (Ka = 0.0099, Ks = 0.4294)

Gabbr1 ENSMUSG00000024462 (Mouse)

Gene Details

gamma-aminobutyric acid (GABA) B receptor, 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025338, Mouse)

Protein Percentage 97.77%
CDS Percentage 90.24%
Ka/Ks Ratio 0.01987 (Ka = 0.0109, Ks = 0.5501)

Gabbr1 ENSRNOG00000000774 (Rat)

Gene Details

gamma-aminobutyric acid (GABA) B receptor 1 (Gabbr1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000047788, Rat)

Protein Percentage 97.55%
CDS Percentage 89.79%
Ka/Ks Ratio 0.0227 (Ka = 0.0135, Ks = 0.5956)

Genome Location

Sequence Coding sequence

Length: 2709 bp    Location: 25425249..25452600   Strand: +
Raw sequence   
>XM_004847126.1
ATGCTGCCGCCGCCGCCGCTGCTGCTGCTGGCGCCTCTCTTCCTGCGGCCCCTGGGCGCCGTCGGGGCGCAGACCCCCAACGCCACCTCGGAAGGTTGCCAGATCATACACCCGCCCTGGGAAGGGGGCATCCGCTACCGGGGCCTGACTCGGGACCAGGTGAAGGCCATCAACGTCCTGCCAGTGGACTATGAGATCGAGTATGTATGCCGCGGGGAGCGCGAGGTTGTGGGGCCCAAGGTTCGCAAGTGCCTGGCCAACGGCTCCTGGACGGACATGGACACCCCCAGCCGCTGTGTGAACCGAACGCCACACTCAGAGCGGCGCGCAGTCTACATCGGGGCGCTGTTCCCCATGAGCGGGGGCTGGCCCGGGGGCCAGGCCTGCCAGCCCGCGGTAGAGATGGCGCTGGAGGACGTGAACAGCCGCAGGGACATCCTGCCGGACTACGAGCTCAAGCTCATCCACCACGACAGCAAGTGTGACCCAGGGCAAGCCACCAAGTACTTGTATGAGCTGCTCTACAACGACCCCATCAAGATCATCCTCATGCCTGGCTGCAGCTCTGTCTCTACACTTGTGGCTGAGGCTGCCCGGATGTGGAACCTCATTGTGCTTTCCTACGGCTCCAGCTCACCAGCGCTGTCGAACCGGCAGCGCTTCCCCACGTTCTTCCGCACACACCCGTCAGCCACGCTGCACAACCCTACCCGCGTGAAGCTCTTTGAAAAGTGGGGCTGGAGGAAGATTGCCACCATCCAGCAGACCACGGAGGTCTTCACGTCGACTCTGGATGACCTAGAGGAGCGAGTGAAGGAGGCTGGAATCGAGATTACCTTCCGCCAGAGTTTCTTCTCGGATCCGGCTGTGCCGGTCAAGAACCTGAAGCGCCAGGATGCCCGGATCATCGTGGGACTTTTCTATGAGACCGAAGCCCGGAAAGTGTTTTGTGAGGTGTACAAGGAGCGGCTCTTTGGGAAGAAGTATGTCTGGTTCCTCATTGGGTGGTACGCTGACAATTGGTTCAAGACGTATGACCCGTCCATCAACTGCACAGTAGACGAGATGACCGAGGCAGTGGAGGGCCATATCACCACTGAGATTGTCATGCTGAACCCGGCCAACACCCGGAGCATTTCCAACATGACATCCCAGGAATTTGTGGAGAAACTAACCAAGCGACTCAAAAGACACCCTGAGGAGACTGGAGGCTTTCAGGAGGCACCACTGGCCTATGATGCCATCTGGGCCCTGGCGTTGGCCTTGAACAAGACGTCTGGAGGAGGTGGCCGTTCAGGTGTGCGCCTGGAGGACTTCAACTACAACAACCAGACCATTACCGACCAGATCTACCGGGCGATGAATTCCTCATCCTTCGAGGGTGTCTCCGGCCATGTGGTGTTTGATGCAAGTGGCTCCCGGATGGCTTGGACACTTATTGAGCAGTTACAGGGTGGCAGCTACAAGAAGATCGGCTACTATGACAGCACCAAGGATGACCTTTCCTGGTCCAAAACAGATAAGTGGATTGGAGGGACCCCCCCGGCCGACCAGACCCTGGTCATCAAGACATTCCGCTTCCTGTCGCAGAAACTCTTCATCTCCGTCTCGGTTCTCTCCAGCTTGGGGATTGTTCTAGCTGTTGTCTGTCTGTCGTTTAACATCTACAACTCTCACGTCCGTTACATCCAGAACTCACAGCCTAACCTGAACAATCTGACTGCTGTGGGCTGCTCACTGGCATTAGCTGCTGTCTTCCCCCTTGGGCTGGATGGCTACCACATCGGGAGGAACCAGTTCCCTTTTGTCTGCCAGGCCCGCCTCTGGCTCCTGGGCCTGGGCTTTAGTCTGGGCTATGGCTCCATGTTCACCAAGATCTGGTGGGTCCACACAGTCTTCACAAAGAAGGAAGAGAAGAAGGAATGGAGGAAGACTCTGGAGCCTTGGAAGCTGTATTCCACGGTGGGCCTGCTGGTGGGCCTGGATGTCCTTACTCTCGCCGTCTGGCAGATCGTGGACCCCTTGCACCGGACCATCGAGACTTTTGCCAAGGAAGAGCCAAAGGAAGACATTGATGTCTCTATTCTGCCCCAGCTGGAGCACTGCAGCTCCAAGAAGATGAATACGTGGCTTGGTATTTTCTATGGGTATAAGGGCCTGCTGCTGCTGCTGGGAATCTTTCTTGCTTATGAGACCAAAAGTGTATCCACTGAGAAGATCAACGACCACAGGGCTGTGGGCATGGCCATCTACAATGTGGCGGTCCTGTGCCTCATTACCGCCCCTGTCACCATGATCCTGAGCAGCCAGCAGGACGCAGCCTTTGCCTTTGCCGCCCTCGCCATCGTCTTCTCCTCCTACATCACTCTGGTTGTGCTGTTTGTGCCCAAGATGCGCAGGCTGATCACCCGAGGTGAGTGGCAGTCGGAGGCCCAGGACACCATGAAGACAGGGTCGTCGACCAACAACAACGAGGAGGAGAAGGCCCGGCTCTTGGAGAAGGAGAACCGCGAACTGGAAAAGGTCGTTGCTGAGAAAGAGGAGCGGGTCTCCGAGCTGCGCCACCAGCTCCAGTCTCGGCAGCAGCTTCGCTCCCGGCGCCACCCCCCGACGCCCCCAGACCCTTCTGGAGGCCCAGCCAGGGGCCCCCCCGAGCCCCCCGACCGGCTTAGCTGTGATGGGAGTCGAGTCCATTTGCTCTACAAGTGA

Related Sequences

XP_004847183.1 Protein

Gabbr1 PREDICTED: gamma-aminobutyric acid type B receptor subunit 1 isoform X3 [Heterocephalus glaber]

Length: 902 aa      View alignments
>XP_004847183.1
MLPPPPLLLLAPLFLRPLGAVGAQTPNATSEGCQIIHPPWEGGIRYRGLTRDQVKAINVLPVDYEIEYVCRGEREVVGPKVRKCLANGSWTDMDTPSRCVNRTPHSERRAVYIGALFPMSGGWPGGQACQPAVEMALEDVNSRRDILPDYELKLIHHDSKCDPGQATKYLYELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATLHNPTRVKLFEKWGWRKIATIQQTTEVFTSTLDDLEERVKEAGIEITFRQSFFSDPAVPVKNLKRQDARIIVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKTYDPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRLKRHPEETGGFQEAPLAYDAIWALALALNKTSGGGGRSGVRLEDFNYNNQTITDQIYRAMNSSSFEGVSGHVVFDASGSRMAWTLIEQLQGGSYKKIGYYDSTKDDLSWSKTDKWIGGTPPADQTLVIKTFRFLSQKLFISVSVLSSLGIVLAVVCLSFNIYNSHVRYIQNSQPNLNNLTAVGCSLALAAVFPLGLDGYHIGRNQFPFVCQARLWLLGLGFSLGYGSMFTKIWWVHTVFTKKEEKKEWRKTLEPWKLYSTVGLLVGLDVLTLAVWQIVDPLHRTIETFAKEEPKEDIDVSILPQLEHCSSKKMNTWLGIFYGYKGLLLLLGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQDAAFAFAALAIVFSSYITLVVLFVPKMRRLITRGEWQSEAQDTMKTGSSTNNNEEEKARLLEKENRELEKVVAEKEERVSELRHQLQSRQQLRSRRHPPTPPDPSGGPARGPPEPPDRLSCDGSRVHLLYK