Details from NCBI annotation

Gene Symbol Rnf39
Gene Name ring finger protein 39, transcript variant X1
Entrez Gene ID 101717287

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNF39 ENSCPOG00000026913 (Guinea pig)

Gene Details

ring finger protein 39

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020021, Guinea pig)

Protein Percentage 83.64%
CDS Percentage 86.36%
Ka/Ks Ratio 0.15475 (Ka = 0.0836, Ks = 0.5404)

RNF39 ENSG00000204618 (Human)

Gene Details

ring finger protein 39

External Links

Gene Match (Ensembl Protein ID: ENSP00000244360, Human)

Protein Percentage 86.25%
CDS Percentage 86.53%
Ka/Ks Ratio 0.09772 (Ka = 0.0673, Ks = 0.6892)

Rnf39 ENSMUSG00000036492 (Mouse)

Gene Details

ring finger protein 39

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000037860, Mouse)

Protein Percentage 82.81%
CDS Percentage 81.95%
Ka/Ks Ratio 0.09444 (Ka = 0.0919, Ks = 0.9728)

Rnf39 ENSRNOG00000000781 (Rat)

Gene Details

ring finger protein 39 (Rnf39), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001014, Rat)

Protein Percentage 80.8%
CDS Percentage 81.09%
Ka/Ks Ratio 0.10066 (Ka = 0.1029, Ks = 1.0226)

Genome Location

Sequence Coding sequence

Length: 1050 bp    Location: 25331070..25335153   Strand: +
>XM_004847117.1
ATGGAGGCAGCCGAGCTGGGCCCGGGGCTGGTGGAGCGTCTGGAGCAGCTGGCGACGTGTCCGCTGTGTGGGGGCCCCTTCGAGGACCCGGTGCTCCTGGCGTGCGAGCACAGCTTCTGCCGCGCGTGCCTGGCCCGCCGCTGGGGGGCGCCGCCGCGGCCCGGCACCCAGGCGCCCCCGCCCGCCTGCCCGCGCTGCGGCCTGCCGTGCCCCCGCCGCAGCCTGAGGTCCAACGTGCGGCTGGCCGTGGAGGTGCGGATCAGCTGCGGGCTGCGGGAGAAGCTGGCCGAGCCGGGGGTCCGCGCGGGACGGCGCCGCGGGGGCCGCATCCCCACCATGGGCTGCCTGGACTCGCACGGAGAGGATGTGAGGAAGACCTGGAGACGGTTTAATGTCGCCACGCCCAAGTCATCTAACTCGGAGGAAGAGCTCCCTGAAGAGTACCCTGTGGTCAAAAACATGCTTCACAGACTGACAGCCGACCTGACGCTGGACCCGGGCACCGCGCACCGCCGCCTGCTCGTCTCTGCCGACCGCCGCGGCGTCCGCCTGGCCCCACCCGGGACGCCAGCGCCCCCAGACGGCCCCGAGCGCTTTGATCAGCTCCCGGCGGTGCTGGGCGCTCAGGGCTTCGGCGCTGGGCGCCACTGCTGGGAGGTGGAGACTGCCTCCTGCAGAGACGCCCCCGGGGAGGACGCGGAAGACGCCCAGAGCCACTACGCCGTGGGCGCGGCCGGGGAGTCGGTGCCACGCAAGGGCTGCGTCCGGCTGTGCCCCGCCGAGGCCATCTGGGCCCTGGAGGGCCGCGGCGGCCGCCTCTGGGCCCTCACGGCCCCGGAGCCCACCCTGCTGGGCGGCGCCGGGCCGGAGCCCCGCTGCATCCGCGTGGACCTGGACTGCGAGCGCGGCCGCGTGGCCTTCTACGATGGCCGCTCGCTCGACCTGCTCTTCGCCTTCCAGGCGCCCGGGCCCCTGGGGCAGCGCATCTTCCCGCTGCTCTGCACCTGCGACCCCCGCACCCCGCTGCGCCTGGTGCCTGGAGAGGGCTGA

Related Sequences

XP_004847174.1 Protein

Rnf39 PREDICTED: RING finger protein 39-like isoform X1 [Heterocephalus glaber]

Length: 349 aa      View alignments
>XP_004847174.1
MEAAELGPGLVERLEQLATCPLCGGPFEDPVLLACEHSFCRACLARRWGAPPRPGTQAPPPACPRCGLPCPRRSLRSNVRLAVEVRISCGLREKLAEPGVRAGRRRGGRIPTMGCLDSHGEDVRKTWRRFNVATPKSSNSEEELPEEYPVVKNMLHRLTADLTLDPGTAHRRLLVSADRRGVRLAPPGTPAPPDGPERFDQLPAVLGAQGFGAGRHCWEVETASCRDAPGEDAEDAQSHYAVGAAGESVPRKGCVRLCPAEAIWALEGRGGRLWALTAPEPTLLGGAGPEPRCIRVDLDCERGRVAFYDGRSLDLLFAFQAPGPLGQRIFPLLCTCDPRTPLRLVPGEG