Details from NCBI annotation

Gene Symbol Trim10
Gene Name tripartite motif containing 10, transcript variant X1
Entrez Gene ID 101713800

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM10 ENSCPOG00000000013 (Guinea pig)

Gene Details

tripartite motif containing 10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000011, Guinea pig)

Protein Percentage 76.63%
CDS Percentage 81.75%
Ka/Ks Ratio 0.21395 (Ka = 0.1411, Ks = 0.6595)

TRIM10 ENSG00000204613 (Human)

Gene Details

tripartite motif containing 10

External Links

Gene Match (Ensembl Protein ID: ENSP00000397073, Human)

Protein Percentage 80.17%
CDS Percentage 82.19%
Ka/Ks Ratio 0.14744 (Ka = 0.1098, Ks = 0.745)

Trim10 ENSMUSG00000073400 (Mouse)

Gene Details

tripartite motif-containing 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000057928, Mouse)

Protein Percentage 78.91%
CDS Percentage 79.75%
Ka/Ks Ratio 0.1272 (Ka = 0.1205, Ks = 0.9475)

Trim10 ENSRNOG00000000782 (Rat)

Gene Details

tripartite motif-containing 10 (Trim10), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001016, Rat)

Protein Percentage 78.29%
CDS Percentage 78.98%
Ka/Ks Ratio 0.11526 (Ka = 0.1219, Ks = 1.0575)

Genome Location

Sequence Coding sequence

Length: 1440 bp    Location: 25266535..25274292   Strand: +
>XM_004847105.1
ATGGCCGCCGCCGCGAGCAGCCTGGCGGACGAGGTCAGCTGCCCCATCTGCCGGGCCGCCCTGCGGCAGCCGGTCACCATCGACTGCGGCCACAACTTCTGCCGCGACTGCCTGGTGCGCTACTGCGAGACGCCGGGCCCCGAGCCCGCTGAGCCGCTCGCCTGCCCGCTCTGCCGGGAGCCCTTCCACCGCGGGAGCCTAAGGCCCAACTGGCAGCTGGCCGGCGTGGTGGAGAGCATCGAGCGCCTGCAGCGGGGGCCCTCGCCGGGCCCCGGGGCGCAGGGCGGCTGCCCCGAGCACGGGGAGAAGCTCTACTTCTTCTGCGAGGACGACGAGGCGCAGCTGTGCGTGCTGTGCCGCGAGGCCGGGGCGCACAGCGCCCACACCGTGCGCTTCCTGGAGCAGGCGGCAGCGCCCTACAGGGAACAAATACAGAAGTGTCTTGTGAGTCTAAGAAAAGAGAGAGACGAGATTCAAGAGATCCAGTCAAGAGAAAATAAAAGGATACAGGTCCTGCTGGCTCAGGTGGCCACCAGGAGACAGCAGGTGATTTCCGAGTTTGCACATCTGAGCCGTTTTCTGGAGGAACAGCAGAGCATCCTTCTGTCACAACTAGAAGAGCTGGACGGGGACATCCTGAGCCAACAGGAAGAGTTCGGTCACCTGGTCGCCGGGGAGATCTGCCGGTTTAGAGCCCTGATTGAAGAGCTGGAGGAGAAGAGCCACAGGCCAGCCAGGGAGCTCCTGACGGGTATCAGGAGCACCCTAATAAGGTGTGAAACCAGAAAGTGCCGCAAACCAGAGGCCGTGTCCCCAGAGCTGGGCCAGCAGATCCGGGACTTCCCCAGGCGGGCCCTCCCGCTGCAGAGAGAGGTGAAGATGTTCCTGGAAAAACTCTGCTTTGAATTGGACTATGAGCCAGCTCACATCTCTCTGGACCCCCAGACTTCCCACCCCAAGCTCCTGCTGTCTGAGGACCACCAGCGGGCTCAGTTCTCCTACAAATGGCAAACTTCACCGGACAGCCCCCAGCGCTTTGACCGGGCCACCTGCGTGCTGGGCCTTCGTGGCTTCACTGGCGGGCGACACACGTGGGTGGTGAGCGTGGACCTGGCCCACGGAGGCAGCTGCACCGTGGGGGTGGTGAACGGGGATGTGCGGCGGAAGGGGGAGCTGCGCCTGCGGCCGGAGGATGGGGTGTGGGCCGTGCGGCTGGCCTGGGGCTTTGTGTCTGCCCTGGGCTCCTTCCCCACCCGCCTAGCCCTGGAGGAGCAGCCCAGGCGGCTGCGGGTGTCCCTGGACTACGAGGTGGGCTGGGTGACCTTCTGCAACGCTGCCACCCAGGAGCACGTCCACACCTTCACGGCTTCCTTCACTCAGGAGCTCTTTCCCTTCTTCGGGGTCTGGGGCCGAGGGTCTGGCTTCTCCCTGAGCTACTGA

Related Sequences

XP_004847162.1 Protein

Trim10 PREDICTED: tripartite motif-containing protein 10 isoform X1 [Heterocephalus glaber]

Length: 479 aa      View alignments
>XP_004847162.1
MAAAASSLADEVSCPICRAALRQPVTIDCGHNFCRDCLVRYCETPGPEPAEPLACPLCREPFHRGSLRPNWQLAGVVESIERLQRGPSPGPGAQGGCPEHGEKLYFFCEDDEAQLCVLCREAGAHSAHTVRFLEQAAAPYREQIQKCLVSLRKERDEIQEIQSRENKRIQVLLAQVATRRQQVISEFAHLSRFLEEQQSILLSQLEELDGDILSQQEEFGHLVAGEICRFRALIEELEEKSHRPARELLTGIRSTLIRCETRKCRKPEAVSPELGQQIRDFPRRALPLQREVKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQTSPDSPQRFDRATCVLGLRGFTGGRHTWVVSVDLAHGGSCTVGVVNGDVRRKGELRLRPEDGVWAVRLAWGFVSALGSFPTRLALEEQPRRLRVSLDYEVGWVTFCNAATQEHVHTFTASFTQELFPFFGVWGRGSGFSLSY