Sequence details NCBI ID: XM_004847058.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ddr1
Gene Name discoidin domain receptor tyrosine kinase 1, transcript variant X1
Entrez Gene ID 101699683

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DDR1 ENSCPOG00000013417 (Guinea pig)

Gene Details

discoidin domain receptor tyrosine kinase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012079, Guinea pig)

Protein Percentage 94.86%
CDS Percentage 90.99%
Ka/Ks Ratio 0.05023 (Ka = 0.0244, Ks = 0.4861)

DDR1 ENSG00000204580 (Human)

Gene Details

discoidin domain receptor tyrosine kinase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000365759, Human)

Protein Percentage 94.52%
CDS Percentage 89.51%
Ka/Ks Ratio 0.05145 (Ka = 0.0281, Ks = 0.5467)

Ddr1 ENSMUSG00000003534 (Mouse)

Gene Details

discoidin domain receptor family, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112570, Mouse)

Protein Percentage 93.73%
CDS Percentage 87.57%
Ka/Ks Ratio 0.04787 (Ka = 0.033, Ks = 0.6904)

Ddr1 ENSRNOG00000000830 (Rat)

Gene Details

discoidin domain receptor tyrosine kinase 1 (Ddr1), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001102, Rat)

Protein Percentage 94.06%
CDS Percentage 87.02%
Ka/Ks Ratio 0.04132 (Ka = 0.0315, Ks = 0.7623)

Genome Location

Sequence Coding sequence

Length: 2745 bp    Location: 24894475..24881437   Strand: -
Raw sequence   
>XM_004847058.1
ATGGGGCCAGGGGCCCTCGGATCTCTACTGTCGCTGTTGCTGCTCTTGCTGGCAGATGGAGACGCCGACATGAAGGGACATTTTGACCCGGCCAAGTGCCGCTATGCGCTGGGCATGCAGGACCGGACCATTCCGGACAGCGACATCTCCGTCTCCAGCTCCTGGTCGGACTCCACTGCGGCCCGGCACAGCAGGCTGGAGAGCAGTGACGGGGATGGGGCCTGGTGTCCCGCGGGGCCTGTGTTCCCCAAGGAGGAGGAGTACCTGCAGGTGGATCTCCGGCAGCTGCACCTGGTGGCCCTAGTGGGCACTCAGGGACGCCACGCTGGCGGCCTGGGCAAGGAGTTCTCCCGCAGCTACCGGCTGCGCTACTCCCGGGACGGCCACCGCTGGATGGACTGGAAGGACCGCTGGGGTCAGGAGGTGATCTCAGGTAACGAGGACCCCGGGGGTGTGGTGTTGAAGGACCTTGGGCCCCCCATGGTAGCCCGACTGGTTCGCTTCTATCCCCGAGCCGACCGCATCATGAGTGTGTGTCTGCGGGTTGAGCTCTATGGCTGCCTCTGGAGGGACGGGCTCCTGTCCTACACAGCCCCCCTGGGGCAGACCATGTACTTATCCGAGGCAGTGCCTCTCAACGACTCCACCTACGATGGATTCACGGTCAGCGGGCTTCAGTACGGTGGTCTCGGCCAGCTGGCGGACGGCGTGGTAGGGCTGGACGACTTTAGGCAGAGCCAGGAGCTGCGGGTCTGGCCAGGGTATGACTACGTGGGATGGGACAACCACAGCTTCCCCAGCGGATACGTGGAGATGGAGTTCGAATTTGACCGGCTGAGGGCCTTCCAGGCCATGCAGGTCCACTGTAACAACATGCACACGCTGGGCGCCCGCCTGCCCGGCGGGGTGGAATGTCGATTCAAGCGGGGGCCTGCCATGGCCTGGGAGGGGGAGCCCGTGCGCCATGCTCTGGGGGGAAGCCTGGGCGACCCCAGAGCCCGGGCTGTCTCTGTGCCCCTGGGCGGCCGCCTGGGTCGATTTCTGCAGTGCCGCTTCCTCTTTGCGGGGCCCTGGCTACTCTTCAGCGAGATCTCCTTCATCTCCGATGTGGGGAACGACTCCTCTCCAGCTCCAGGGGGCACCTTCCCCCCAGCACCCTGGTGGCCGCCCGGCCCTCCTCCCACCAACGTCAGCAGCTTGGAGCTGGAGCCCCGCGGCCAGCAACCTGTGGCCAAGGCAGAGGGCAGCCCGACCGCCATCCTCATCGGCTGCCTGGTGGCCATCATCTTGCTGCTGCTGCTCATCATCGCGCTCATGCTCTGGCGGCTGCACTGGCGCAGGCTCCTCAGCAAGGCTGAGCGCCGGGTGCTGGAGGAGGAGCTGACGGTTCACCTCTCTGTCCCTGGGGACACCATCCTCATCAACAACCGCCCAGCCCCCCGGGAGCCACCCCCTTACCAAGAGCCCCGGCCGCGGGGAAACCCGCCCCACTCTGCGCCCTGCATCCCCAATGGCTCTGCGTTGCTGCTCTCCAATCCAGCCTACCGCCTCCTTCTGGCCACTTACGCCCGTCCCCCTCGAGGCCCGGGCCCCCCCACACCCGCCTGGGCCAAACCCACCAACACCCAGGCCTGCAGTGGGGACTACATGGAGCCTGAGAAGCCTGGTGCCCCGCTCCTGGCCCCTCCCCCCAACAGCGTCCCGCACTATGCCGAGGCTGACATTGTCACCCTGCAGGGCGTCACCGGGGGCAACACCTATGCTGTGCCTGCACTGCCCCAAGGGGCAGCTGGGGATGGGCCCCCCAGAGTGGACTTCCCTCGGTCGCGGCTCCGCTTCAAGGAGAAGCTTGGCGAGGGCCAGTTTGGGGAGGTGCACCTGTGTGAGGTAGAGAACCCTCAAGATCTGGCCAGTCTTGACTTCCCCGTCAGCGTGCGCAAGGGACAACCCTTGCTGGTAGCTGTCAAGATCCTACGGCCTGATGCCACCAAGAACGCCAGGAACGACTTCCTGAAGGAGGTGAAGATCATGTCTCGACTCAAGGATCCAAACATCATCCGGCTCCTGGGCGTGTGTGTGCAGGACGACCCCCTCTGCATGATCACTGATTACATGGAGAACGGTGACCTGAACCAGTTCCTCAGTGCCCATCAGCTGGAGGACAAGGTGGCTGAGGTGGCCCCTGGGGACCAGGAGGCTGTGCAGGGGCCCACGATCAGCTACCCGATTCTCCTGCACGTGGCCGCCCAGATTGCCTCAGGCATGCGCTACCTTGCCACACTCAACTTTGTGCACCGGGATCTGGCCACACGGAACTGCTTGGTCGGGGAGAATTTCACCATCAAAATCGCTGACTTTGGCATGAGCCGGAACCTCTATGCTGGGGATTACTACCGTGTGCAGGGCCGGGCGGTGCTTCCCATCCGGTGGATGGCCTGGGAGTGCATCCTTATGGGCAAGTTCACGACGGCGAGCGACGTGTGGGCATTTGGGGTGACTCTGTGGGAGGTGCTGATGCTCTGCAGGGCCCAGCCCTTTGGGCAGCTCACAGATGAGCAAGTCATCGAGAACGCCGGGGAGTTCTTCCGGGACCAGGGCCGGCAGGTTTACCTGTCGCGGCCGCCCGCCTGCCCCCAGGGCCTGTATGAATTGATGCTGCAGTGCTGGAGCCGGGAGCCCGAGCAACGACCACCCTTTGCCCAGCTGCACCGGTTCTTGGCAGAGGATGCACTCAACACAGTGTGA

Related Sequences

XP_004847115.1 Protein

Ddr1 PREDICTED: epithelial discoidin domain-containing receptor 1 isoform X1 [Heterocephalus glaber]

Length: 914 aa      View alignments
>XP_004847115.1
MGPGALGSLLSLLLLLLADGDADMKGHFDPAKCRYALGMQDRTIPDSDISVSSSWSDSTAARHSRLESSDGDGAWCPAGPVFPKEEEYLQVDLRQLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDGHRWMDWKDRWGQEVISGNEDPGGVVLKDLGPPMVARLVRFYPRADRIMSVCLRVELYGCLWRDGLLSYTAPLGQTMYLSEAVPLNDSTYDGFTVSGLQYGGLGQLADGVVGLDDFRQSQELRVWPGYDYVGWDNHSFPSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGGVECRFKRGPAMAWEGEPVRHALGGSLGDPRARAVSVPLGGRLGRFLQCRFLFAGPWLLFSEISFISDVGNDSSPAPGGTFPPAPWWPPGPPPTNVSSLELEPRGQQPVAKAEGSPTAILIGCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINNRPAPREPPPYQEPRPRGNPPHSAPCIPNGSALLLSNPAYRLLLATYARPPRGPGPPTPAWAKPTNTQACSGDYMEPEKPGAPLLAPPPNSVPHYAEADIVTLQGVTGGNTYAVPALPQGAAGDGPPRVDFPRSRLRFKEKLGEGQFGEVHLCEVENPQDLASLDFPVSVRKGQPLLVAVKILRPDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDKVAEVAPGDQEAVQGPTISYPILLHVAAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQGLYELMLQCWSREPEQRPPFAQLHRFLAEDALNTV