Details from NCBI annotation

Gene Symbol Ltb
Gene Name lymphotoxin beta (TNF superfamily, member 3), transcript variant X6
Entrez Gene ID 101716941

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LTB ENSCPOG00000023062 (Guinea pig)

Gene Details

lymphotoxin beta (TNF superfamily, member 3)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016316, Guinea pig)

Protein Percentage 80.56%
CDS Percentage 86.27%
Ka/Ks Ratio 0.25317 (Ka = 0.1064, Ks = 0.4201)

LTB ENSG00000227507 (Human)

Gene Details

lymphotoxin beta (TNF superfamily, member 3)

External Links

Gene Match (Ensembl Protein ID: ENSP00000410481, Human)

Protein Percentage 75.41%
CDS Percentage 81.97%
Ka/Ks Ratio 0.24656 (Ka = 0.1406, Ks = 0.5702)

Ltb ENSMUSG00000024399 (Mouse)

Gene Details

lymphotoxin B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025262, Mouse)

Protein Percentage 74.17%
CDS Percentage 77.78%
Ka/Ks Ratio 0.16734 (Ka = 0.1634, Ks = 0.9765)

Ltb ENSRNOG00000000836 (Rat)

Gene Details

lymphotoxin beta (TNF superfamily, member 3) (Ltb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001108, Rat)

Protein Percentage 72.92%
CDS Percentage 77.22%
Ka/Ks Ratio 0.16688 (Ka = 0.1772, Ks = 1.0616)

Genome Location

Sequence Coding sequence

Length: 735 bp    Location: 24618004..24620448   Strand: +
>XM_004847016.1
ATGGGGGCGCTGGGGCTGCAGGGCCCGAGTGGGAGGCCCCAGGTGAGGGGCTGCTTCCTGCTGGCTGTGGCAGGGGCCACTTCGCTGGTGACCCTGCTGCTGGCCGTGCCCCTCACGGTCCTGGCAGTGCTGGCCTTGGTGCCGCAGGATCGGGGAGGATCGGTGACGGAGACCCCCGGCCCAGGAGCACAGCCCCAGCAAGGACTGGGGTTTCGGGAGCTGCCGGGGGAGGCGCCAGAAACAGATCTCAGCCGCCCGCTCCCGGCTGCCCACCTCATAGGCGCCTGGACGAAGGGCCAGGGGCTGGGCTGGGAGGCGCACCAGGAGGAGGCGTTCCTGCGGAGCGGGACGCGGTTCTCGCGCGCCGAGGGCCTGGCGCCGCCGCGGGACGGGCTCTATTTCCTCTACTGCCACGTGGGCTACCGCGGCCGCGCGCCCCCTGCCGGCCGGGCCGCGCCGAGCCGGGCGCTCACGCTGCGCAGCGCGCTGCTCCGGGCGGGCGGCGCCTACGGCCCGGGGGCGCCCGAGCTGCTGCTGGAGGCCGCGGAGACCGTGAGCCCGGGCGCCGAGCGCGCCGGGAGGCCAGAGCCCGGGCCGCTGTGGTACGCGAGCGTGGGCCTCGGCGGCCTGGTGCAGCTCCGGCGCGGCGAGCGGGTGTACGTGAACATCAGCCACCCCGAGCTGGTGGACTACCGGCGGGGCAAGACCTTCTTCGGGGCCGTGATGATGGGGTGA

Related Sequences

XP_004847073.1 Protein

Ltb PREDICTED: lymphotoxin-beta isoform X6 [Heterocephalus glaber]

Length: 244 aa      View alignments
>XP_004847073.1
MGALGLQGPSGRPQVRGCFLLAVAGATSLVTLLLAVPLTVLAVLALVPQDRGGSVTETPGPGAQPQQGLGFRELPGEAPETDLSRPLPAAHLIGAWTKGQGLGWEAHQEEAFLRSGTRFSRAEGLAPPRDGLYFLYCHVGYRGRAPPAGRAAPSRALTLRSALLRAGGAYGPGAPELLLEAAETVSPGAERAGRPEPGPLWYASVGLGGLVQLRRGERVYVNISHPELVDYRRGKTFFGAVMMG