Details from NCBI annotation

Gene Symbol Msh5
Gene Name mutS homolog 5 (E. coli), transcript variant X2
Entrez Gene ID 101702743

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000000868 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000781, Guinea pig)

Protein Percentage 86.0%
CDS Percentage 86.44%
Ka/Ks Ratio 0.21844 (Ka = 0.0868, Ks = 0.3974)

Msh5 ENSMUSG00000007035 (Mouse)

Gene Details

mutS homolog 5 (E. coli)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000007250, Mouse)

Protein Percentage 85.11%
CDS Percentage 83.39%
Ka/Ks Ratio 0.15767 (Ka = 0.0925, Ks = 0.5865)

Msh5 ENSRNOG00000000857 (Rat)

Gene Details

mutS homolog 5 (E. coli) (Msh5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000057489, Rat)

Protein Percentage 85.2%
CDS Percentage 83.15%
Ka/Ks Ratio 0.14596 (Ka = 0.092, Ks = 0.6303)

Genome Location

Sequence Coding sequence

Length: 2535 bp    Location: 24477929..24453750   Strand: -
>XM_004846965.1
ATGCCACGGCCCGCTCTCCGACCACACCCATGGCGAGACAGACAGGGCGTCTCTCGGGTCTGCAAACTTGGCCTAGCAGACCAACCCAGCTTCCCTCCTCTGACCCCTCTCCCTTCCTGTCCCCAGGGCGGCGACTGCTCTCCTCTCCTCTCCGCGTCTCCCCCTCCGCTGCCCGAGGTCCATCTGTGTGTGCTGTGGAATTCAGGACACCTGGGCATTGCCTACTATGACACCAGTGACTCAGCCATCCACTTCATGCCGGATGCCCCAGACCAGGAGAGCCTCAAGCTTCTGCAGAGAGTTTTGGATGAAATCAATCCCCGGTCTCTTGTTACAAGTGCCAAACAGGATGAGAATATGACTCACTTTCTAGGAAAGCTTGCCTCCCAGGAACACAGAGAGCCAAAGAAACCTGAAATCATATTATTGCCAAGTGTGGATTTTGGTCTGGAGATAAGCAAACAGCGCCTCCTTTCTGGAAACTACTCCTTCATCCCAGAGTCTATGACAGCCACTGAGAAAATCCTCTTCCTCTCCTCCATCATTCCCTTCAACTGCCTCCTCACAGTTCGGGCACTTGGAGGACTCCTCAAGTTCCTGGGTCGAAGAAGAGTTGGGGTTGAACTGGAAGACTATAATGTCAGCGTCCCTATCCTGGGCTTTAAGAAATTTGTGTTGACTCATCTTGTGAGCATAGATCAAGAAACTTACAGTGTTCTGCAGATTTTTAAGAGCGAGTCTCATCCTTCAGTGTACAAAGTGGCCAGTGGACTGAAGGAGGGGCTCAGCCTCTTTGGAATCCTCAACAGATGCCGCTGTAAGTGGGGAGAGAAGCTGCTTAGGCTATGGTTTACGCGTCCCACTCAGGACCTGGAGGAACTCAGTTCCCGTCTGGATGTCATTGAATTTTTTCTGCTGCCCCAAAATCTGGACATAGCTCAGATGCTGCATCGGCTTATGAGTCACATCAAGAACGTGCCCCTAATTTTGAAACGCATGAAGTTGTCCCATACCAAGGTCAGCGACTGGCAGGTTCTCTATAAGACTGTGTACAGTGCCCTGGGCCTGAGGGACGCCTGCCGCTCCCTGCCCCAGTCCATCCGGCTCTTTCGGGACATTGCCCAGGAGTTCTCCGATGACTTGCACCACATTGCCAGCCTCATTGGGAAAGTGGTGGACTTTGAGGGCAGCCTTGCTGAGAATCGCTTCACCGTCCTCCCCAACATTGATCCTGAAATTGATGAGAAAAAACGAAGACTGACGGGTCTCCCCAGCTTCCTCACTGAAGTTGCTCGGAAGGAGCTGGAGAATCTGGACTCTCGTGTTCCTTCATGCAGTGTCATCTACATCCCTCTGATTGGCTTCCTTCTTTCTATTCCCCGTCTGCCCTTCATGGTGGAGGCCAGTGACTTCGAGATTGAGGGACTGGACTTCATGTTTCTCTCAGAGGAGAAGCTGCACTATCGAAGCACTCGGACCAAGGAGCTGGATGCATTGCTGGGAGACCTGCACTGTGAGATCCGGGACCAGGAGACCCTGTTGATGCACCAGCTGCAGTGCCAGGTGCTGGCAAGGGCAGCTGTCTTGGCCCGAGTGTTGGACCTGGCCTCCCGACTGGACGTCCTGCTGGCTCTCGCCAGCGCTGCCCGGGACTATGGCTACTCTAGGCCCTGTTACTGTCCCCGACTCCATGGGGTGCGAATCCAGAACGGGAGACACCCTCTCATGGAGCTGTGCGCCCGAACCTTTGTGCCCAACTCTGCAGAATGCAGTGGGGACACAGGGAGAGTCAAAATCATCACCGGACCCAACTCCTCAGGGAAGAGTATTTATCTCAAGCAGGTGGGCTTGATCACATTCATGGCCCTGGTGGGCAGCTTTGTGCCAGCGGAACAGGCCGAAATCGGAGCAGTAGATGCCATCTTCACCCGAATCCACAGCTGCGAGTCCATCTCTCTGGGCCTCTCCACCTTCATGATCGACCTCAACCAGGTGGCGAAAGCAGTGAATAATGCCACCAAGCAGTCCCTGGTCCTAATTGACGAATTTGGAAAGGGAACCAACACGCTGGACGGGCTCTCGCTTCTGGCTGCCGTGATCCGACACTGGCTGGCACTCGGACCCACGTGCCCCCACATCTTTGTGGCCACCAACTTCCTAAGCCTCGTTCAGCTACAGCTGCTGCCACAAGGGCCTCTGGTGCAGTATCTGACCATGGAGACCTGTGAGGAGGGGGACGACCTTGTCTTCTTCTATCAGGTTTGCGAAGGTGTCGCCTGTGCCAGCCATGCCTCCCACACAGCTACCCAGGCTGGGCTTCCTGACAAACTCGTTGCCCGTGCCAAAGAGGTTTCGGACTTAGTCCGCAGTGGAAAACCCATCAAACCTGTCAAGGAGCTGCAGAAGCAGAACCAAATGGAAAAGTGTCAAATACTGGTGGATAGGTTTCTGCAGCTGGATTTGGAAGATCCCAGCCTGGACTTGGATATTTTCATGAGTCAGGAAGTGCTGCCTGCTGCCACCACCATCCCCTGA

Related Sequences

XP_004847022.1 Protein

Msh5 PREDICTED: mutS protein homolog 5 isoform X2 [Heterocephalus glaber]

Length: 844 aa     
>XP_004847022.1
MPRPALRPHPWRDRQGVSRVCKLGLADQPSFPPLTPLPSCPQGGDCSPLLSASPPPLPEVHLCVLWNSGHLGIAYYDTSDSAIHFMPDAPDQESLKLLQRVLDEINPRSLVTSAKQDENMTHFLGKLASQEHREPKKPEIILLPSVDFGLEISKQRLLSGNYSFIPESMTATEKILFLSSIIPFNCLLTVRALGGLLKFLGRRRVGVELEDYNVSVPILGFKKFVLTHLVSIDQETYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTQDLEELSSRLDVIEFFLLPQNLDIAQMLHRLMSHIKNVPLILKRMKLSHTKVSDWQVLYKTVYSALGLRDACRSLPQSIRLFRDIAQEFSDDLHHIASLIGKVVDFEGSLAENRFTVLPNIDPEIDEKKRRLTGLPSFLTEVARKELENLDSRVPSCSVIYIPLIGFLLSIPRLPFMVEASDFEIEGLDFMFLSEEKLHYRSTRTKELDALLGDLHCEIRDQETLLMHQLQCQVLARAAVLARVLDLASRLDVLLALASAARDYGYSRPCYCPRLHGVRIQNGRHPLMELCARTFVPNSAECSGDTGRVKIITGPNSSGKSIYLKQVGLITFMALVGSFVPAEQAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATKQSLVLIDEFGKGTNTLDGLSLLAAVIRHWLALGPTCPHIFVATNFLSLVQLQLLPQGPLVQYLTMETCEEGDDLVFFYQVCEGVACASHASHTATQAGLPDKLVARAKEVSDLVRSGKPIKPVKELQKQNQMEKCQILVDRFLQLDLEDPSLDLDIFMSQEVLPAATTIP