Details from NCBI annotation

Gene Symbol Lsm2
Gene Name LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Entrez Gene ID 101700991

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LSM2 ENSCPOG00000021053 (Guinea pig)

Gene Details

LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015954, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 93.97%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.3832)

LSM2 ENSG00000204392 (Human)

Gene Details

LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000364813, Human)

Protein Percentage 100.0%
CDS Percentage 91.58%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.4928)

Lsm2 ENSMUSG00000007050 (Mouse)

Gene Details

LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000007266, Mouse)

Protein Percentage 98.95%
CDS Percentage 90.88%
Ka/Ks Ratio 0.00817 (Ka = 0.0046, Ks = 0.5681)

LSM2 ENSRNOG00000048725 (Rat)

Gene Details

LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm2), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065463, Rat)

Protein Percentage 98.95%
CDS Percentage 90.53%
Ka/Ks Ratio 0.00783 (Ka = 0.0047, Ks = 0.5953)

Genome Location

Sequence Coding sequence

Length: 288 bp    Location: 24425463..24429916   Strand: +
>XM_004846958.1
ATGCTCTTCTACTCCTTTTTCAAGTCCCTTGTGGGCAAGGATGTGGTCGTGGAGCTCAAGAATGACCTGAGCATCTGTGGAACCCTCCATTCTGTGGACCAGTATCTCAACATTAAACTAACGGACATCAGTGTCACAGACCCCGAGAAGTACCCTCACATGCTGTCTGTGAAGAACTGCTTCATCCGGGGCTCTGTGGTCCGCTACGTGCAGCTGCCCGCAGACGAGGTGGACACACAGCTGCTGCAGGACGCAGCGAGGAAGGAAGCCCTGCAGCAGAAGCAGTGA

Related Sequences

XP_004847015.1 Protein

Lsm2 PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Heterocephalus glaber]

Length: 95 aa      View alignments
>XP_004847015.1
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ