Sequence details NCBI ID: XM_004846857.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psmb9
Gene Name proteasome (prosome, macropain) subunit, beta type, 9, transcript variant X2
Entrez Gene ID 101701705

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMB9 ENSCPOG00000002121 (Guinea pig)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 9

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001920, Guinea pig)

Protein Percentage 83.56%
CDS Percentage 87.67%
Ka/Ks Ratio 0.2586 (Ka = 0.084, Ks = 0.3247)

PSMB9 ENSG00000240065 (Human)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 9

External Links

Gene Match (Ensembl Protein ID: ENSP00000363993, Human)

Protein Percentage 85.84%
CDS Percentage 85.39%
Ka/Ks Ratio 0.16003 (Ka = 0.0763, Ks = 0.4767)

Psmb9 ENSMUSG00000096727 (Mouse)

Gene Details

proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000133499, Mouse)

Protein Percentage 81.74%
CDS Percentage 82.65%
Ka/Ks Ratio 0.16239 (Ka = 0.0999, Ks = 0.6153)

Psmb9 ENSRNOG00000000459 (Rat)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 9 (Psmb9), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000532, Rat)

Protein Percentage 82.19%
CDS Percentage 82.19%
Ka/Ks Ratio 0.15197 (Ka = 0.101, Ks = 0.6644)

Genome Location

Sequence Coding sequence

Length: 660 bp    Location: 23815421..23811008   Strand: -
Raw sequence   
>XM_004846857.1
ATGCTGCGGCCGGGGGCGCACGCCCGGGACCTATCCCGGGCCGCAGGAGTCCACACCGGGACCACCATCATGGCAGTGGAGTTTGACGGAGGAGTCGTGGTGGGTTCAGACTCCCGGGTGTCGGCAGGACAGTCGGTGGTGAACCGAGTGTTTGACAAGCTGTCCCCGCTAAACGAGCGCATCTACTGTGCCCTCTCTGGTTCGGCTGCTGATGCCCAGGCCGTGGTGGACATGGCCGCCTACCAGCTGGAGCTGCATGGGTTGGAACTGGAAGCGCCACCCCTTGTTCTGGCTGCAGCGAACCTGGTGAAGAACATTACCTACAAATACCGGGAGGAGTTATTGGCACATCTCATTATAGCTGGCTGGGACCAACGTGAAGGGGGCCAGGTCTACGGCACGCTGGGAGGGATGCTGACTCGACAGCCCCTCATCATCAGCGGCTCTGGCAGCACCTACATCTATGGTTATGTGGACGCAGCGTACAAAGCAGGCATGTCCCCCGAGGAGTGCAGGCGCTTCACCACAGACGCTATCGCTCTGGCCATCAGCCGGGACGGCGCCAGTGGGGGTGTCGTCTACCTGGTCACTATCACGGCTGCTGGTGTGGACCATCGAATAGTCTTGGGGAATGAGCTGCCAAAATTCTATGATGAGTGA

Related Sequences

XP_004846914.1 Protein

Psmb9 PREDICTED: proteasome subunit beta type-9 isoform X2 [Heterocephalus glaber]

Length: 219 aa      View alignments
>XP_004846914.1
MLRPGAHARDLSRAAGVHTGTTIMAVEFDGGVVVGSDSRVSAGQSVVNRVFDKLSPLNERIYCALSGSAADAQAVVDMAAYQLELHGLELEAPPLVLAAANLVKNITYKYREELLAHLIIAGWDQREGGQVYGTLGGMLTRQPLIISGSGSTYIYGYVDAAYKAGMSPEECRRFTTDAIALAISRDGASGGVVYLVTITAAGVDHRIVLGNELPKFYDE