Sequence details NCBI ID: XM_004846840.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Col11a2
Gene Name collagen, type XI, alpha 2, transcript variant X4
Entrez Gene ID 101726497

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 4890 bp    Location: 23614570..23640489   Strand: +
Raw sequence   
>XM_004846840.1
ATGGAGCGGGGCAGCCACTGCCGCCGCCTCCTCCTGCTCCTCCCGCTGGCGCTGGGGCTGAGCGGCGCCCCGGGCCGGGCAGGTGCGCCCCCTGTGGACCTGCTCCGGGCCCTGCGGTTCCCCTCCCTCCCTGATGGAGTCCGGAGGGCGAGAGGCGTCTGTCCAGCTGATGTGGCCTACCGAGTGTCTCGGCCTGCCCAGCTCAGCGCACCTACCCGCCAGCTCTTCCCGGGAGGCTTTCCCAAAGACTTCTCTCTGCTGACTGTTGTCCGGACCCGGCCTGGCCTCCAGGTGCCCCTCCTGACTCTCTACAGTGACCAGGGTGTCCAGCAGCTGGGCCTGGAGCTTGGCCGACCAGTCCGCTTCCTGTATGAGGACCAGACCGGACGGCCCCAGCCCCCGGCTCAGCCGGTCTTCTGGGGCCTCAGCCTTGCGGACGGCAAGTGGCACCGGGTGGCCGTGGCTGTGAAGGGGCAATCTGTCACCCTCATCGTTGACTGCAAGAAGCGAGTCACCCGGCCCCTTCCCCGAAGCGCTCGCCCGGTGTTGGACACCCGAGGGGTGGTCATCTTCGGGGCCCGTGTCCTCGATGAAGAAGTCTTTGAGGGCGATGTGCAGAAGCTTGTCGTTGTTCCTGGAGTCCAAGCTGCCTATGAGTCCTGTGAACAGAAGGATCTGGAATGTGAGGGCAGCCAGCGGGAGAGACCTCGGAACAAACAGTCGCACAGAGCCCAGAGATCGCCAAAGCAGCCACCGTCAAGGCTTCACAGACCGCAAAACCAGGAACCCCAGCGACAGGTTGCCCGTGGACCCCGGGGGCTGAAGGGAGAGAAGGGAGAGCCTGCCGTGCTGGAACCTGGCATGCTCGTGGAGGGACCCCCTGGCCCAGAAGGCCCTGCGGGATTGACTGGTCCCCCTGGTATCCAGGGGAACCCAGGCCCAGTTGGAGACCCTGGAGAGAGGGGACCCCCTGGCCGAGCAGGGCTCCCTGGATCTGATGGTGCCCCTGGCCCTCCTGGCACCTCCCTCATGCTCCCATTCCGGTTTGGCAGCAGTGGGGGTGACAAGGGCCCTGTGCTGGCGGCCCAGGAGGCACAGGCCCAGGCAATCCTGCAGCAGGCACGGCTGGCGCTCCGTGGACCCCCTGGCCCGATGGGATACACAGGCCGCCCTGGGCCCTTGGGACAGCCCGGGAGCCCTGGCTTGAAAGGAGAGCTGGGAGACCTAGGGCCCCAGGGCCCCAGAGGACCTCAGGGACTCTCAGGGCCCCCCGGCAAGGCTGGACGGAGGGGCCGAGCGGGTGCTGACGGAGCCCGAGGGATGCCGGGAGAACCTGGGGTGAAGGGTGATCGAGGTTTTGACGGCCTCCCAGGGCTACCTGGGGAGAAGGGGCACAGGGGTGACACTGGCGCCCAGGGCCTTCCTGGGCCCCCTGGAGAGGATGGAGAGCAGGGAGATGATGGGGAGACCGGGCCCCGGGGGCTGCCTGGAGAGTCGGGACCTCGAGGGCTCCTTGGTCCCAAAGGCCCCCCTGGAATTCCTGGGTCCCCGGGAGTCCGAGGCTTGGACGGGCCACACGGGCCCAAAGGCAGCTTGGGACCCCAGGGAGAGCCAGGACCTCCCGGACAGCAGGGCACCCCTGGGACCCAGGGTCTCCCTGGGCCTCAGGGTGCCGTTGGCCCTCGTGGTGAGAAGGGGCCTCAAGGGAAGGCAGGGCTCCCCGGCATGCCTGGCTCAGACGGACTCCCGGGTCATCCCGGGAAGGAAGGTCCTCCTGGAACCAAAGGAAACCAGGGCCCGTCTGGACCTCAGGGTCCTTTAGGATACCCCGGACCTCGAGGTGTCAAGGGTGTGGATGGAATTCGGGGTCTGAAGGGTCACAAAGGTGAAAAGGGCGAGGATGGTTTTTCCGGGTTCAAAGGTGACGTGGGCGTGAAAGGTGACAGGGGTGAGGTCGGAGTTCCTGGCTCCCGGGGAGAAGATGGCCCCGAGGGGCCGAAGGGACGCACGGGACCCACTGGAGACCCTGGGCCCCCTGGACTCATGGGCGAGAAGGGCAAGCTGGGTGTCCCTGGCCTGCCTGGCTACCCTGGACGCCAGGGTCCCAAGGGCTCCCTGGGGTTTCCTGGCTTCCCTGGAGCCAGTGGAGAGAAGGGAGCCCGGGGCCTGTCAGGGAAAGCAGGACCTCGCGGGGAACGAGGGCCCACGGGCCCGCGGGGCCAGCGGGGACCCCGAGGAGCCACTGGCAAGTCTGGAGCTAAGGGAACCTCAGGAGGTGATGGCCCCCACGGGCCCCCCGGAGAGAGGGGCCTCCCTGGACCTCAGGGCCCCAGTGGCTTCCCTGGCCCCAAAGGCCCCCCGGGCCCCCCGGGGAAGGATGGGCTGCCCGGGCACCCAGGCCAGAGAGGAGAAGTGGGCTTCCAAGGGAAGACAGGCCCTCCTGGGCCCCCTGGAGTGGTGGGACCCCAGGGAGCAGCAGGGGAGAGTGGTCCCATGGGGGAGAGAGGTCACCCAGGGCCCCCGGGACCTCCCGGAGAGCAGGGCCTGCCTGGCCCGGCTGGAAAAGAAGGCACAAAGGGTGACCCTGGTCCCCCCGGGGCTCCGGGGAAAGATGGCCCTGCTGGTCTGAGGGGCTTCCCAGGGGAGAGAGGCCTCCCGGGCACTGCTGGTGGGGCTGGTTTGAAGGGGAATGAAGGTCCAGCTGGCCCTCCCGGCCCCGCAGGCTCCCCCGGGGAGCGAGGTGGAGCAGGATCAGGGGGGCCCATCGGTCCCCCAGGGCGCCCAGGCCCCCAGGGTCCCCCAGGAGCAGCGGGTGAGAAAGGCGTCCCGGGGGAGAAGGGCCCTGTTGGTCCCACCGGCCGCGATGGGGTGCAGGGTCCTGTGGGACTTCCTGGCCCTGCTGGACCCCCTGGTGTGGCGGGAGACGATGGTGACAAGGGTGAGGTGGGAGACCCCGGACAGAAGGGCTCCAAGGGGAACAAGGGTGAACACGGCCCTCCTGGCCCTCCTGGCCCCATCGGTCCTGTGGGGCAGCCCGGAGCCGCGGGAGCTGATGGGGAGCCTGGAGCTAGGGGGCCCCAGGGACACTTTGGAGCCAAAGGTGATGAAGGGACAAGAGGATTCAACGGACCCCCAGGACCCATTGGCCTACAGGGCTTGCCAGGCCCCTCTGGGGAGAAAGGAGAAACAGGAGATGTGGGGCCTATGGGACCCCCCGGCCCCCCAGGACCTCGAGGCCCAGCTGGACCCAACGGTGCTGATGGACCCCAAGGCCCCCCCGGAGGTGTTGGCAACCTCGGTCCCCCTGGAGAGAAGGGGGAGCCAGGAGAAGCAGGATCCCCAGGGGTCCAGGGTGAGCCAGGCGTCAAGGGTCTTCGAGGGGAGCGTGGGGAGAAAGGAGAGACAGGGCAGGCGGGAGAGGCTGGGCCACCCGGCCCCAAAGGGCCCGCAGGCGGCGATGGCCCCAAGGGCAGCCCTGGTCCCGTGGGTTTCCCTGGCGACCCCGGCCCCCCTGGAGAAGTCGGCCCTCGGGGCCAGGATGGTGCCAAGGGTGACCGAGGAGAGGACGGCGAGCCAGGCCAGCCCGGCTCCCCTGGTCCCACTGGGGAGAATGGGCCACCTGGACCCCTTGGGAAGCGAGGTCCTGCCGGCACGCCTGGTCCGGAGGGGCGACAGGGAGAGAAGGGAGCCAAGGGGGATCCTGGTGCAGTGGGTGCCCCGGGGAAGACAGGCCCTGTGGGTCCTGCTGGTCCGGCAGGAAAACCCGGCCCTGATGGGCTACGAGGGCTCCCGGGCTCGGTGGGTCAGCAGGGCCGTCCTGGAGCCACAGGCCAGGCTGGGCCCCCGGGTCCTGTGGGACCCCCAGGGCTTCCTGGCCTCCGGGGTGATGCTGGAGCCAAGGGGGAGAAGGGCCACCCAGGTCTCATTGGACTGATTGGCCCCCCTGGAGAGCAAGGGGAGAAGGGTGACCGGGGACTGCCCGGCCCTCAGGGCTCCCCTGGACAGAAGGGAGAGACGGGTGTCACAGGAGCGTCCGGCCCCGTCGGTCCCGGAGGGCCTCCCGGCCTCCCCGGACCTGCTGGCCCCAAAGGAGCCAAAGGAGCCACAGGCCCAGCCGGACCCAAGGGAGAGAAGGGCGCGCAGGGCCCCCCAGGACACCCGGGCCCTCCGGGCGAGGTGATCCAGCCACTGCCCATCCAGATGCCCAAGAAGGTGCGCCGCTCAGTGGACGGCAGCCGCCTGATGCAGGAGGACGAGGCCCTGCCGAGCGGGGGCGCCCCGGGCAGTCCCGGGGGGCTGGAGGAGATCTTCGGCTCGCTGGACTCCCTGCGGGAGGAGATCGAGCAGATGAGGCGGCCGACAGGGACCCAGGCCAGCCCGGCGCGCACCTGCCAGGACCTGAAGCTGTGTCGCCCGGAGCTGCCTGATGGAGAGTACTGGGTGGACCCCAATCAGGGCTGTCCCCGGGATGCCTTCCGGGTCTTCTGCAACTTTACCGCGGGCGGGGAGACGTGTGTGACACCCAGGGATGATGTCACCCAGTTCTCCTACGTGGACTCAGAGGGCTCCCCGGTAGGTGTGGTCCAGCTCACCTTCCTGCGCCTGCTCAGTGTCTCGGCCCACCAGGACGTCTCCTACCCCTGCTCTAAAGCGCCCCTCGACAGCCCCCTGAGACTCCGGGGGGCCAATGAGGATGAGCTGAGCCCCGGGACCAGCCCCTATGTCAAGGAATTCAGAGACGGCTGTCAGACACAGCATGGCCGCAGGGTGCTGGAGGTCCGCACCCCGGTGCTGGAGCAGCTGCCGGTGCTGGATGCCTCCTTCTCAGACCTGGGGGCCCCCCCGAGGCGGGGAGGGGTGCTGCTGGGCCCAGTCTGCTTCATGGGCTAG

Related Sequences

XP_004846897.1 Protein

Col11a2 PREDICTED: collagen alpha-2(XI) chain isoform X4 [Heterocephalus glaber]

Length: 1629 aa      
>XP_004846897.1
MERGSHCRRLLLLLPLALGLSGAPGRAGAPPVDLLRALRFPSLPDGVRRARGVCPADVAYRVSRPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQVPLLTLYSDQGVQQLGLELGRPVRFLYEDQTGRPQPPAQPVFWGLSLADGKWHRVAVAVKGQSVTLIVDCKKRVTRPLPRSARPVLDTRGVVIFGARVLDEEVFEGDVQKLVVVPGVQAAYESCEQKDLECEGSQRERPRNKQSHRAQRSPKQPPSRLHRPQNQEPQRQVARGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLTGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSSGGDKGPVLAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGELGDLGPQGPRGPQGLSGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGEQGDDGETGPRGLPGESGPRGLLGPKGPPGIPGSPGVRGLDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAVGPRGEKGPQGKAGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFSGFKGDVGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKAGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPSGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGESGPMGERGHPGPPGPPGEQGLPGPAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGAGLKGNEGPAGPPGPAGSPGERGGAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPVGPTGRDGVQGPVGLPGPAGPPGVAGDDGDKGEVGDPGQKGSKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGEAGSPGVQGEPGVKGLRGERGEKGETGQAGEAGPPGPKGPAGGDGPKGSPGPVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGETGVTGASGPVGPGGPPGLPGPAGPKGAKGATGPAGPKGEKGAQGPPGHPGPPGEVIQPLPIQMPKKVRRSVDGSRLMQEDEALPSGGAPGSPGGLEEIFGSLDSLREEIEQMRRPTGTQASPARTCQDLKLCRPELPDGEYWVDPNQGCPRDAFRVFCNFTAGGETCVTPRDDVTQFSYVDSEGSPVGVVQLTFLRLLSVSAHQDVSYPCSKAPLDSPLRLRGANEDELSPGTSPYVKEFRDGCQTQHGRRVLEVRTPVLEQLPVLDASFSDLGAPPRRGGVLLGPVCFMG