Sequence details NCBI ID: XM_004846837.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Col11a2
Gene Name collagen, type XI, alpha 2, transcript variant X1
Entrez Gene ID 101726497

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 5490 bp    Location: 23615933..23640489   Strand: +
Raw sequence   
>XM_004846837.1
ATGGCTTCGGCCTCTGCCCTGCCGCACACTTCTGTGCGCGTTTTGCTGGAACTCGCTTTGGGACTTTTCCAGCCTGGAGCTGATGGTGTGAGAAACCTTAACCCAGGGAGAGGTGCGCCCCCTGTGGACCTGCTCCGGGCCCTGCGGTTCCCCTCCCTCCCTGATGGAGTCCGGAGGGCGAGAGGCGTCTGTCCAGCTGATGTGGCCTACCGAGTGTCTCGGCCTGCCCAGCTCAGCGCACCTACCCGCCAGCTCTTCCCGGGAGGCTTTCCCAAAGACTTCTCTCTGCTGACTGTTGTCCGGACCCGGCCTGGCCTCCAGGTGCCCCTCCTGACTCTCTACAGTGACCAGGGTGTCCAGCAGCTGGGCCTGGAGCTTGGCCGACCAGTCCGCTTCCTGTATGAGGACCAGACCGGACGGCCCCAGCCCCCGGCTCAGCCGGTCTTCTGGGGCCTCAGCCTTGCGGACGGCAAGTGGCACCGGGTGGCCGTGGCTGTGAAGGGGCAATCTGTCACCCTCATCGTTGACTGCAAGAAGCGAGTCACCCGGCCCCTTCCCCGAAGCGCTCGCCCGGTGTTGGACACCCGAGGGGTGGTCATCTTCGGGGCCCGTGTCCTCGATGAAGAAGTCTTTGAGGGCGATGTGCAGAAGCTTGTCGTTGTTCCTGGAGTCCAAGCTGCCTATGAGTCCTGTGAACAGAAGGATCTGGAATGTGAGGGCAGCCAGCGGGAGAGACCTCGGAACAAACAGTCGCACAGAGCCCAGAGATCGCCAAAGCAGCCACCGTCAAGGCTTCACAGACCGCAAAACCAGGAACCCCAGCGACAGCCCCCCGAGCCTCTCCACCTCGACTACGAGCCTCCCTACGACGCCGAGAAGACCAGGGGCACCGCCCCTGACGGTCAGCGGCCTCAGAGCCCCAACCGCAGGGCTCCCCCTTCCCCTAGGGGGCGTCGGACCCCTCCCCGAAAGCCTAACCCACCTGCCAAGAGGTCCGCGGCCCGGCAGGCGCCCCCCTCAGCGGGCCGGAAGCCCCCTGGAGCTGGAGGCTCTGGGTCAGCACAGAGCCAGCCTCCCCCCTCCAGACCAGCCCGGCAGGCAGCTCCCCCCACTGCCCGGGCCCCCCCCAGGACCAGAGGCAGCGGCTACCGGCAGTACCCCACCCCTGGTGAAGAGGAAGGAGCCCCGGAGTCAAGCCCCTTGCCGCTCCCGGAGGAGGAGCGGACAGATCTCCAGGTCCCCCCAACAGCCGAAGGGTTCCTGGCAGAGGAACATGGGGAGGGTGGCACAAACGCCCCAGCAGGGCTCTACGACTACACCTATGGCTATGGGGATGACTATCGTGAGGAGACGGAGCTTGGCCCTGCCCTCTCTGCGGAGACTGCCCACTCGGGAGCCGTTGCCCGTGGACCCCGGGGGCTGAAGGGAGAGAAGGGAGAGCCTGCCGTGCTGGAACCTGGCATGCTCGTGGAGGGACCCCCTGGCCCAGAAGGCCCTGCGGGATTGACTGGTCCCCCTGGTATCCAGGGGAACCCAGGCCCAGTTGGAGACCCTGGAGAGAGGGGACCCCCTGGCCGAGCAGGGCTCCCTGGATCTGATGGTGCCCCTGGCCCTCCTGGCACCTCCCTCATGCTCCCATTCCGGTTTGGCAGCAGTGGGGGTGACAAGGGCCCTGTGCTGGCGGCCCAGGAGGCACAGGCCCAGGCAATCCTGCAGCAGGCACGGCTGGCGCTCCGTGGACCCCCTGGCCCGATGGGATACACAGGCCGCCCTGGGCCCTTGGGACAGCCCGGGAGCCCTGGCTTGAAAGGAGAGCTGGGAGACCTAGGGCCCCAGGGCCCCAGAGGACCTCAGGGACTCTCAGGGCCCCCCGGCAAGGCTGGACGGAGGGGCCGAGCGGGTGCTGACGGAGCCCGAGGGATGCCGGGAGAACCTGGGGTGAAGGGTGATCGAGGTTTTGACGGCCTCCCAGGGCTACCTGGGGAGAAGGGGCACAGGGGTGACACTGGCGCCCAGGGCCTTCCTGGGCCCCCTGGAGAGGATGGAGAGCAGGGAGATGATGGGGAGACCGGGCCCCGGGGGCTGCCTGGAGAGTCGGGACCTCGAGGGCTCCTTGGTCCCAAAGGCCCCCCTGGAATTCCTGGGTCCCCGGGAGTCCGAGGCTTGGACGGGCCACACGGGCCCAAAGGCAGCTTGGGACCCCAGGGAGAGCCAGGACCTCCCGGACAGCAGGGCACCCCTGGGACCCAGGGTCTCCCTGGGCCTCAGGGTGCCGTTGGCCCTCGTGGTGAGAAGGGGCCTCAAGGGAAGGCAGGGCTCCCCGGCATGCCTGGCTCAGACGGACTCCCGGGTCATCCCGGGAAGGAAGGTCCTCCTGGAACCAAAGGAAACCAGGGCCCGTCTGGACCTCAGGGTCCTTTAGGATACCCCGGACCTCGAGGTGTCAAGGGTGTGGATGGAATTCGGGGTCTGAAGGGTCACAAAGGTGAAAAGGGCGAGGATGGTTTTTCCGGGTTCAAAGGTGACGTGGGCGTGAAAGGTGACAGGGGTGAGGTCGGAGTTCCTGGCTCCCGGGGAGAAGATGGCCCCGAGGGGCCGAAGGGACGCACGGGACCCACTGGAGACCCTGGGCCCCCTGGACTCATGGGCGAGAAGGGCAAGCTGGGTGTCCCTGGCCTGCCTGGCTACCCTGGACGCCAGGGTCCCAAGGGCTCCCTGGGGTTTCCTGGCTTCCCTGGAGCCAGTGGAGAGAAGGGAGCCCGGGGCCTGTCAGGGAAAGCAGGACCTCGCGGGGAACGAGGGCCCACGGGCCCGCGGGGCCAGCGGGGACCCCGAGGAGCCACTGGCAAGTCTGGAGCTAAGGGAACCTCAGGAGGTGATGGCCCCCACGGGCCCCCCGGAGAGAGGGGCCTCCCTGGACCTCAGGGCCCCAGTGGCTTCCCTGGCCCCAAAGGCCCCCCGGGCCCCCCGGGGAAGGATGGGCTGCCCGGGCACCCAGGCCAGAGAGGAGAAGTGGGCTTCCAAGGGAAGACAGGCCCTCCTGGGCCCCCTGGAGTGGTGGGACCCCAGGGAGCAGCAGGGGAGAGTGGTCCCATGGGGGAGAGAGGTCACCCAGGGCCCCCGGGACCTCCCGGAGAGCAGGGCCTGCCTGGCCCGGCTGGAAAAGAAGGCACAAAGGGTGACCCTGGTCCCCCCGGGGCTCCGGGGAAAGATGGCCCTGCTGGTCTGAGGGGCTTCCCAGGGGAGAGAGGCCTCCCGGGCACTGCTGGTGGGGCTGGTTTGAAGGGGAATGAAGGTCCAGCTGGCCCTCCCGGCCCCGCAGGCTCCCCCGGGGAGCGAGGTGGAGCAGGATCAGGGGGGCCCATCGGTCCCCCAGGGCGCCCAGGCCCCCAGGGTCCCCCAGGAGCAGCGGGTGAGAAAGGCGTCCCGGGGGAGAAGGGCCCTGTTGGTCCCACCGGCCGCGATGGGGTGCAGGGTCCTGTGGGACTTCCTGGCCCTGCTGGACCCCCTGGTGTGGCGGGAGACGATGGTGACAAGGGTGAGGTGGGAGACCCCGGACAGAAGGGCTCCAAGGGGAACAAGGGTGAACACGGCCCTCCTGGCCCTCCTGGCCCCATCGGTCCTGTGGGGCAGCCCGGAGCCGCGGGAGCTGATGGGGAGCCTGGAGCTAGGGGGCCCCAGGGACACTTTGGAGCCAAAGGTGATGAAGGGACAAGAGGATTCAACGGACCCCCAGGACCCATTGGCCTACAGGGCTTGCCAGGCCCCTCTGGGGAGAAAGGAGAAACAGGAGATGTGGGGCCTATGGGACCCCCCGGCCCCCCAGGACCTCGAGGCCCAGCTGGACCCAACGGTGCTGATGGACCCCAAGGCCCCCCCGGAGGTGTTGGCAACCTCGGTCCCCCTGGAGAGAAGGGGGAGCCAGGAGAAGCAGGATCCCCAGGGGTCCAGGGTGAGCCAGGCGTCAAGGGTCTTCGAGGGGAGCGTGGGGAGAAAGGAGAGACAGGGCAGGCGGGAGAGGCTGGGCCACCCGGCCCCAAAGGGCCCGCAGGCGGCGATGGCCCCAAGGGCAGCCCTGGTCCCGTGGGTTTCCCTGGCGACCCCGGCCCCCCTGGAGAAGTCGGCCCTCGGGGCCAGGATGGTGCCAAGGGTGACCGAGGAGAGGACGGCGAGCCAGGCCAGCCCGGCTCCCCTGGTCCCACTGGGGAGAATGGGCCACCTGGACCCCTTGGGAAGCGAGGTCCTGCCGGCACGCCTGGTCCGGAGGGGCGACAGGGAGAGAAGGGAGCCAAGGGGGATCCTGGTGCAGTGGGTGCCCCGGGGAAGACAGGCCCTGTGGGTCCTGCTGGTCCGGCAGGAAAACCCGGCCCTGATGGGCTACGAGGGCTCCCGGGCTCGGTGGGTCAGCAGGGCCGTCCTGGAGCCACAGGCCAGGCTGGGCCCCCGGGTCCTGTGGGACCCCCAGGGCTTCCTGGCCTCCGGGGTGATGCTGGAGCCAAGGGGGAGAAGGGCCACCCAGGTCTCATTGGACTGATTGGCCCCCCTGGAGAGCAAGGGGAGAAGGGTGACCGGGGACTGCCCGGCCCTCAGGGCTCCCCTGGACAGAAGGGAGAGACGGGTGTCACAGGAGCGTCCGGCCCCGTCGGTCCCGGAGGGCCTCCCGGCCTCCCCGGACCTGCTGGCCCCAAAGGAGCCAAAGGAGCCACAGGCCCAGCCGGACCCAAGGGAGAGAAGGGCGCGCAGGGCCCCCCAGGACACCCGGGCCCTCCGGGCGAGGTGATCCAGCCACTGCCCATCCAGATGCCCAAGAAGGTGCGCCGCTCAGTGGACGGCAGCCGCCTGATGCAGGAGGACGAGGCCCTGCCGAGCGGGGGCGCCCCGGGCAGTCCCGGGGGGCTGGAGGAGATCTTCGGCTCGCTGGACTCCCTGCGGGAGGAGATCGAGCAGATGAGGCGGCCGACAGGGACCCAGGCCAGCCCGGCGCGCACCTGCCAGGACCTGAAGCTGTGTCGCCCGGAGCTGCCTGATGGAGAGTACTGGGTGGACCCCAATCAGGGCTGTCCCCGGGATGCCTTCCGGGTCTTCTGCAACTTTACCGCGGGCGGGGAGACGTGTGTGACACCCAGGGATGATGTCACCCAGTTCTCCTACGTGGACTCAGAGGGCTCCCCGGTAGGTGTGGTCCAGCTCACCTTCCTGCGCCTGCTCAGTGTCTCGGCCCACCAGGACGTCTCCTACCCCTGCTCTAAAGCGCCCCTCGACAGCCCCCTGAGACTCCGGGGGGCCAATGAGGATGAGCTGAGCCCCGGGACCAGCCCCTATGTCAAGGAATTCAGAGACGGCTGTCAGACACAGCATGGCCGCAGGGTGCTGGAGGTCCGCACCCCGGTGCTGGAGCAGCTGCCGGTGCTGGATGCCTCCTTCTCAGACCTGGGGGCCCCCCCGAGGCGGGGAGGGGTGCTGCTGGGCCCAGTCTGCTTCATGGGCTAG

Related Sequences

XP_004846894.1 Protein

Col11a2 PREDICTED: collagen alpha-2(XI) chain isoform X1 [Heterocephalus glaber]

Length: 1829 aa      
>XP_004846894.1
MASASALPHTSVRVLLELALGLFQPGADGVRNLNPGRGAPPVDLLRALRFPSLPDGVRRARGVCPADVAYRVSRPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQVPLLTLYSDQGVQQLGLELGRPVRFLYEDQTGRPQPPAQPVFWGLSLADGKWHRVAVAVKGQSVTLIVDCKKRVTRPLPRSARPVLDTRGVVIFGARVLDEEVFEGDVQKLVVVPGVQAAYESCEQKDLECEGSQRERPRNKQSHRAQRSPKQPPSRLHRPQNQEPQRQPPEPLHLDYEPPYDAEKTRGTAPDGQRPQSPNRRAPPSPRGRRTPPRKPNPPAKRSAARQAPPSAGRKPPGAGGSGSAQSQPPPSRPARQAAPPTARAPPRTRGSGYRQYPTPGEEEGAPESSPLPLPEEERTDLQVPPTAEGFLAEEHGEGGTNAPAGLYDYTYGYGDDYREETELGPALSAETAHSGAVARGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLTGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSSGGDKGPVLAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGELGDLGPQGPRGPQGLSGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGEQGDDGETGPRGLPGESGPRGLLGPKGPPGIPGSPGVRGLDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAVGPRGEKGPQGKAGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFSGFKGDVGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKAGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPSGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGESGPMGERGHPGPPGPPGEQGLPGPAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGAGLKGNEGPAGPPGPAGSPGERGGAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPVGPTGRDGVQGPVGLPGPAGPPGVAGDDGDKGEVGDPGQKGSKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGEAGSPGVQGEPGVKGLRGERGEKGETGQAGEAGPPGPKGPAGGDGPKGSPGPVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGETGVTGASGPVGPGGPPGLPGPAGPKGAKGATGPAGPKGEKGAQGPPGHPGPPGEVIQPLPIQMPKKVRRSVDGSRLMQEDEALPSGGAPGSPGGLEEIFGSLDSLREEIEQMRRPTGTQASPARTCQDLKLCRPELPDGEYWVDPNQGCPRDAFRVFCNFTAGGETCVTPRDDVTQFSYVDSEGSPVGVVQLTFLRLLSVSAHQDVSYPCSKAPLDSPLRLRGANEDELSPGTSPYVKEFRDGCQTQHGRRVLEVRTPVLEQLPVLDASFSDLGAPPRRGGVLLGPVCFMG