Details from NCBI annotation

Gene Symbol Rxrb
Gene Name retinoid X receptor, beta, transcript variant X1
Entrez Gene ID 101723696

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RXRB ENSCPOG00000013936 (Guinea pig)

Gene Details

retinoid X receptor, beta

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012558, Guinea pig)

Protein Percentage 97.75%
CDS Percentage 94.51%
Ka/Ks Ratio 0.05124 (Ka = 0.0105, Ks = 0.204)

RXRB ENSG00000204231 (Human)

Gene Details

retinoid X receptor, beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000363817, Human)

Protein Percentage 98.5%
CDS Percentage 93.52%
Ka/Ks Ratio 0.02814 (Ka = 0.0071, Ks = 0.2529)

Rxrb ENSMUSG00000039656 (Mouse)

Gene Details

retinoid X receptor beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036585, Mouse)

Protein Percentage 96.56%
CDS Percentage 91.01%
Ka/Ks Ratio 0.041 (Ka = 0.0161, Ks = 0.3918)

Rxrb ENSRNOG00000000464 (Rat)

Gene Details

retinoid X receptor beta (Rxrb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000040499, Rat)

Protein Percentage 97.33%
CDS Percentage 90.37%
Ka/Ks Ratio 0.02674 (Ka = 0.0123, Ks = 0.4613)

Genome Location

Sequence Coding sequence

Length: 1611 bp    Location: 23606960..23613047   Strand: +
>XM_004846827.1
ATGTCCTGGGCCGCTCGCCCGCCCTTCCTCCCCCAGCGGCATGCCGCAGGGCAGTGTGGGCCGGTGGGGGTGCGAAAAGAAATGCATTGTGGGGTCGCGTCCCGGTGGCGGCGGCGACGGCCCTGGCTGGGTCCCGCGGCGGCAGCGGCGGCGGCGGCGGCAGCAGGAGAACAACAAACCCCGGAGCCGGAGCCGGGGGAGGCTGGACGGGACGGGATGGGCGACAGAGGGCGGGACTCGCGAAGCCCGGACAGCTCCTCTCCAAATCCCCTTCCCCAGGGGGTTCCTCCCCCTTCTCCTGGACCTCCACTGCCCCCTTCAGCCTCATCCCTTGGAGGCTCTGGAGCCCCACCCCCACCCCCAATGCCACCCCCTCCCCTGGGCTCCCCTTTCCCAGTCATCAGTTCTTCCATGGGGTCCCCTGGTCTGCCCCCTCCAGCTCCCCCAGGATTCTCCGGGCCTGTCAGCAGCCCCCAGATTAACTCAACAGTGTCGCTCCCTGGGGGTGGGTCTGGCACCCCTGAAGATGTGAAGCCACCAGTCTTAGGGGTCCGGGGCCTGCACTGTCCACCCCCTCCAGGTGGCCCTGGGGCTGGCAAACGGCTCTGTGCAATCTGCGGGGACCGAAGCTCAGGCAAACACTATGGCGTTTACAGCTGCGAGGGCTGCAAGGGCTTCTTCAAGCGCACTATCCGCAAGGACTTGACCTACTCGTGCCGGGACAACAAAGACTGTACGGTGGACAAGCGCCAGCGGAACCGCTGTCAGTACTGCCGCTATCAGAAGTGCCTGGCCACCGGCATGAAGAGGGAGGCGGTGCAGGAGGAGCGGCAGCGGGGGAAGGACAAGGACGGCGATGGGGAGGGGCCTGGGGGAGCCCCTGAGGAGATGCCCGTGGACAGGATCCTGGAGGCAGAGCTCGCTGTGGAGCAGAAGAGTGATCAGGGCGTTGAGAGTCCCGGGGGAACCGGGGGTAGCGGCGGCAGCAGTCCAAATGACCCCGTGACAAATATCTGTCAGGCAGCTGACAAACAGCTGTTCACCCTTGTTGAGTGGGCGAAGAGGATCCCCCACTTTTCTTCCTTGCCTCTGGATGACCAGGTCATATTGCTACGGGCAGGCTGGAATGAGCTCCTCATCGCCTCCTTCTCCCACCGGTCCATTGATGTCCGGGATGGGATCCTGCTTGCCACGGGCCTCCACGTGCACCGAAACTCGGCCCATTCTGCAGGCGTGGGAGCCATCTTCGACCGGTCCCTCTCCAGGGTGCTGACAGAGCTAGTGTCCAAAATGCGGGACATGAGGATGGACAAGACAGAGCTTGGCTGCCTGCGGGCGATCATTCTGTTTAACCCAGATGCCAAGGGTCTGTCCAACCCCAGCGAGGTGGAGGTCCTGCGGGAGAAAGTGTACGCGTCACTGGAGACCTACTGCAAACAGAAGTACCCTGAGCAGCAGGGACGGTTTGCCAAGCTGCTGCTACGTCTTCCTGCCCTCCGGTCCATCGGCCTTAAGTGTCTAGAGCATCTGTTTTTCTTCAAGCTCATTGGTGACACTCCCATCGACACCTTCCTCATGGAGATGCTCGAGGCTCCCCACCAGTTGGCCTGA

Related Sequences

XP_004846884.1 Protein

Rxrb PREDICTED: retinoic acid receptor RXR-beta isoform X1 [Heterocephalus glaber]

Length: 536 aa      View alignments
>XP_004846884.1
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLGPAAAAAAAAAAGEQQTPEPEPGEAGRDGMGDRGRDSRSPDSSSPNPLPQGVPPPSPGPPLPPSASSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGTPEDVKPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGPGGAPEEMPVDRILEAELAVEQKSDQGVESPGGTGGSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA