Details from NCBI annotation

Gene Symbol Vps52
Gene Name vacuolar protein sorting 52 homolog (S. cerevisiae)
Entrez Gene ID 101722763

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VPS52 ENSCPOG00000013947 (Guinea pig)

Gene Details

vacuolar protein sorting 52 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012568, Guinea pig)

Protein Percentage 99.03%
CDS Percentage 94.1%
Ka/Ks Ratio 0.01778 (Ka = 0.0045, Ks = 0.2527)

VPS52 ENSG00000223501 (Human)

Gene Details

vacuolar protein sorting 52 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000409952, Human)

Protein Percentage 98.76%
CDS Percentage 92.67%
Ka/Ks Ratio 0.01923 (Ka = 0.006, Ks = 0.3103)

Vps52 ENSMUSG00000024319 (Mouse)

Gene Details

vacuolar protein sorting 52 (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025178, Mouse)

Protein Percentage 97.93%
CDS Percentage 88.98%
Ka/Ks Ratio 0.01714 (Ka = 0.0108, Ks = 0.6297)

Vps52 ENSRNOG00000000470 (Rat)

Gene Details

vacuolar protein sorting 52 homolog (S. cerevisiae) (Vps52), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000549, Rat)

Protein Percentage 97.93%
CDS Percentage 88.7%
Ka/Ks Ratio 0.01605 (Ka = 0.0107, Ks = 0.6668)

Genome Location

Sequence Coding sequence

Length: 2172 bp    Location: 23548995..23563587   Strand: +
>XM_004846824.1
ATGGCCGCCGCTGCGACCATGGCGGCAGCTGCCCGGGAGTTGGTGTTGCGGGCTGGGGCTTCAGATCTGGAGGAAGAGGAGGGTCCGCTGGGAGGTGGTCCTGGGCTCCAGGAGCCACTGCAACTTGGGAAGTTGGATATCACCTCTGATGAATTCATCCTGGATGAAGTAGATGTTCACATTCAGGCGAATCTGGAGGATGAGTTAGTGAAGGAAGCTCTCAAAACGGGTGTGGATCTCCGTCACTATTCAAAGCAGGTTGAGCTGGAGTTGCAGCAGATAGAGCAGAAGTCCATTCGGGATTACATCCAGGAGAGCGAGAACATCGCGTCTCTGCACAACCAGATCACAGCCTGCGATGCTGTCCTGGAGCGCATGGAGCAGATGCTGGGAGCATTTCAAAGTGACCTCAGCTCCATCAGCTCCGAGATCCGGACCCTGCAGGAGCAGTCAGGAGCCATGAACATTCGACTGCGAAATCGCCAGGCAGTTCGGGGGAAACTTGGGGAGCTAGTTGATGGTCTGGTGGTGCCCTCTGCTCTGGTCACGGCAATTCTGGAGGCTCCAGTGACAGAGCCCAGGTTCCTGGAGCAGCTGCAGGAGCTGGATGCCAAGGCAGCTGCAGTCAGAGAGCAGGAAGCCAGAGGCACAGCGGCCTGTGCAGATGTCAGAGGCGTGCTAGACCGGCTCCGGGTCAAGGCAGTGACGAAGATCCGAGAATTTATTCTCCAGAAGATTTATTCATTCAGAAAACCAATGACCAACTACCAGATCCCCCAGACAGCCCTGCTGAAGTACAGGTTCTTCTATCAGTTCCTCCTGGGCAATGAACGAGCAACAGCGAAGGAGATCAGGGACGAATATGTGGAGACGCTGAGCAAGATCTACCTGTCTTACTACCGCTCTTACCTGGGGAGGCTCATGAAGGTGCAGTATGAGGAAGTTGCTGAGAAGGATGATCTCATGGGCATGGAAGATACAGCAAAGAAAGGATTCTTCTCAAAGCCATCACTCCGCAGCAGGAACACCATCTTCACCCTGGGCACCCGTGGCTCTGTCATCTCCCCCACTGAGCTTGAGGCCCCCATCCTGGTGCCCCACACAGCCCAGCGGGGAGAGCAGAGGTATCCATTTGAAGCCCTCTTCCGCAGCCAGCACTATGCCCTCCTAGACAATTCCTGCCGTGAATATCTTTTCATCTGTGAATTTTTTGTTGTGTCTGGCCCAGCTGCCCATGACCTATTTCATGCTGTCATGGGTCGAACCCTCAGCATGACCCTGAAACACCTGGAGTCCTATCTGGCCGACTGCTACGATGCCATTGCTGTTTTTCTCTGTATCCACATTGTTCTCCGTTTCCGCAACATTGCAGCAAAGAGGGAGGTCCCGGCCCTGGACAGGTACTGGGAACAGGTGCTTGCCTTGCTGTGGCCACGGTTCGAGCTGATCCTGGAGATGAATGTCCAGAGTGTGCGAAGCACTGACCCCCAGCGCCTTGGTGGGCTGGATACTCGGCCTCACTATATCACACGCCGGTACGCAGAGTTCTCCTCTGCCCTTGTCAGCATCAACCAGACAATTCCCAATGAGCGGACCATGCAGCTGCTGGGACAGCTACAGGTGGAGGTGGAGAATTTTGTCCTCCGAGTGGCAGCTGAATTCTCCTCCCGGAAGGAGCAACTTGTGTTTTTGATCAACAACTATGACATGATGCTGGGTGTGCTGATGGAGCGGGCTACAGATGACAGCAAAGAGGTTGAGAGTTTCCAGCAGCTGCTCAATGCTCGGACACAGGAATTCATCGAAGAGTTGTTGTCTCCTCCCTTTGGGGGTCTGGTGGCATTTGTGAAGGAGGCTGAGGCTTTGATTGAGCGTGGACAGGCTGAGCGACTTCGAGGGGAGGAAGCTCGGGTAACTCAGCTGATCCGTGGTTTCGGTAGCTCCTGGAAATCATCGGTGGAGTCGCTGAGTCAGGACGTGATGCGGAGTTTCACCAATTTCAGAAATGGAACCAGTATCATCCAGGGAGCACTGACCCAACTGATTCAGGTTTATCATCGCTTCCACCGGGTGCTGTCCCAGCCCCAGCTTCGGGCCCTACCTGCCAGGGCTGAGCTCATCAACATCCACCACCTTATGGTGGAGCTCAAGAAACACAAGCCCAACTTCTGA

Related Sequences

XP_004846881.1 Protein

Vps52 PREDICTED: vacuolar protein sorting-associated protein 52 homolog [Heterocephalus glaber]

Length: 723 aa      View alignments
>XP_004846881.1
MAAAATMAAAARELVLRAGASDLEEEEGPLGGGPGLQEPLQLGKLDITSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSALVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGMEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPTELEAPILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGPAAHDLFHAVMGRTLSMTLKHLESYLADCYDAIAVFLCIHIVLRFRNIAAKREVPALDRYWEQVLALLWPRFELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQVEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERATDDSKEVESFQQLLNARTQEFIEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDVMRSFTNFRNGTSIIQGALTQLIQVYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHKPNF