Details from NCBI annotation

Gene Symbol Phf1
Gene Name PHD finger protein 1, transcript variant X6
Entrez Gene ID 101713089

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PHF1 ENSCPOG00000008751 (Guinea pig)

Gene Details

PHD finger protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007856, Guinea pig)

Protein Percentage 95.23%
CDS Percentage 92.46%
Ka/Ks Ratio 0.0886 (Ka = 0.0241, Ks = 0.2715)

PHF1 ENSG00000112511 (Human)

Gene Details

PHD finger protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000363640, Human)

Protein Percentage 94.36%
CDS Percentage 91.65%
Ka/Ks Ratio 0.10937 (Ka = 0.03, Ks = 0.274)

Phf1 ENSMUSG00000024193 (Mouse)

Gene Details

PHD finger protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000073402, Mouse)

Protein Percentage 92.67%
CDS Percentage 88.91%
Ka/Ks Ratio 0.09166 (Ka = 0.0376, Ks = 0.4105)

Phf1 ENSRNOG00000000480 (Rat)

Gene Details

PHD finger protein 1 (Phf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056303, Rat)

Protein Percentage 92.68%
CDS Percentage 88.99%
Ka/Ks Ratio 0.09414 (Ka = 0.0388, Ks = 0.4121)

Genome Location

Sequence Coding sequence

Length: 1710 bp    Location: 23404261..23400338   Strand: -
>XM_004846793.1
ATGGCGCAGCCCCCCCGGCTGAGCCGCTCCGGAGCCCCCTCTCTTTGGGACCCCGCTTCTTCTGCTCCCACCTCGGGCCCCAGGCCTCGACTTTGGGAGGGGCAGGATGTCCTGGCCAGATGGACTGATGGGCTGCTGTACTTGGGCACCGTCAAGAAGGTGGACAGCGCCCGGGAGGTGTGTCTGGTCCAGTTTGAGGACGATTCCCAGTTTCTGGTTCTGTGGAAAGACATCAGCCCTGCTGCCCTCCCTGGGGAGGAGCTCCTCTGCTGTGTCTGTCGCTCTGAGAATGTGGTTCCTGGGAACCGGCTGGTCAGCTGTGAAAAGTGTCGCCATGCTTATCACCAGGACTGCCACGTTCCCAGGGCCCCGGCCCCTGGAGAAGGAGAGGGCGCATCCTGGGTCTGCCGCCAGTGTGTCTTTGCCATCGCCACCAAGAGGGGGGGTGCGCTGAAGAAGGGTCCCTATGCCCGGGCCATGCTGGGCATGAAGCTGTCTCTGCCATATGGATTGAAGGGGCTGGACTGGGACGCCGGGCACCTGAGCAACCGGCAGCAGAGCTACTGTTACTGTGGTGGCCCTGGGGAGTGGAACCTGAAGATGCTGCAGTGCCGGAGCTGCCTGCAGTGGTTCCATGAGGCCTGCACCCAGTGTCTGAGCAAGCCCCTCCTGTACGGGGACAGGTTCTATGAGTTCGAATGCTGTGTGTGCCTCGGGGGCCCCGAGAAGGTCCGGAGGCTGCAGCTTCGCTGGGTGGACGTGGCCCATCTTGTCCTCTATCATCTCAGTGTCTGCTGTAAGAAGAAATATTTCGACTTTGACCGTGAGATCCTGCCCTTCACCTCTGAGAACTGGGATAGTCTGCTCCTGGGCGAGCTTTCAGACACCCCCAAGGGAGAACGTTCTTCCAAACTCCTCTCTGCTCTTAACAGCCACAAAGACCGTTTCATTTCAGGGAGAGAGATTAAGAAGAGGAAATGCTTGTTTGGTCTCCACGCGAGGGCCCCTCCTCCTGTGGAGCACCCTCACGGAGATGGAGCCCCCACCAGCTTCCCTTCAGGGCAGGGCCCTGGGGGAGGGGTCTCACGTCCCCTGGGGAAGCGACGGAGGCCGGAGCCAGAGCCCCTGAGGAGGAGGCAGAAGGAGAAGGTGGAAGAGCTGGGGCCGCCCTCGGCAGTGCACAACCAGCCCGAGTCCCGGCAGCAGAGGGAGCGGGCTCAGCTGCAGGGGGCGCTGCAGGCCTCAGTGTCTCCATCACCCTCCAGCCCTGACCAGAGTTACCAGGGCGGCAGCGGCTACAACTTCCGGCCCACAGACGCCCGCTGTCTGCCCAGCAGCCCCATCCGGATGTTCGCTTCCTTCCACCCCTCTGCCAGCACCGCAGGGACCTCTGGGGACAGTGAACCCCCAGACAGGTCACCCCTTGAACTCCACATCGGCTTCCCCACAGACATCCCTAAAAGCACCCCCTCCTCGATGACTGCCTCTCCTTCCTCAGGCTCAGGCCCAGCCCCCTCCCCAGGCCTTCCCAGACGCTCCACACTCCCTTCTCCCTTGTGCCGTGGTTTGTCTCCAGGGACTGGGGGAGGAGTCCGAGGTGGGGTTGGCTACCTGTCCCGAGGGGACCCCGTCCGGGTCCTTGCTCGGCGAGTACGACCTGATGGCTCTGTGCAGTACCTAGTAGAGTGGGGAGGAGGGGGCATCTTCTGA

Related Sequences

XP_004846850.1 Protein

Phf1 PREDICTED: PHD finger protein 1 isoform X6 [Heterocephalus glaber]

Length: 569 aa      View alignments
>XP_004846850.1
MAQPPRLSRSGAPSLWDPASSAPTSGPRPRLWEGQDVLARWTDGLLYLGTVKKVDSAREVCLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSENVVPGNRLVSCEKCRHAYHQDCHVPRAPAPGEGEGASWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGHLSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCLGGPEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGERSSKLLSALNSHKDRFISGREIKKRKCLFGLHARAPPPVEHPHGDGAPTSFPSGQGPGGGVSRPLGKRRRPEPEPLRRRQKEKVEELGPPSAVHNQPESRQQRERAQLQGALQASVSPSPSSPDQSYQGGSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDSEPPDRSPLELHIGFPTDIPKSTPSSMTASPSSGSGPAPSPGLPRRSTLPSPLCRGLSPGTGGGVRGGVGYLSRGDPVRVLARRVRPDGSVQYLVEWGGGGIF